RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 BCL2P10415 239 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 EGR2P11161 476 aaPredicted RBP6.34□□□□□ -1.39
HTT-209ENST00000512068 ORM2P19652 201 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 GATA2P23769 480 aaPredicted RBP6.34□□□□□ -1.39
HTT-209ENST00000512068 CRIP2P52943 208 aaPredicted RBP6.34□□□□□ -1.39
HTT-209ENST00000512068 CEBPGP53567 150 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 SLC35B1P78383 322 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 ZNF90Q03938 601 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 ATP5G2Q06055 141 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 ZNF726P1Q15940 193 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 C15orf32Q32M92 178 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 TIGITQ495A1 244 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 GCSAMLQ5JQS6 135 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 ZNF506Q5JVG8 444 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 SPSB3Q6PJ21 355 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 PQLC2Q6ZP29 291 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 IL17RELQ6ZVW7 336 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 FAM223AQ8IWN6 122 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 NECAP1Q8NC96 275 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 OR51G1Q8NGK1 321 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 RXFP4Q8TDU9 374 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 Q8WTZ3 238 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 ZNF48Q96MX3 618 aaPredicted RBP6.34□□□□□ -1.39
HTT-209ENST00000512068 LINC00052Q96N35 136 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 SLC35B3Q9H1N7 401 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 GNB4Q9HAV0 340 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 TMEM167BQ9NRX6 74 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 VAX2Q9UIW0 290 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 RNF24Q9Y225 148 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 HIGD1AQ9Y241 93 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 TENM4Q6N022 2769 aa6.34□□□□□ -1.4
HTT-209ENST00000512068 CENPEQ02224 2701 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 TRBV7-1A0A0A6YYK4 115 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 A0A0G2JLM5 398 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 LOC102723971A0A1B0GUV8 181 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 NDUFB8O95169 186 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 TOMM40O96008 361 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 APOC3P02656 99 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 HSPB1P04792 205 aaKnown RBP6.33□□□□□ -1.4
HTT-209ENST00000512068 IGF1P05019 195 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 CD5P06127 495 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 IGLC1P0CG04 106 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 STAG3L2P0CL84 134 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 STAG3L3P0CL85 134 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 ARL14EPLP0DKL9 152 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 C8orf88P0DMB2 117 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 PF4V1P10720 104 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 TPPP2P59282 170 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 DEFA5Q01523 94 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 CST9LP1Q5W188 147 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 SSX7Q7RTT5 188 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 CCDC28AQ8IWP9 274 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 SVBPQ8N300 66 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 TMEM86BQ8N661 226 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 SIGLECL1Q8N7X8 197 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 LINC00482Q8N8I6 264 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 STXBP6Q8NFX7 210 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 MS4A10Q96PG2 267 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 SEC11CQ9BY50 192 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 MRPL36Q9P0J6 103 aaKnown RBP6.33□□□□□ -1.4
HTT-209ENST00000512068 DMRT1Q9Y5R6 373 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 S4R3C0 116 aa6.33□□□□□ -1.4
HTT-209ENST00000512068 FBN2P35556 2912 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 IGKV1D-37A0A075B6S9 117 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 OR2T8A6NH00 312 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 EIF3GO75821 320 aaKnown RBP eCLIP6.32□□□□□ -1.4
HTT-209ENST00000512068 IGHV3-23P01764 117 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 AMY1AP04745 511 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 IL4P05112 153 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 CRYBA1P05813 215 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 PSG1P11464 419 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 GCHFRP30047 84 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 GPR183P32249 361 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 YPEL3P61236 119 aaPredicted RBP6.32□□□□□ -1.4
HTT-209ENST00000512068 BLCAPP62952 87 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 UBE2L3P68036 154 aaKnown RBP6.32□□□□□ -1.4
HTT-209ENST00000512068 CCL20P78556 96 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 RELQ04864 619 aaPredicted RBP6.32□□□□□ -1.4
HTT-209ENST00000512068 SOHLH1Q5JUK2 328 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 FAM209BQ5JX69 171 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 MIR17HGQ75NE6 70 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 LINC00305Q7Z4B0 112 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 OR5AU1Q8NGC0 362 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 OR4F5Q8NH21 305 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 USMG5Q96IX5 58 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 UHRF2Q96PU4 802 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 OR4F4Q96R69 305 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 RARRES2Q99969 163 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 TXNDC17Q9BRA2 123 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 SEPSECSQ9HD40 501 aaKnown RBP6.32□□□□□ -1.4
HTT-209ENST00000512068 LINC00527Q9UJ94 153 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 TACC2O95359 2948 aa6.32□□□□□ -1.4
HTT-209ENST00000512068 CCDC168Q8NDH2 2452 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 TRBV9A0A0B4J1U6 114 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 LINC01548A6NM66 108 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 C11orf94C9JXX5 98 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 F6UZH7 168 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 BMPR1BO00238 502 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 PDE6DO43924 150 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 PAGE4O60829 102 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms