RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 PRR25Q96S07 402 aa9.72□□□□□ -0.85
COL6A6-203ENST00000511332 SLC25A31Q9H0C2 315 aa9.72□□□□□ -0.85
COL6A6-203ENST00000511332 NPVFQ9HCQ7 196 aa9.72□□□□□ -0.85
COL6A6-203ENST00000511332 SMPXQ9UHP9 88 aa9.72□□□□□ -0.85
COL6A6-203ENST00000511332 DNAH3Q8TD57 4116 aa9.72□□□□□ -0.85
COL6A6-203ENST00000511332 IGKV1OR2-108A0A075B7D4 117 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 A0A1W2PS18 150 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 IGSF23A1L1A6 192 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 FAM24AA6NFZ4 105 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 CHEK1O14757 476 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 CST7O76096 145 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 CD5P06127 495 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 PSG1P11464 419 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 CRYBB3P26998 211 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 S100A11P31949 105 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 ZNF90Q03938 601 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 BAXQ07812 192 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 TEPPQ6URK8 271 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 RBPMS2Q6ZRY4 209 aaKnown RBP9.71□□□□□ -0.86
COL6A6-203ENST00000511332 TMEM61Q8N0U2 210 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 MRAPQ8TCY5 172 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 RNF125Q96EQ8 232 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 GRAMD2BQ96HH9 432 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 RHPN1-AS1Q9BWJ2 59 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 OR5AC2Q9NZP5 309 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 PFDN2Q9UHV9 154 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 RABAC1Q9UI14 185 aa9.71□□□□□ -0.86
COL6A6-203ENST00000511332 WI2-2373I1.2A0A1W2PRP0 233 aa9.7□□□□□ -0.86
COL6A6-203ENST00000511332 IZUMO1RA6ND01 250 aa9.7□□□□□ -0.86
COL6A6-203ENST00000511332 HNRNPCP07910 306 aaKnown RBP eCLIP9.7□□□□□ -0.86
COL6A6-203ENST00000511332 GIPP09681 153 aaPredicted RBP9.7□□□□□ -0.86
COL6A6-203ENST00000511332 SELENOTP62341 195 aa9.7□□□□□ -0.86
COL6A6-203ENST00000511332 FGL1Q08830 312 aa9.7□□□□□ -0.86
COL6A6-203ENST00000511332 ARL16Q0P5N6 197 aa9.7□□□□□ -0.86
COL6A6-203ENST00000511332 GUCA2BQ16661 112 aa9.7□□□□□ -0.86
COL6A6-203ENST00000511332 TMEM217Q8N7C4 229 aa9.7□□□□□ -0.86
COL6A6-203ENST00000511332 BPIFCQ8NFQ6 507 aa9.7□□□□□ -0.86
COL6A6-203ENST00000511332 WDR89Q96FK6 387 aaPredicted RBP9.7□□□□□ -0.86
COL6A6-203ENST00000511332 SPAG8Q99932 426 aaPredicted RBP9.7□□□□□ -0.86
COL6A6-203ENST00000511332 TMEM147Q9BVK8 224 aa9.7□□□□□ -0.86
COL6A6-203ENST00000511332 VSIRQ9H7M9 311 aa9.7□□□□□ -0.86
COL6A6-203ENST00000511332 UQCC1Q9NVA1 299 aa9.7□□□□□ -0.86
COL6A6-203ENST00000511332 IGHV3-49A0A0A0MS15 119 aa9.69□□□□□ -0.86
COL6A6-203ENST00000511332 H0YIZ8 118 aa9.69□□□□□ -0.86
COL6A6-203ENST00000511332 K7EIL1 84 aa9.69□□□□□ -0.86
COL6A6-203ENST00000511332 TSPAN4O14817 238 aa9.69□□□□□ -0.86
COL6A6-203ENST00000511332 S100A7P31151 101 aa9.69□□□□□ -0.86
COL6A6-203ENST00000511332 EIF2B2P49770 351 aaKnown RBP9.69□□□□□ -0.86
COL6A6-203ENST00000511332 RAP2BP61225 183 aa9.69□□□□□ -0.86
COL6A6-203ENST00000511332 LYZP61626 148 aa9.69□□□□□ -0.86
COL6A6-203ENST00000511332 EWSR1Q01844 656 aaKnown RBP eCLIP9.69□□□□□ -0.86
COL6A6-203ENST00000511332 OR2F1Q13607 317 aa9.69□□□□□ -0.86
COL6A6-203ENST00000511332 USF2Q15853 346 aaPredicted RBP9.69□□□□□ -0.86
COL6A6-203ENST00000511332 VWC2Q2TAL6 325 aa9.69□□□□□ -0.86
COL6A6-203ENST00000511332 CYP2G1PQ6ZSU1 146 aa9.69□□□□□ -0.86
COL6A6-203ENST00000511332 ZNF546Q86UE3 836 aa9.69□□□□□ -0.86
COL6A6-203ENST00000511332 THAP6Q8TBB0 222 aa9.69□□□□□ -0.86
COL6A6-203ENST00000511332 ST8SIA2Q92186 375 aa9.69□□□□□ -0.86
COL6A6-203ENST00000511332 RNF2Q99496 336 aa9.69□□□□□ -0.86
COL6A6-203ENST00000511332 PBDC1Q9BVG4 233 aa9.69□□□□□ -0.86
COL6A6-203ENST00000511332 MBD2Q9UBB5 411 aa9.69□□□□□ -0.86
COL6A6-203ENST00000511332 IGHV3OR16-13A0A075B7E8 117 aa9.68□□□□□ -0.86
COL6A6-203ENST00000511332 IGHV3-74A0A0B4J1X5 117 aa9.68□□□□□ -0.86
COL6A6-203ENST00000511332 UBE2L5PA0A1B0GUS4 154 aa9.68□□□□□ -0.86
COL6A6-203ENST00000511332 RAB31Q13636 194 aa9.68□□□□□ -0.86
COL6A6-203ENST00000511332 ATP6V1FQ16864 119 aa9.68□□□□□ -0.86
COL6A6-203ENST00000511332 SLC45A2Q9UMX9 530 aa9.68□□□□□ -0.86
COL6A6-203ENST00000511332 LSM4Q9Y4Z0 139 aaKnown RBP9.68□□□□□ -0.86
COL6A6-203ENST00000511332 SELENOKQ9Y6D0 94 aa9.68□□□□□ -0.86
COL6A6-203ENST00000511332 OR4C46A6NHA9 309 aa9.67□□□□□ -0.86
COL6A6-203ENST00000511332 ZNF785A8K8V0 405 aa9.67□□□□□ -0.86
COL6A6-203ENST00000511332 APOHP02749 345 aaPredicted RBP9.67□□□□□ -0.86
COL6A6-203ENST00000511332 LYL1P12980 280 aa9.67□□□□□ -0.86
COL6A6-203ENST00000511332 CD81P60033 236 aa9.67□□□□□ -0.86
COL6A6-203ENST00000511332 TCF24Q7RTU0 167 aa9.67□□□□□ -0.86
COL6A6-203ENST00000511332 S100A7AQ86SG5 101 aa9.67□□□□□ -0.86
COL6A6-203ENST00000511332 OR5C1Q8NGR4 320 aa9.67□□□□□ -0.86
COL6A6-203ENST00000511332 PPP1R14BQ96C90 147 aa9.67□□□□□ -0.86
COL6A6-203ENST00000511332 RNF126Q9BV68 326 aa9.67□□□□□ -0.86
COL6A6-203ENST00000511332 WDR83OSQ9Y284 106 aa9.67□□□□□ -0.86
COL6A6-203ENST00000511332 SMAD5-AS1Q9Y6J3 95 aa9.67□□□□□ -0.86
COL6A6-203ENST00000511332 U3KQE9 123 aa9.67□□□□□ -0.86
COL6A6-203ENST00000511332 IGHV3-66A0A0C4DH42 116 aa9.66□□□□□ -0.86
COL6A6-203ENST00000511332 HELTA6NFD8 242 aa9.66□□□□□ -0.86
COL6A6-203ENST00000511332 AGPAT2O15120 278 aa9.66□□□□□ -0.86
COL6A6-203ENST00000511332 MPDU1O75352 247 aa9.66□□□□□ -0.86
COL6A6-203ENST00000511332 LINC00869P0C866 280 aa9.66□□□□□ -0.86
COL6A6-203ENST00000511332 RPL12P30050 165 aaKnown RBP9.66□□□□□ -0.86
COL6A6-203ENST00000511332 PAFAH1B2P68402 229 aa9.66□□□□□ -0.86
COL6A6-203ENST00000511332 NHLH2Q02577 135 aa9.66□□□□□ -0.86
COL6A6-203ENST00000511332 PXDC1Q5TGL8 231 aa9.66□□□□□ -0.86
COL6A6-203ENST00000511332 MGST2Q99735 147 aa9.66□□□□□ -0.86
COL6A6-203ENST00000511332 FBXL17Q9UF56 701 aa9.66□□□□□ -0.86
COL6A6-203ENST00000511332 HSPB11Q9Y547 144 aa9.66□□□□□ -0.86
COL6A6-203ENST00000511332 BUB3O43684 328 aa9.65□□□□□ -0.86
COL6A6-203ENST00000511332 DFFBO76075 338 aa9.65□□□□□ -0.86
COL6A6-203ENST00000511332 CAMLGP49069 296 aa9.65□□□□□ -0.86
COL6A6-203ENST00000511332 RPL11P62913 178 aaKnown RBP9.65□□□□□ -0.86
COL6A6-203ENST00000511332 DEFB121Q5J5C9 76 aa9.65□□□□□ -0.86
COL6A6-203ENST00000511332 C1orf194Q5T5A4 169 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms