RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 OR8G2PQ6IF36 304 aa10.4□□□□□ -0.74
DDX41-212ENST00000511040 NARS2Q96I59 477 aaKnown RBP10.4□□□□□ -0.74
DDX41-212ENST00000511040 SMIM8Q96KF7 97 aa10.4□□□□□ -0.74
DDX41-212ENST00000511040 PBDC1Q9BVG4 233 aa10.4□□□□□ -0.74
DDX41-212ENST00000511040 MS4A6AQ9H2W1 248 aa10.4□□□□□ -0.74
DDX41-212ENST00000511040 TMEM231Q9H6L2 316 aa10.4□□□□□ -0.74
DDX41-212ENST00000511040 RCL1Q9Y2P8 373 aaKnown RBP10.4□□□□□ -0.74
DDX41-212ENST00000511040 IGKV1OR2-108A0A075B7D4 117 aa10.39□□□□□ -0.75
DDX41-212ENST00000511040 A0A1W2PS18 150 aa10.39□□□□□ -0.75
DDX41-212ENST00000511040 DNASE2O00115 360 aaPredicted RBP10.39□□□□□ -0.75
DDX41-212ENST00000511040 IL5P05113 134 aa10.39□□□□□ -0.75
DDX41-212ENST00000511040 METTL15P1P0C7V9 234 aa10.39□□□□□ -0.75
DDX41-212ENST00000511040 ZNF124Q15973 351 aa10.39□□□□□ -0.75
DDX41-212ENST00000511040 ACOT7LQ6ZUV0 252 aa10.39□□□□□ -0.75
DDX41-212ENST00000511040 APRG1Q8IVJ8 170 aa10.39□□□□□ -0.75
DDX41-212ENST00000511040 WWC2-AS2Q96NR7 200 aa10.39□□□□□ -0.75
DDX41-212ENST00000511040 RABAC1Q9UI14 185 aa10.39□□□□□ -0.75
DDX41-212ENST00000511040 LSM5Q9Y4Y9 91 aaKnown RBP10.39□□□□□ -0.75
DDX41-212ENST00000511040 U3KQE9 123 aa10.39□□□□□ -0.75
DDX41-212ENST00000511040 SMCO3A2RU48 225 aa10.38□□□□□ -0.75
DDX41-212ENST00000511040 LYZP61626 148 aa10.38□□□□□ -0.75
DDX41-212ENST00000511040 RRAS2P62070 204 aaPredicted RBP10.38□□□□□ -0.75
DDX41-212ENST00000511040 PAFAH1B2P68402 229 aa10.38□□□□□ -0.75
DDX41-212ENST00000511040 AKR1C1Q04828 323 aa10.38□□□□□ -0.75
DDX41-212ENST00000511040 FAM24BQ8N5W8 94 aa10.38□□□□□ -0.75
DDX41-212ENST00000511040 THAP8Q8NA92 274 aa10.38□□□□□ -0.75
DDX41-212ENST00000511040 STXBP6Q8NFX7 210 aa10.38□□□□□ -0.75
DDX41-212ENST00000511040 RNF125Q96EQ8 232 aa10.38□□□□□ -0.75
DDX41-212ENST00000511040 GRAMD2BQ96HH9 432 aa10.38□□□□□ -0.75
DDX41-212ENST00000511040 C2orf50Q96LR7 162 aa10.38□□□□□ -0.75
DDX41-212ENST00000511040 RAB40CQ96S21 281 aa10.38□□□□□ -0.75
DDX41-212ENST00000511040 TRGV9Q99603 122 aa10.38□□□□□ -0.75
DDX41-212ENST00000511040 FAM110AQ9BQ89 295 aa10.38□□□□□ -0.75
DDX41-212ENST00000511040 SPATA25Q9BR10 227 aa10.38□□□□□ -0.75
DDX41-212ENST00000511040 GGTLC1Q9BX51 225 aa10.38□□□□□ -0.75
DDX41-212ENST00000511040 LOC102724200A0A096LPH7 203 aaPredicted RBP10.37□□□□□ -0.75
DDX41-212ENST00000511040 PMS2P5A8MQ11 134 aa10.37□□□□□ -0.75
DDX41-212ENST00000511040 INMT-MINDY4F8WBC2 141 aa10.37□□□□□ -0.75
DDX41-212ENST00000511040 K7EPK0 472 aa10.37□□□□□ -0.75
DDX41-212ENST00000511040 L7N2F9 121 aa10.37□□□□□ -0.75
DDX41-212ENST00000511040 CD5P06127 495 aa10.37□□□□□ -0.75
DDX41-212ENST00000511040 RPL35AP18077 110 aaKnown RBP10.37□□□□□ -0.75
DDX41-212ENST00000511040 DEFA1P59665 94 aa10.37□□□□□ -0.75
DDX41-212ENST00000511040 DEFA3P59666 94 aa10.37□□□□□ -0.75
DDX41-212ENST00000511040 VAMP2P63027 116 aa10.37□□□□□ -0.75
DDX41-212ENST00000511040 C16orf54Q6UWD8 224 aa10.37□□□□□ -0.75
DDX41-212ENST00000511040 GSG1LQ6UXU4 331 aa10.37□□□□□ -0.75
DDX41-212ENST00000511040 MAP6D1Q9H9H5 199 aa10.37□□□□□ -0.75
DDX41-212ENST00000511040 GPN1Q9HCN4 374 aaPredicted RBP10.37□□□□□ -0.75
DDX41-212ENST00000511040 C7orf66A4D0T2 115 aa10.36□□□□□ -0.75
DDX41-212ENST00000511040 SIX6O95475 246 aa10.36□□□□□ -0.75
DDX41-212ENST00000511040 FABP1P07148 127 aa10.36□□□□□ -0.75
DDX41-212ENST00000511040 GATA2P23769 480 aaPredicted RBP10.36□□□□□ -0.75
DDX41-212ENST00000511040 S100A10P60903 97 aa10.36□□□□□ -0.75
DDX41-212ENST00000511040 TMEM14EPQ6UXP3 125 aa10.36□□□□□ -0.75
DDX41-212ENST00000511040 TMEM182Q6ZP80 229 aaPredicted RBP10.36□□□□□ -0.75
DDX41-212ENST00000511040 GLMPQ8WWB7 406 aa10.36□□□□□ -0.75
DDX41-212ENST00000511040 NBEAL2Q6ZNJ1 2754 aa10.35□□□□□ -0.75
DDX41-212ENST00000511040 SNRPGP15A8MWD9 76 aa10.35□□□□□ -0.75
DDX41-212ENST00000511040 GOSR2O14653 212 aa10.35□□□□□ -0.75
DDX41-212ENST00000511040 TSC22D2O75157 780 aa10.35□□□□□ -0.75
DDX41-212ENST00000511040 EIF2B2P49770 351 aaKnown RBP10.35□□□□□ -0.75
DDX41-212ENST00000511040 BCAP31P51572 246 aa10.35□□□□□ -0.75
DDX41-212ENST00000511040 TAS2R30P59541 319 aa10.35□□□□□ -0.75
DDX41-212ENST00000511040 DEFB131AP59861 70 aa10.35□□□□□ -0.75
DDX41-212ENST00000511040 ARL16Q0P5N6 197 aa10.35□□□□□ -0.75
DDX41-212ENST00000511040 LEMD1Q68G75 181 aa10.35□□□□□ -0.75
DDX41-212ENST00000511040 STPG3Q8N7X2 389 aa10.35□□□□□ -0.75
DDX41-212ENST00000511040 TENM3Q9P273 2699 aa10.34□□□□□ -0.75
DDX41-212ENST00000511040 HELTA6NFD8 242 aa10.34□□□□□ -0.75
DDX41-212ENST00000511040 K7EQG2 157 aa10.34□□□□□ -0.75
DDX41-212ENST00000511040 BUB3O43684 328 aa10.34□□□□□ -0.75
DDX41-212ENST00000511040 ZNF688P0C7X2 276 aa10.34□□□□□ -0.75
DDX41-212ENST00000511040 CMC4P56277 68 aaPredicted RBP10.34□□□□□ -0.75
DDX41-212ENST00000511040 DLK1P80370 383 aa10.34□□□□□ -0.75
DDX41-212ENST00000511040 TMEM144Q7Z5S9 345 aa10.34□□□□□ -0.75
DDX41-212ENST00000511040 OR10P1Q8NGE3 313 aa10.34□□□□□ -0.75
DDX41-212ENST00000511040 PPP1R14BQ96C90 147 aa10.34□□□□□ -0.75
DDX41-212ENST00000511040 MARVELD1Q9BSK0 173 aa10.34□□□□□ -0.75
DDX41-212ENST00000511040 TRAV2A0A0B4J234 112 aa10.33□□□□□ -0.76
DDX41-212ENST00000511040 FAM24AA6NFZ4 105 aa10.33□□□□□ -0.76
DDX41-212ENST00000511040 PRAF2O60831 178 aa10.33□□□□□ -0.76
DDX41-212ENST00000511040 CAV2P51636 162 aa10.33□□□□□ -0.76
DDX41-212ENST00000511040 RAB32Q13637 225 aa10.33□□□□□ -0.76
DDX41-212ENST00000511040 SIGLEC15Q6ZMC9 328 aa10.33□□□□□ -0.76
DDX41-212ENST00000511040 CYP2G1PQ6ZSU1 146 aa10.33□□□□□ -0.76
DDX41-212ENST00000511040 DCANP1Q8TF63 244 aa10.33□□□□□ -0.76
DDX41-212ENST00000511040 C11orf1Q9H5F2 150 aa10.33□□□□□ -0.76
DDX41-212ENST00000511040 DOK5Q9P104 306 aa10.33□□□□□ -0.76
DDX41-212ENST00000511040 MGAT4CQ9UBM8 478 aa10.33□□□□□ -0.76
DDX41-212ENST00000511040 CST7O76096 145 aa10.32□□□□□ -0.76
DDX41-212ENST00000511040 ORM2P19652 201 aa10.32□□□□□ -0.76
DDX41-212ENST00000511040 APOC4P55056 127 aa10.32□□□□□ -0.76
DDX41-212ENST00000511040 IL15RAQ13261 267 aa10.32□□□□□ -0.76
DDX41-212ENST00000511040 BPIFCQ8NFQ6 507 aa10.32□□□□□ -0.76
DDX41-212ENST00000511040 OR1B1Q8NGR6 318 aa10.32□□□□□ -0.76
DDX41-212ENST00000511040 KNCNA6PVL3 124 aa10.31□□□□□ -0.76
DDX41-212ENST00000511040 PVALBP20472 110 aaPredicted RBP10.31□□□□□ -0.76
DDX41-212ENST00000511040 NUP62P37198 522 aaPredicted RBP10.31□□□□□ -0.76
DDX41-212ENST00000511040 AP2S1P53680 142 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms