RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 LHFPL1Q86WI0 220 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 IGFBP2P18065 325 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 SPINT1O43278 529 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 KIR3DS1Q14943 382 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 FOXI3A8MTJ6 420 aaPredicted RBP7.01□□□□□ -1.29
HTT-208ENST00000510626 ZNF664Q8N3J9 261 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 CYTL1Q9NRR1 136 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 SHISA3A0PJX4 238 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 K7EP34 96 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 GLRXP35754 106 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 TEX43Q6ZNM6 134 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 FAM231DQ6ZW35 169 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 AMELYQ99218 206 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 C12orf77C9JDV5 145 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 CRPP02741 224 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 APOBEC3AP31941 199 aaPredicted RBP7.01□□□□□ -1.29
HTT-208ENST00000510626 OCC1Q8TAD7 63 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 VKORC1Q9BQB6 163 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 IGHV2-70DA0A0C4DH43 119 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 DPM3Q9P2X0 92 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 EGR4Q05215 589 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 C1orf210Q8IVY1 113 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 SEPSECSQ9HD40 501 aaKnown RBP7.01□□□□□ -1.29
HTT-208ENST00000510626 GAGE12JA6NER3 117 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 GAGE7O76087 117 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 GAGE12FP0CL80 117 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 GAGE12GP0CL81 117 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 GAGE12IP0CL82 117 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 GAGE4Q13068 117 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 TRIP6Q15654 476 aaKnown RBP7.01□□□□□ -1.29
HTT-208ENST00000510626 GAGE5Q13069 117 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 GAGE6Q13070 117 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 IGHV2-26A0A0B4J1V2 119 aa7□□□□□ -1.29
HTT-208ENST00000510626 PSG3Q16557 428 aa7□□□□□ -1.29
HTT-208ENST00000510626 H0YIZ8 118 aa7□□□□□ -1.29
HTT-208ENST00000510626 PGPEP1Q9NXJ5 209 aa7□□□□□ -1.29
HTT-208ENST00000510626 TRAV24A0A0B4J272 114 aa7□□□□□ -1.29
HTT-208ENST00000510626 PRCDQ00LT1 54 aa7□□□□□ -1.29
HTT-208ENST00000510626 IGKV3D-11A0A0A0MRZ8 115 aa7□□□□□ -1.29
HTT-208ENST00000510626 TRAV21A0A0B4J279 112 aa7□□□□□ -1.29
HTT-208ENST00000510626 GAGE12HA6NDE8 117 aa7□□□□□ -1.29
HTT-208ENST00000510626 MNX1P50219 401 aaPredicted RBP7□□□□□ -1.29
HTT-208ENST00000510626 CFAP161Q6P656 301 aa7□□□□□ -1.29
HTT-208ENST00000510626 SPSB3Q6PJ21 355 aa7□□□□□ -1.29
HTT-208ENST00000510626 DENND4CQ5VZ89 1909 aa7□□□□□ -1.29
HTT-208ENST00000510626 RNASE1P07998 156 aaKnown RBP7□□□□□ -1.29
HTT-208ENST00000510626 TMEM14EPQ6UXP3 125 aa7□□□□□ -1.29
HTT-208ENST00000510626 TMEM258P61165 79 aa7□□□□□ -1.29
HTT-208ENST00000510626 NEUROG3Q9Y4Z2 214 aa7□□□□□ -1.29
HTT-208ENST00000510626 FOXH1O75593 365 aa7□□□□□ -1.29
HTT-208ENST00000510626 IGFBP6P24592 240 aaPredicted RBP7□□□□□ -1.29
HTT-208ENST00000510626 TCTEX1D4Q5JR98 221 aa7□□□□□ -1.29
HTT-208ENST00000510626 C16orf47Q6ZP98 133 aaPredicted RBP7□□□□□ -1.29
HTT-208ENST00000510626 SRSF3P84103 164 aaKnown RBP7□□□□□ -1.29
HTT-208ENST00000510626 MIR17HGQ75NE6 70 aa7□□□□□ -1.29
HTT-208ENST00000510626 PPIAL4CA0A0B4J2A2 164 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 SNRPCP09234 159 aaKnown RBP6.99□□□□□ -1.29
HTT-208ENST00000510626 PPIAL4GP0DN37 164 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 ITLN1Q8WWA0 313 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 J3KT08 172 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 CD69Q07108 199 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 KLK15Q9H2R5 256 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 GFRA1P56159 465 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 TRAV8-1A0A0A6YYK1 113 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 C22orf46C9J442 243 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 TBX6O95947 436 aaPredicted RBP6.99□□□□□ -1.29
HTT-208ENST00000510626 EFEMP2O95967 443 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 SLC25A16P16260 332 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 C2orf82Q6UX34 121 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 TMEM92Q6UXU6 159 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 IL17RELQ6ZVW7 336 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 DUSP14O95147 198 aaKnown RBP6.99□□□□□ -1.29
HTT-208ENST00000510626 ABHD17AQ96GS6 310 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 PPP1R27Q86WC6 154 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 TPRX1Q8N7U7 411 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 TNFRSF6BO95407 300 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 GTSF1LQ9H1H1 148 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 MYF5P13349 255 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 TMEM141Q96I45 108 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 HILPDAQ9Y5L2 63 aa6.99□□□□□ -1.29
HTT-208ENST00000510626 OVOL1O14753 267 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 IGHV4-39P01824 125 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 WNT2P09544 360 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 GFI1BQ5VTD9 330 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 DTX2Q86UW9 622 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 CXCL1P09341 107 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 DSCAML1Q8TD84 2053 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 VCYO14598 125 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 CLEC2AQ6UVW9 174 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 ZNF501Q96CX3 271 aaPredicted RBP6.98□□□□□ -1.29
HTT-208ENST00000510626 THSD7AQ9UPZ6 1657 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 PRRC2AP48634 2157 aaKnown RBP6.98□□□□□ -1.29
HTT-208ENST00000510626 PRR7Q8TB68 274 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 SRXN1Q9BYN0 137 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 NLRC5Q86WI3 1866 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 TANC1Q9C0D5 1861 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 ZIC4Q8N9L1 334 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 J3KRW8 73 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 LEPROTO15243 131 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 ZNF415Q09FC8 603 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms