RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 RBPMSQ93062 196 aaKnown RBP11.29□□□□□ -0.6
RAB40C-202ENST00000509637 ACY3Q96HD9 319 aa11.29□□□□□ -0.6
RAB40C-202ENST00000509637 SLC35B3Q9H1N7 401 aa11.29□□□□□ -0.6
RAB40C-202ENST00000509637 NAA60Q9H7X0 242 aa11.29□□□□□ -0.6
RAB40C-202ENST00000509637 SEPSECSQ9HD40 501 aaKnown RBP11.29□□□□□ -0.6
RAB40C-202ENST00000509637 DKK2Q9UBU2 259 aa11.29□□□□□ -0.6
RAB40C-202ENST00000509637 IGHV3OR16-12A0A075B7B8 117 aa11.28□□□□□ -0.6
RAB40C-202ENST00000509637 RPS10-NUDT3A0A1W2PQS6 291 aa11.28□□□□□ -0.6
RAB40C-202ENST00000509637 ATG12O94817 140 aa11.28□□□□□ -0.6
RAB40C-202ENST00000509637 RD3LP0DJH9 198 aa11.28□□□□□ -0.6
RAB40C-202ENST00000509637 NKX2-1P43699 371 aaPredicted RBP11.28□□□□□ -0.6
RAB40C-202ENST00000509637 AP2S1P53680 142 aaPredicted RBP11.28□□□□□ -0.6
RAB40C-202ENST00000509637 ZNF90Q03938 601 aa11.28□□□□□ -0.6
RAB40C-202ENST00000509637 CCDC71LQ8N9Z2 235 aa11.28□□□□□ -0.6
RAB40C-202ENST00000509637 NARS2Q96I59 477 aaKnown RBP11.28□□□□□ -0.6
RAB40C-202ENST00000509637 C20orf173Q96LM9 149 aa11.28□□□□□ -0.6
RAB40C-202ENST00000509637 CRYM-AS1A6NIL9 109 aa11.27□□□□□ -0.61
RAB40C-202ENST00000509637 CEBPZOSA8MTT3 80 aa11.27□□□□□ -0.61
RAB40C-202ENST00000509637 CTDSP2O14595 271 aa11.27□□□□□ -0.61
RAB40C-202ENST00000509637 TNFAIP8O95379 198 aa11.27□□□□□ -0.61
RAB40C-202ENST00000509637 TBPP20226 339 aa11.27□□□□□ -0.61
RAB40C-202ENST00000509637 NPY1RP25929 384 aa11.27□□□□□ -0.61
RAB40C-202ENST00000509637 FAM222AQ5U5X8 452 aa11.27□□□□□ -0.61
RAB40C-202ENST00000509637 TMEM268Q5VZI3 342 aa11.27□□□□□ -0.61
RAB40C-202ENST00000509637 FAM219AQ8IW50 185 aa11.27□□□□□ -0.61
RAB40C-202ENST00000509637 RNASE11Q8TAA1 199 aaKnown RBP11.27□□□□□ -0.61
RAB40C-202ENST00000509637 SAV1Q9H4B6 383 aaPredicted RBP11.27□□□□□ -0.61
RAB40C-202ENST00000509637 TMEM56-RWDD3S4R434 201 aa11.27□□□□□ -0.61
RAB40C-202ENST00000509637 SPART-AS1P0CW21 52 aa11.26□□□□□ -0.61
RAB40C-202ENST00000509637 SMIM18P0DKX4 95 aa11.26□□□□□ -0.61
RAB40C-202ENST00000509637 ZNF182P17025 639 aaPredicted RBP11.26□□□□□ -0.61
RAB40C-202ENST00000509637 TAS2R19P59542 299 aa11.26□□□□□ -0.61
RAB40C-202ENST00000509637 SNRPD3P62318 126 aaKnown RBP11.26□□□□□ -0.61
RAB40C-202ENST00000509637 ZNF79Q15937 498 aa11.26□□□□□ -0.61
RAB40C-202ENST00000509637 RNF125Q96EQ8 232 aa11.26□□□□□ -0.61
RAB40C-202ENST00000509637 C1QTNF4Q9BXJ3 329 aa11.26□□□□□ -0.61
RAB40C-202ENST00000509637 IGKV1OR2-108A0A075B7D4 117 aa11.25□□□□□ -0.61
RAB40C-202ENST00000509637 GABARAPO95166 117 aa11.25□□□□□ -0.61
RAB40C-202ENST00000509637 EIF2B2P49770 351 aaKnown RBP11.25□□□□□ -0.61
RAB40C-202ENST00000509637 SUPT4H1P63272 117 aaKnown RBP11.25□□□□□ -0.61
RAB40C-202ENST00000509637 GAMTQ14353 236 aa11.25□□□□□ -0.61
RAB40C-202ENST00000509637 GPR107Q5VW38 600 aa11.25□□□□□ -0.61
RAB40C-202ENST00000509637 OR4C16Q8NGL9 310 aa11.25□□□□□ -0.61
RAB40C-202ENST00000509637 LINC00052Q96N35 136 aa11.25□□□□□ -0.61
RAB40C-202ENST00000509637 RBKSQ9H477 322 aa11.25□□□□□ -0.61
RAB40C-202ENST00000509637 GABARAPH6UMI1 98 aa11.24□□□□□ -0.61
RAB40C-202ENST00000509637 B3GALNT1O75752 331 aa11.24□□□□□ -0.61
RAB40C-202ENST00000509637 NUTF2P61970 127 aaKnown RBP11.24□□□□□ -0.61
RAB40C-202ENST00000509637 MZT2AQ6P582 158 aa11.24□□□□□ -0.61
RAB40C-202ENST00000509637 AMTNQ6UX39 209 aa11.24□□□□□ -0.61
RAB40C-202ENST00000509637 LYZL2Q7Z4W2 148 aa11.24□□□□□ -0.61
RAB40C-202ENST00000509637 CLUHP3Q96NS8 147 aa11.24□□□□□ -0.61
RAB40C-202ENST00000509637 NIPSNAP3BQ9BS92 247 aa11.24□□□□□ -0.61
RAB40C-202ENST00000509637 PBDC1Q9BVG4 233 aa11.24□□□□□ -0.61
RAB40C-202ENST00000509637 VCX3AQ9NNX9 186 aa11.24□□□□□ -0.61
RAB40C-202ENST00000509637 LRP1BQ9NZR2 4599 aa11.23□□□□□ -0.61
RAB40C-202ENST00000509637 SMIM9A6NGZ8 99 aa11.23□□□□□ -0.61
RAB40C-202ENST00000509637 A8MTW9 85 aa11.23□□□□□ -0.61
RAB40C-202ENST00000509637 IFNA10P01566 189 aa11.23□□□□□ -0.61
RAB40C-202ENST00000509637 HTN3P15516 51 aa11.23□□□□□ -0.61
RAB40C-202ENST00000509637 KLF9Q13886 244 aaPredicted RBP11.23□□□□□ -0.61
RAB40C-202ENST00000509637 FAM78BQ5VT40 261 aa11.23□□□□□ -0.61
RAB40C-202ENST00000509637 TMEM88Q6PEY1 159 aa11.23□□□□□ -0.61
RAB40C-202ENST00000509637 TMEM182Q6ZP80 229 aaPredicted RBP11.23□□□□□ -0.61
RAB40C-202ENST00000509637 FOXI2Q6ZQN5 318 aa11.23□□□□□ -0.61
RAB40C-202ENST00000509637 OR4B1Q8NGF8 309 aa11.23□□□□□ -0.61
RAB40C-202ENST00000509637 HSPB7Q9UBY9 170 aa11.23□□□□□ -0.61
RAB40C-202ENST00000509637 YTHDF2Q9Y5A9 579 aaKnown RBP11.23□□□□□ -0.61
RAB40C-202ENST00000509637 RFNGQ9Y644 331 aa11.23□□□□□ -0.61
RAB40C-202ENST00000509637 A0A0J9YX75 114 aa11.22□□□□□ -0.61
RAB40C-202ENST00000509637 SULT1A3P0DMM9 295 aa11.22□□□□□ -0.61
RAB40C-202ENST00000509637 SULT1A4P0DMN0 295 aa11.22□□□□□ -0.61
RAB40C-202ENST00000509637 PAX9P55771 341 aa11.22□□□□□ -0.61
RAB40C-202ENST00000509637 TNP2Q05952 138 aa11.22□□□□□ -0.61
RAB40C-202ENST00000509637 OR2F1Q13607 317 aa11.22□□□□□ -0.61
RAB40C-202ENST00000509637 ETFRF1Q6IPR1 90 aa11.22□□□□□ -0.61
RAB40C-202ENST00000509637 CENPSQ8N2Z9 138 aa11.22□□□□□ -0.61
RAB40C-202ENST00000509637 OR51S1Q8NGJ8 323 aa11.22□□□□□ -0.61
RAB40C-202ENST00000509637 C14orf166Q9Y224 244 aaKnown RBP11.22□□□□□ -0.61
RAB40C-202ENST00000509637 CRXO43186 299 aaPredicted RBP11.21□□□□□ -0.61
RAB40C-202ENST00000509637 SCGB2A1O75556 95 aa11.21□□□□□ -0.61
RAB40C-202ENST00000509637 SPCS2Q15005 226 aa11.21□□□□□ -0.61
RAB40C-202ENST00000509637 SURF2Q15527 256 aaPredicted RBP11.21□□□□□ -0.61
RAB40C-202ENST00000509637 IGFL4Q6B9Z1 124 aa11.21□□□□□ -0.61
RAB40C-202ENST00000509637 SMIM4Q8WVI0 70 aa11.21□□□□□ -0.61
RAB40C-202ENST00000509637 LOC102723971A0A1B0GUV8 181 aa11.2□□□□□ -0.62
RAB40C-202ENST00000509637 TMEM189A5PLL7 270 aa11.2□□□□□ -0.62
RAB40C-202ENST00000509637 GSTZ1O43708 216 aaPredicted RBP11.2□□□□□ -0.62
RAB40C-202ENST00000509637 IFNA21P01568 189 aa11.2□□□□□ -0.62
RAB40C-202ENST00000509637 PRB4P10163 310 aaPredicted RBP11.2□□□□□ -0.62
RAB40C-202ENST00000509637 PSMB3P49720 205 aa11.2□□□□□ -0.62
RAB40C-202ENST00000509637 LYZP61626 148 aa11.2□□□□□ -0.62
RAB40C-202ENST00000509637 PSG9Q00887 426 aa11.2□□□□□ -0.62
RAB40C-202ENST00000509637 OXA1LQ15070 435 aa11.2□□□□□ -0.62
RAB40C-202ENST00000509637 RNF212Q495C1 297 aa11.2□□□□□ -0.62
RAB40C-202ENST00000509637 OR8G2PQ6IF36 304 aa11.2□□□□□ -0.62
RAB40C-202ENST00000509637 UBE2DNLQ8IWF7 75 aa11.2□□□□□ -0.62
RAB40C-202ENST00000509637 LGI3Q8N145 548 aa11.2□□□□□ -0.62
RAB40C-202ENST00000509637 DTD1Q8TEA8 209 aa11.2□□□□□ -0.62
RAB40C-202ENST00000509637 FAM210BQ96KR6 192 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms