RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 SCGB1C1Q8TD33 95 aa11.32□□□□□ -0.6
RNF4-213ENST00000509388 MARC2Q969Z3 335 aa11.32□□□□□ -0.6
RNF4-213ENST00000509388 NARS2Q96I59 477 aaKnown RBP11.32□□□□□ -0.6
RNF4-213ENST00000509388 METTL26Q96S19 204 aa11.32□□□□□ -0.6
RNF4-213ENST00000509388 PBDC1Q9BVG4 233 aa11.32□□□□□ -0.6
RNF4-213ENST00000509388 MFFQ9GZY8 342 aa11.32□□□□□ -0.6
RNF4-213ENST00000509388 WDR83OSQ9Y284 106 aa11.32□□□□□ -0.6
RNF4-213ENST00000509388 C2orf70A6NJV1 201 aa11.31□□□□□ -0.6
RNF4-213ENST00000509388 A8MWP6 167 aa11.31□□□□□ -0.6
RNF4-213ENST00000509388 G3V3Q6 166 aa11.31□□□□□ -0.6
RNF4-213ENST00000509388 AGPAT2O15120 278 aa11.31□□□□□ -0.6
RNF4-213ENST00000509388 MPDU1O75352 247 aa11.31□□□□□ -0.6
RNF4-213ENST00000509388 NPPCP23582 126 aa11.31□□□□□ -0.6
RNF4-213ENST00000509388 BMI1P35226 326 aa11.31□□□□□ -0.6
RNF4-213ENST00000509388 INSL3P51460 131 aa11.31□□□□□ -0.6
RNF4-213ENST00000509388 LYZP61626 148 aa11.31□□□□□ -0.6
RNF4-213ENST00000509388 ZNF709Q8N972 641 aa11.31□□□□□ -0.6
RNF4-213ENST00000509388 DYNLRB2Q8TF09 96 aa11.31□□□□□ -0.6
RNF4-213ENST00000509388 RNF125Q96EQ8 232 aa11.31□□□□□ -0.6
RNF4-213ENST00000509388 MRPL27Q9P0M9 148 aaKnown RBP11.31□□□□□ -0.6
RNF4-213ENST00000509388 PFDN2Q9UHV9 154 aa11.31□□□□□ -0.6
RNF4-213ENST00000509388 ANK2Q01484 3957 aa11.31□□□□□ -0.6
RNF4-213ENST00000509388 WNK1Q9H4A3 2382 aa11.3□□□□□ -0.6
RNF4-213ENST00000509388 TMEM213A2RRL7 107 aa11.3□□□□□ -0.6
RNF4-213ENST00000509388 HMSDA8MTL9 139 aa11.3□□□□□ -0.6
RNF4-213ENST00000509388 CSN3P07498 182 aa11.3□□□□□ -0.6
RNF4-213ENST00000509388 FOLR2P14207 255 aa11.3□□□□□ -0.6
RNF4-213ENST00000509388 CBLN1P23435 193 aa11.3□□□□□ -0.6
RNF4-213ENST00000509388 GATA2P23769 480 aaPredicted RBP11.3□□□□□ -0.6
RNF4-213ENST00000509388 S100A7P31151 101 aa11.3□□□□□ -0.6
RNF4-213ENST00000509388 ZNF266Q14584 549 aa11.3□□□□□ -0.6
RNF4-213ENST00000509388 ZFAND3Q9H8U3 227 aa11.3□□□□□ -0.6
RNF4-213ENST00000509388 FBXL17Q9UF56 701 aa11.3□□□□□ -0.6
RNF4-213ENST00000509388 RABAC1Q9UI14 185 aa11.3□□□□□ -0.6
RNF4-213ENST00000509388 LSM4Q9Y4Z0 139 aaKnown RBP11.3□□□□□ -0.6
RNF4-213ENST00000509388 A0A1W2PS18 150 aa11.29□□□□□ -0.6
RNF4-213ENST00000509388 RNF222A6NCQ9 220 aa11.29□□□□□ -0.6
RNF4-213ENST00000509388 C17orf112F2Z3M2 114 aa11.29□□□□□ -0.6
RNF4-213ENST00000509388 ORM2P19652 201 aa11.29□□□□□ -0.6
RNF4-213ENST00000509388 Q6ZRG5 221 aa11.29□□□□□ -0.6
RNF4-213ENST00000509388 PPP1R14BQ96C90 147 aa11.29□□□□□ -0.6
RNF4-213ENST00000509388 MGST2Q99735 147 aa11.29□□□□□ -0.6
RNF4-213ENST00000509388 WDR61Q9GZS3 305 aaKnown RBP11.29□□□□□ -0.6
RNF4-213ENST00000509388 IGHV3-49A0A0A0MS15 119 aa11.28□□□□□ -0.6
RNF4-213ENST00000509388 BORCS7-ASMTA0A0B4J1R7 106 aa11.28□□□□□ -0.6
RNF4-213ENST00000509388 IGHV7-4-1A0A0J9YVY3 117 aa11.28□□□□□ -0.6
RNF4-213ENST00000509388 WI2-2373I1.2A0A1W2PRP0 233 aa11.28□□□□□ -0.6
RNF4-213ENST00000509388 TAAR5O14804 337 aa11.28□□□□□ -0.6
RNF4-213ENST00000509388 C1QBP02746 253 aa11.28□□□□□ -0.6
RNF4-213ENST00000509388 HNRNPCP07910 306 aaKnown RBP eCLIP11.28□□□□□ -0.64e-7■□□□□ 10.8
RNF4-213ENST00000509388 LINC00869P0C866 280 aa11.28□□□□□ -0.6
RNF4-213ENST00000509388 OXLD1Q5BKU9 147 aa11.28□□□□□ -0.6
RNF4-213ENST00000509388 IL34Q6ZMJ4 242 aa11.28□□□□□ -0.6
RNF4-213ENST00000509388 TMEM182Q6ZP80 229 aaPredicted RBP11.28□□□□□ -0.6
RNF4-213ENST00000509388 S100A7AQ86SG5 101 aa11.28□□□□□ -0.6
RNF4-213ENST00000509388 OR11H4Q8NGC9 324 aa11.28□□□□□ -0.6
RNF4-213ENST00000509388 OR1B1Q8NGR6 318 aa11.28□□□□□ -0.6
RNF4-213ENST00000509388 GRAMD2BQ96HH9 432 aa11.28□□□□□ -0.6
RNF4-213ENST00000509388 HYLS1Q96M11 299 aa11.28□□□□□ -0.6
RNF4-213ENST00000509388 NPCDR1Q9BY65 106 aa11.28□□□□□ -0.6
RNF4-213ENST00000509388 TMEM231Q9H6L2 316 aa11.28□□□□□ -0.6
RNF4-213ENST00000509388 KCNIP2Q9NS61 270 aa11.28□□□□□ -0.6
RNF4-213ENST00000509388 SIGLEC8Q9NYZ4 499 aa11.28□□□□□ -0.6
RNF4-213ENST00000509388 SMPXQ9UHP9 88 aa11.28□□□□□ -0.6
RNF4-213ENST00000509388 SLC45A2Q9UMX9 530 aa11.28□□□□□ -0.6
RNF4-213ENST00000509388 A0A0D9SG52 128 aa11.27□□□□□ -0.61
RNF4-213ENST00000509388 PFDN1O60925 122 aa11.27□□□□□ -0.61
RNF4-213ENST00000509388 HYPMO75409 117 aa11.27□□□□□ -0.61
RNF4-213ENST00000509388 OR5G3P0C626 314 aa11.27□□□□□ -0.61
RNF4-213ENST00000509388 USF2Q15853 346 aaPredicted RBP11.27□□□□□ -0.61
RNF4-213ENST00000509388 ZFP69Q49AA0 526 aa11.27□□□□□ -0.61
RNF4-213ENST00000509388 MIC13Q5XKP0 118 aa11.27□□□□□ -0.61
RNF4-213ENST00000509388 ZNF414Q96IQ9 312 aa11.27□□□□□ -0.61
RNF4-213ENST00000509388 RHPN1-AS1Q9BWJ2 59 aa11.27□□□□□ -0.61
RNF4-213ENST00000509388 GGTLC1Q9BX51 225 aa11.27□□□□□ -0.61
RNF4-213ENST00000509388 ARL6Q9H0F7 186 aa11.27□□□□□ -0.61
RNF4-213ENST00000509388 WFDC1Q9HC57 220 aa11.27□□□□□ -0.61
RNF4-213ENST00000509388 TECRQ9NZ01 308 aaKnown RBP11.27□□□□□ -0.61
RNF4-213ENST00000509388 DOK5Q9P104 306 aa11.27□□□□□ -0.61
RNF4-213ENST00000509388 ZMAT5Q9UDW3 170 aaKnown RBP11.27□□□□□ -0.61
RNF4-213ENST00000509388 IGHV3OR16-13A0A075B7E8 117 aa11.26□□□□□ -0.61
RNF4-213ENST00000509388 IGHV3-74A0A0B4J1X5 117 aa11.26□□□□□ -0.61
RNF4-213ENST00000509388 IGHV3-66A0A0C4DH42 116 aa11.26□□□□□ -0.61
RNF4-213ENST00000509388 KANTRA0A1W2PQU2 76 aa11.26□□□□□ -0.61
RNF4-213ENST00000509388 C8orf88P0DMB2 117 aa11.26□□□□□ -0.61
RNF4-213ENST00000509388 EDN2P20800 178 aa11.26□□□□□ -0.61
RNF4-213ENST00000509388 CRYBB3P26998 211 aa11.26□□□□□ -0.61
RNF4-213ENST00000509388 RPL29P47914 159 aaKnown RBP11.26□□□□□ -0.61
RNF4-213ENST00000509388 EIF2B2P49770 351 aaKnown RBP11.26□□□□□ -0.61
RNF4-213ENST00000509388 B2MP61769 119 aa11.26□□□□□ -0.61
RNF4-213ENST00000509388 ZNF345Q14585 488 aa11.26□□□□□ -0.61
RNF4-213ENST00000509388 OPCMLQ14982 345 aa11.26□□□□□ -0.61
RNF4-213ENST00000509388 PXDC1Q5TGL8 231 aa11.26□□□□□ -0.61
RNF4-213ENST00000509388 LAMTOR1Q6IAA8 161 aa11.26□□□□□ -0.61
RNF4-213ENST00000509388 RBPMS2Q6ZRY4 209 aaKnown RBP11.26□□□□□ -0.61
RNF4-213ENST00000509388 STPG3Q8N7X2 389 aa11.26□□□□□ -0.61
RNF4-213ENST00000509388 PXMP4Q9Y6I8 212 aa11.26□□□□□ -0.61
RNF4-213ENST00000509388 CHEK1O14757 476 aa11.25□□□□□ -0.61
RNF4-213ENST00000509388 COX7A2P2O60397 106 aa11.25□□□□□ -0.61
RNF4-213ENST00000509388 DEFB114Q30KQ6 69 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms