RNA–Protein interactions for RNA: ENST00000509014.2

CALCOCO2-212, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-212ENST00000509014 FGF20Q9NP95 211 aaPredicted RBP3.47□□□□□ -1.85
CALCOCO2-212ENST00000509014 C12orf4Q9NQ89 552 aa3.47□□□□□ -1.85
CALCOCO2-212ENST00000509014 TMEM14BQ9NUH8 114 aa3.47□□□□□ -1.85
CALCOCO2-212ENST00000509014 BABAM2Q9NXR7 383 aa3.47□□□□□ -1.85
CALCOCO2-212ENST00000509014 SMPD3Q9NY59 655 aaPredicted RBP3.47□□□□□ -1.85
CALCOCO2-212ENST00000509014 POMPQ9Y244 141 aa3.47□□□□□ -1.85
CALCOCO2-212ENST00000509014 IGHV3-21A0A0B4J1V1 117 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 TRAV3A0A0B4J244 114 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 C5orf51A6NDU8 294 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 SNTNA6NMZ2 147 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 KNCNA6PVL3 124 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 PHOX2AO14813 284 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 BET1O15155 118 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 NUPL2O15504 423 aaKnown RBP3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 SMR3BP02814 79 aaPredicted RBP3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 CTSGP08311 255 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 SPART-AS1P0CW21 52 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 CD37P11049 281 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 HLA-GP17693 338 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 CALB2P22676 271 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 FUSP35637 526 aaKnown RBP eCLIP3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 RPL8P62917 257 aaKnown RBP3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 EIF4EBP1Q13541 118 aaPredicted RBP3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 HSP90B2PQ58FF3 399 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 Q6ZRG5 221 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 H1FOOQ8IZA3 346 aaPredicted RBP3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 SAMD12Q8N8I0 201 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 OR10W1Q8NGF6 305 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 OR10J5Q8NHC4 309 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 RHOXF1Q8NHV9 184 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 APH1BQ8WW43 257 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 DGCR14Q96DF8 476 aaKnown RBP3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 ARHGAP5-AS1Q96IT6 56 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 ATP6V0BQ99437 205 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 CMSS1Q9BQ75 279 aaKnown RBP3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 PECRQ9BY49 303 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 VSIRQ9H7M9 311 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 CLEC2DQ9UHP7 191 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 TP53TG3Q9ULZ0 132 aa3.46□□□□□ -1.86
CALCOCO2-212ENST00000509014 TRAV14DV4A0A0A6YYC5 116 aa3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 TRAV2A0A0B4J234 112 aa3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 K7EIM0 57 aa3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 DIRAS3O95661 229 aa3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 FCGR3AP08637 254 aa3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 CRHBPP24387 322 aa3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 PAFAH1B2P68402 229 aa3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 WT1-ASQ06250 92 aa3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 INSL4Q14641 139 aa3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 P2RY14Q15391 338 aa3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 UBE2UQ5VVX9 321 aa3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 SLC25A24Q6NUK1 477 aa3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 TMPRSS11AQ6ZMR5 421 aa3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 VSTM2AQ8TAG5 236 aa3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 MAFIPQ8WZ33 124 aa3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 MRPL53Q96EL3 112 aaKnown RBP3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 NIPSNAP3BQ9BS92 247 aa3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 BET1LQ9NYM9 111 aa3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 C21orf62Q9NYP8 219 aa3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 DHRS4-AS1Q9P1J3 65 aa3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 RBMX2Q9Y388 322 aaKnown RBP3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 RBM7Q9Y580 266 aaKnown RBP3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 LRP1Q07954 4544 aaKnown RBP3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
CALCOCO2-212ENST00000509014 IGKV1D-8A0A087WSZ0 117 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 IGKV1D-13A0A0B4J2D9 117 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 IGHV3-66A0A0C4DH42 116 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 PNMA8CA0A1B0GUJ8 204 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 ZNF705FA8MVS1 300 aaPredicted RBP3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 J3QRK9 145 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 DNASE2O00115 360 aaPredicted RBP3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 ZNF253O75346 499 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 WBP4O75554 376 aaKnown RBP3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 CDK1P06493 297 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 SERPINE2P07093 398 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 ZNF705DP0CH99 300 aaPredicted RBP3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 ZNF705BP0CI00 300 aaPredicted RBP3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 IGKV1-13P0DP09 117 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 HTN3P15516 51 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 EMP1P54849 157 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 TAS2R43P59537 309 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 KRTAP10-1P60331 282 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 OXA1LQ15070 435 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 TIMM50Q3ZCQ8 353 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 Q56UQ5 140 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 ACTL10Q5JWF8 245 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 FAM222AQ5U5X8 452 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 ZNF705AQ6ZN79 300 aaPredicted RBP3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 GDPD1Q8N9F7 314 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 UBAC2Q8NBM4 344 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 DUSP18Q8NEJ0 188 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 OR4S2Q8NH73 311 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 Q96MT0 163 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 GINS4Q9BRT9 223 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 XCL2Q9UBD3 114 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 MRPS7Q9Y2R9 242 aaKnown RBP3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 PRELID3BQ9Y3B1 194 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 LINC00588Q9Y4M8 146 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 AP4S1Q9Y587 144 aa3.44□□□□□ -1.86
CALCOCO2-212ENST00000509014 DNAH8Q96JB1 4490 aa3.43□□□□□ -1.86
CALCOCO2-212ENST00000509014 TEX50A0A1B0GTY4 177 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms