RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 OR51G1Q8NGK1 321 aa9.06□□□□□ -0.96
PDPN-208ENST00000509009 MCFD2Q8NI22 146 aa9.06□□□□□ -0.96
PDPN-208ENST00000509009 DTD1Q8TEA8 209 aa9.06□□□□□ -0.96
PDPN-208ENST00000509009 C2CD4CQ8TF44 421 aa9.06□□□□□ -0.96
PDPN-208ENST00000509009 HRH4Q9H3N8 390 aa9.06□□□□□ -0.96
PDPN-208ENST00000509009 SEPSECSQ9HD40 501 aaKnown RBP9.06□□□□□ -0.96
PDPN-208ENST00000509009 CLEC5AQ9NY25 188 aa9.06□□□□□ -0.96
PDPN-208ENST00000509009 X6R8D5 127 aa9.06□□□□□ -0.96
PDPN-208ENST00000509009 FRAS1Q86XX4 4008 aa9.06□□□□□ -0.96
PDPN-208ENST00000509009 ELOA3CA0A087WX78 387 aaPredicted RBP9.05□□□□□ -0.96
PDPN-208ENST00000509009 FAM90A26D6RGX4 464 aa9.05□□□□□ -0.96
PDPN-208ENST00000509009 PITX3O75364 302 aa9.05□□□□□ -0.96
PDPN-208ENST00000509009 SIGLEC15Q6ZMC9 328 aa9.05□□□□□ -0.96
PDPN-208ENST00000509009 NRN1Q9NPD7 142 aa9.05□□□□□ -0.96
PDPN-208ENST00000509009 APLNQ9ULZ1 77 aa9.05□□□□□ -0.96
PDPN-208ENST00000509009 VPS13DQ5THJ4 4388 aa9.05□□□□□ -0.96
PDPN-208ENST00000509009 IGKV1D-37A0A075B6S9 117 aa9.04□□□□□ -0.96
PDPN-208ENST00000509009 H3BMM0 161 aa9.04□□□□□ -0.96
PDPN-208ENST00000509009 ANXA3P12429 323 aa9.04□□□□□ -0.96
PDPN-208ENST00000509009 HLA-DMBP28068 263 aa9.04□□□□□ -0.96
PDPN-208ENST00000509009 TCTAP57738 103 aa9.04□□□□□ -0.96
PDPN-208ENST00000509009 SNRPD3P62318 126 aaKnown RBP9.04□□□□□ -0.96
PDPN-208ENST00000509009 SRPXP78539 464 aa9.04□□□□□ -0.96
PDPN-208ENST00000509009 ZNF90Q03938 601 aa9.04□□□□□ -0.96
PDPN-208ENST00000509009 OR1S1Q8NH92 325 aa9.04□□□□□ -0.96
PDPN-208ENST00000509009 RNF125Q96EQ8 232 aa9.04□□□□□ -0.96
PDPN-208ENST00000509009 TBC1D24Q9ULP9 559 aa9.04□□□□□ -0.96
PDPN-208ENST00000509009 DNAH10Q8IVF4 4471 aa9.04□□□□□ -0.96
PDPN-208ENST00000509009 IGLL5B9A064 214 aa9.03□□□□□ -0.96
PDPN-208ENST00000509009 C11orf94C9JXX5 98 aa9.03□□□□□ -0.96
PDPN-208ENST00000509009 PRR20EP86478 221 aa9.03□□□□□ -0.96
PDPN-208ENST00000509009 PRR20CP86479 221 aa9.03□□□□□ -0.96
PDPN-208ENST00000509009 PRR20DP86480 221 aa9.03□□□□□ -0.96
PDPN-208ENST00000509009 PRR20BP86481 221 aa9.03□□□□□ -0.96
PDPN-208ENST00000509009 PRR20AP86496 221 aa9.03□□□□□ -0.96
PDPN-208ENST00000509009 PYDC2Q56P42 97 aa9.03□□□□□ -0.96
PDPN-208ENST00000509009 TMEM128Q5BJH2 165 aa9.03□□□□□ -0.96
PDPN-208ENST00000509009 TMED4Q7Z7H5 227 aa9.03□□□□□ -0.96
PDPN-208ENST00000509009 TRIM63Q969Q1 353 aa9.03□□□□□ -0.96
PDPN-208ENST00000509009 PBDC1Q9BVG4 233 aa9.03□□□□□ -0.96
PDPN-208ENST00000509009 PIGBOS1A0A0B4J2F0 54 aa9.02□□□□□ -0.97
PDPN-208ENST00000509009 DUXBA0A1W2PPF3 345 aa9.02□□□□□ -0.97
PDPN-208ENST00000509009 ZFP92A6NM28 416 aa9.02□□□□□ -0.97
PDPN-208ENST00000509009 SNRPGP15A8MWD9 76 aa9.02□□□□□ -0.97
PDPN-208ENST00000509009 NOL3O60936 208 aaKnown RBP9.02□□□□□ -0.97
PDPN-208ENST00000509009 SLC25A6P12236 298 aa9.02□□□□□ -0.97
PDPN-208ENST00000509009 FAUP35544 74 aaKnown RBP9.02□□□□□ -0.97
PDPN-208ENST00000509009 OR8G2PQ6IF36 304 aa9.02□□□□□ -0.97
PDPN-208ENST00000509009 TOMM5Q8N4H5 51 aa9.02□□□□□ -0.97
PDPN-208ENST00000509009 LRTM2Q8N967 370 aa9.02□□□□□ -0.97
PDPN-208ENST00000509009 SLC35E1Q96K37 410 aa9.02□□□□□ -0.97
PDPN-208ENST00000509009 XCL2Q9UBD3 114 aa9.02□□□□□ -0.97
PDPN-208ENST00000509009 PFDN2Q9UHV9 154 aa9.02□□□□□ -0.97
PDPN-208ENST00000509009 V9GYH0 126 aa9.02□□□□□ -0.97
PDPN-208ENST00000509009 HLA-DRB4P13762 266 aa9.01□□□□□ -0.97
PDPN-208ENST00000509009 NKX2-1P43699 371 aaPredicted RBP9.01□□□□□ -0.97
PDPN-208ENST00000509009 AP3S2P59780 193 aa9.01□□□□□ -0.97
PDPN-208ENST00000509009 NUTF2P61970 127 aaKnown RBP9.01□□□□□ -0.97
PDPN-208ENST00000509009 OR2F1Q13607 317 aa9.01□□□□□ -0.97
PDPN-208ENST00000509009 C1orf194Q5T5A4 169 aa9.01□□□□□ -0.97
PDPN-208ENST00000509009 Q6ZTC4 211 aa9.01□□□□□ -0.97
PDPN-208ENST00000509009 SLC25A21Q9BQT8 299 aaPredicted RBP9.01□□□□□ -0.97
PDPN-208ENST00000509009 C1QTNF4Q9BXJ3 329 aa9.01□□□□□ -0.97
PDPN-208ENST00000509009 WDR12Q9GZL7 423 aaKnown RBP9.01□□□□□ -0.97
PDPN-208ENST00000509009 HLA-DRB4X5D2U9 266 aa9.01□□□□□ -0.97
PDPN-208ENST00000509009 IGKV1OR2-108A0A075B7D4 117 aa9□□□□□ -0.97
PDPN-208ENST00000509009 TRAV10A0A0B4J240 114 aa9□□□□□ -0.97
PDPN-208ENST00000509009 SFT2D2O95562 160 aa9□□□□□ -0.97
PDPN-208ENST00000509009 FABP1P07148 127 aa9□□□□□ -0.97
PDPN-208ENST00000509009 IAPPP10997 89 aa9□□□□□ -0.97
PDPN-208ENST00000509009 VAMP1P23763 118 aa9□□□□□ -0.97
PDPN-208ENST00000509009 NUP62P37198 522 aaPredicted RBP9□□□□□ -0.97
PDPN-208ENST00000509009 DEFB1P60022 68 aa9□□□□□ -0.97
PDPN-208ENST00000509009 RAB11AP62491 216 aa9□□□□□ -0.97
PDPN-208ENST00000509009 ZNF79Q15937 498 aa9□□□□□ -0.97
PDPN-208ENST00000509009 C12orf74Q32Q52 190 aa9□□□□□ -0.97
PDPN-208ENST00000509009 GDF5OSQ5U4N7 250 aa9□□□□□ -0.97
PDPN-208ENST00000509009 LINC00052Q96N35 136 aa9□□□□□ -0.97
PDPN-208ENST00000509009 TRGV9Q99603 122 aa9□□□□□ -0.97
PDPN-208ENST00000509009 MED6O75586 246 aa8.99□□□□□ -0.97
PDPN-208ENST00000509009 ID1P41134 155 aa8.99□□□□□ -0.97
PDPN-208ENST00000509009 LYZP61626 148 aa8.99□□□□□ -0.97
PDPN-208ENST00000509009 PPP1R1AQ13522 171 aa8.99□□□□□ -0.97
PDPN-208ENST00000509009 GSG1LQ6UXU4 331 aa8.99□□□□□ -0.97
PDPN-208ENST00000509009 CCDC190Q86UF4 302 aa8.99□□□□□ -0.97
PDPN-208ENST00000509009 CENPSQ8N2Z9 138 aa8.99□□□□□ -0.97
PDPN-208ENST00000509009 THAP8Q8NA92 274 aa8.99□□□□□ -0.97
PDPN-208ENST00000509009 DEDD2Q8WXF8 326 aa8.99□□□□□ -0.97
PDPN-208ENST00000509009 CLUHP3Q96NS8 147 aa8.99□□□□□ -0.97
PDPN-208ENST00000509009 MAGT1Q9H0U3 335 aa8.99□□□□□ -0.97
PDPN-208ENST00000509009 SAV1Q9H4B6 383 aaPredicted RBP8.99□□□□□ -0.97
PDPN-208ENST00000509009 PAIP2BQ9ULR5 123 aaKnown RBP8.99□□□□□ -0.97
PDPN-208ENST00000509009 CELA1Q9UNI1 258 aa8.99□□□□□ -0.97
PDPN-208ENST00000509009 TMED3Q9Y3Q3 217 aa8.99□□□□□ -0.97
PDPN-208ENST00000509009 IGHV4-4A0A075B6R2 117 aa8.98□□□□□ -0.97
PDPN-208ENST00000509009 PRSS46E5RG02 174 aa8.98□□□□□ -0.97
PDPN-208ENST00000509009 SOCS3O14543 225 aa8.98□□□□□ -0.97
PDPN-208ENST00000509009 SYNGR2O43760 224 aa8.98□□□□□ -0.97
PDPN-208ENST00000509009 IGKV3-20P01619 116 aa8.98□□□□□ -0.97
PDPN-208ENST00000509009 HOXB5P09067 269 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms