RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 CLN5O75503 358 aa11.92□□□□□ -0.5
LMNA-222ENST00000508500 DFFBO76075 338 aa11.92□□□□□ -0.5
LMNA-222ENST00000508500 HOXB5P09067 269 aa11.92□□□□□ -0.5
LMNA-222ENST00000508500 PET100P0DJ07 73 aa11.92□□□□□ -0.5
LMNA-222ENST00000508500 IL15RAQ13261 267 aa11.92□□□□□ -0.5
LMNA-222ENST00000508500 TMEM170AQ8WVE7 144 aa11.92□□□□□ -0.5
LMNA-222ENST00000508500 RRNAD1Q96FB5 475 aaKnown RBP11.92□□□□□ -0.5
LMNA-222ENST00000508500 CACFD1Q9UGQ2 172 aa11.92□□□□□ -0.5
LMNA-222ENST00000508500 FAM25EA8MYX2 175 aa11.91□□□□□ -0.5
LMNA-222ENST00000508500 ADAP1O75689 374 aa11.91□□□□□ -0.5
LMNA-222ENST00000508500 JTBO76095 146 aa11.91□□□□□ -0.5
LMNA-222ENST00000508500 SIX6O95475 246 aa11.91□□□□□ -0.5
LMNA-222ENST00000508500 SLC25A4P12235 298 aa11.91□□□□□ -0.5
LMNA-222ENST00000508500 LYZL2Q7Z4W2 148 aa11.91□□□□□ -0.5
LMNA-222ENST00000508500 OR4X1Q8NH49 305 aa11.91□□□□□ -0.5
LMNA-222ENST00000508500 OR52E5Q8NH55 327 aa11.91□□□□□ -0.5
LMNA-222ENST00000508500 GINS3Q9BRX5 216 aa11.91□□□□□ -0.5
LMNA-222ENST00000508500 MS4A6AQ9H2W1 248 aa11.91□□□□□ -0.5
LMNA-222ENST00000508500 PRR13Q9NZ81 148 aa11.91□□□□□ -0.5
LMNA-222ENST00000508500 CORTO00230 105 aa11.9□□□□□ -0.5
LMNA-222ENST00000508500 CCSO14618 274 aa11.9□□□□□ -0.5
LMNA-222ENST00000508500 IGKV1-17P01599 117 aa11.9□□□□□ -0.5
LMNA-222ENST00000508500 SUB1P53999 127 aaKnown RBP eCLIP11.9□□□□□ -0.5
LMNA-222ENST00000508500 SPCS3P61009 180 aa11.9□□□□□ -0.5
LMNA-222ENST00000508500 PMS2P11Q13670 270 aa11.9□□□□□ -0.5
LMNA-222ENST00000508500 IAH1Q2TAA2 248 aaPredicted RBP11.9□□□□□ -0.5
LMNA-222ENST00000508500 NMSQ5H8A3 153 aa11.9□□□□□ -0.5
LMNA-222ENST00000508500 ZBTB8BQ8NAP8 495 aaPredicted RBP11.9□□□□□ -0.5
LMNA-222ENST00000508500 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.9□□□□□ -0.5
LMNA-222ENST00000508500 CACNG5Q9UF02 275 aa11.9□□□□□ -0.5
LMNA-222ENST00000508500 C4BPBP20851 252 aa11.89□□□□□ -0.51
LMNA-222ENST00000508500 OPRK1P41145 380 aa11.89□□□□□ -0.51
LMNA-222ENST00000508500 TIGITQ495A1 244 aa11.89□□□□□ -0.51
LMNA-222ENST00000508500 RNASE11Q8TAA1 199 aaKnown RBP11.89□□□□□ -0.51
LMNA-222ENST00000508500 THAP6Q8TBB0 222 aa11.89□□□□□ -0.51
LMNA-222ENST00000508500 PPP1R1CQ8WVI7 109 aa11.89□□□□□ -0.51
LMNA-222ENST00000508500 CSTL1Q9H114 145 aa11.89□□□□□ -0.51
LMNA-222ENST00000508500 ENY2Q9NPA8 101 aa11.89□□□□□ -0.51
LMNA-222ENST00000508500 G3V3Q6 166 aa11.88□□□□□ -0.51
LMNA-222ENST00000508500 NXPH3O95157 252 aa11.88□□□□□ -0.51
LMNA-222ENST00000508500 MPC2O95563 127 aa11.88□□□□□ -0.51
LMNA-222ENST00000508500 RLN2P04090 185 aa11.88□□□□□ -0.51
LMNA-222ENST00000508500 CRYBB3P26998 211 aa11.88□□□□□ -0.51
LMNA-222ENST00000508500 CMC4P56277 68 aaPredicted RBP11.88□□□□□ -0.51
LMNA-222ENST00000508500 DEFB131AP59861 70 aa11.88□□□□□ -0.51
LMNA-222ENST00000508500 C2orf83Q53S99 150 aa11.88□□□□□ -0.51
LMNA-222ENST00000508500 LEMD1Q68G75 181 aa11.88□□□□□ -0.51
LMNA-222ENST00000508500 LINC00476Q8WZB0 136 aa11.88□□□□□ -0.51
LMNA-222ENST00000508500 KRTAP17-1Q9BYP8 105 aa11.88□□□□□ -0.51
LMNA-222ENST00000508500 FRAS1Q86XX4 4008 aa11.88□□□□□ -0.51
LMNA-222ENST00000508500 CXorf65A6NEN9 183 aa11.87□□□□□ -0.51
LMNA-222ENST00000508500 FAM90A26D6RGX4 464 aa11.87□□□□□ -0.51
LMNA-222ENST00000508500 IGLC1P0CG04 106 aa11.87□□□□□ -0.51
LMNA-222ENST00000508500 ATF4P18848 351 aaPredicted RBP11.87□□□□□ -0.51
LMNA-222ENST00000508500 NPPCP23582 126 aa11.87□□□□□ -0.51
LMNA-222ENST00000508500 HTR2BP41595 481 aa11.87□□□□□ -0.51
LMNA-222ENST00000508500 SMCO1Q147U7 214 aa11.87□□□□□ -0.51
LMNA-222ENST00000508500 PRSS54Q6PEW0 395 aa11.87□□□□□ -0.51
LMNA-222ENST00000508500 OR4D5Q8NGN0 318 aa11.87□□□□□ -0.51
LMNA-222ENST00000508500 HEYLQ9NQ87 328 aaPredicted RBP11.87□□□□□ -0.51
LMNA-222ENST00000508500 U3KQE9 123 aa11.87□□□□□ -0.51
LMNA-222ENST00000508500 TRAV2A0A0B4J234 112 aa11.86□□□□□ -0.51
LMNA-222ENST00000508500 MPTX1A8MV57 137 aa11.86□□□□□ -0.51
LMNA-222ENST00000508500 K7EQG2 157 aa11.86□□□□□ -0.51
LMNA-222ENST00000508500 PITX3O75364 302 aa11.86□□□□□ -0.51
LMNA-222ENST00000508500 CD5P06127 495 aa11.86□□□□□ -0.51
LMNA-222ENST00000508500 PAFAH1B2P68402 229 aa11.86□□□□□ -0.51
LMNA-222ENST00000508500 CEMP1Q6PRD7 247 aaPredicted RBP11.86□□□□□ -0.51
LMNA-222ENST00000508500 GSKIPQ9P0R6 139 aa11.86□□□□□ -0.51
LMNA-222ENST00000508500 VPS13DQ5THJ4 4388 aa11.86□□□□□ -0.51
LMNA-222ENST00000508500 DNASE2O00115 360 aaPredicted RBP11.85□□□□□ -0.51
LMNA-222ENST00000508500 GIG44P09565 113 aaPredicted RBP11.85□□□□□ -0.51
LMNA-222ENST00000508500 NKX2-1P43699 371 aaPredicted RBP11.85□□□□□ -0.51
LMNA-222ENST00000508500 P2RY1P47900 373 aa11.85□□□□□ -0.51
LMNA-222ENST00000508500 RND2P52198 227 aa11.85□□□□□ -0.51
LMNA-222ENST00000508500 RPL11P62913 178 aaKnown RBP11.85□□□□□ -0.51
LMNA-222ENST00000508500 ID3Q02535 119 aa11.85□□□□□ -0.51
LMNA-222ENST00000508500 ZNF345Q14585 488 aa11.85□□□□□ -0.51
LMNA-222ENST00000508500 SLC24A4Q8NFF2 622 aa11.85□□□□□ -0.51
LMNA-222ENST00000508500 OR11H4Q8NGC9 324 aa11.85□□□□□ -0.51
LMNA-222ENST00000508500 DCANP1Q8TF63 244 aa11.85□□□□□ -0.51
LMNA-222ENST00000508500 RARRES2Q99969 163 aa11.85□□□□□ -0.51
LMNA-222ENST00000508500 TRAV30A0A087WSZ9 112 aa11.84□□□□□ -0.51
LMNA-222ENST00000508500 A0A0D9SG52 128 aa11.84□□□□□ -0.51
LMNA-222ENST00000508500 NUPR2A6NF83 97 aa11.84□□□□□ -0.51
LMNA-222ENST00000508500 CEBPZOSA8MTT3 80 aa11.84□□□□□ -0.51
LMNA-222ENST00000508500 SMLR1H3BR10 107 aa11.84□□□□□ -0.51
LMNA-222ENST00000508500 MED6O75586 246 aa11.84□□□□□ -0.51
LMNA-222ENST00000508500 PVALBP20472 110 aaPredicted RBP11.84□□□□□ -0.51
LMNA-222ENST00000508500 NUP62P37198 522 aaPredicted RBP11.84□□□□□ -0.51
LMNA-222ENST00000508500 OR2F1Q13607 317 aa11.84□□□□□ -0.51
LMNA-222ENST00000508500 RAB32Q13637 225 aa11.84□□□□□ -0.51
LMNA-222ENST00000508500 ZNF546Q86UE3 836 aa11.84□□□□□ -0.51
LMNA-222ENST00000508500 RNASEH2CQ8TDP1 164 aaKnown RBP11.84□□□□□ -0.51
LMNA-222ENST00000508500 GATAD1Q8WUU5 269 aa11.84□□□□□ -0.51
LMNA-222ENST00000508500 METTL26Q96S19 204 aa11.84□□□□□ -0.51
LMNA-222ENST00000508500 RABAC1Q9UI14 185 aa11.84□□□□□ -0.51
LMNA-222ENST00000508500 DNAH10Q8IVF4 4471 aa11.84□□□□□ -0.51
LMNA-222ENST00000508500 A0A1W2PS18 150 aa11.83□□□□□ -0.52
LMNA-222ENST00000508500 E5RGE8 158 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms