RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 H2BFSP57053 126 aa11.29□□□□□ -0.6
RNF4-210ENST00000508235 STX12Q86Y82 276 aa11.29□□□□□ -0.6
RNF4-210ENST00000508235 C11orf1Q9H5F2 150 aa11.29□□□□□ -0.6
RNF4-210ENST00000508235 VSIRQ9H7M9 311 aa11.29□□□□□ -0.6
RNF4-210ENST00000508235 NPVFQ9HCQ7 196 aa11.29□□□□□ -0.6
RNF4-210ENST00000508235 IGHV3-49A0A0A0MS15 119 aa11.28□□□□□ -0.6
RNF4-210ENST00000508235 E5RGE8 158 aa11.28□□□□□ -0.6
RNF4-210ENST00000508235 S100A7P31151 101 aa11.28□□□□□ -0.6
RNF4-210ENST00000508235 EIF2B2P49770 351 aaKnown RBP11.28□□□□□ -0.6
RNF4-210ENST00000508235 CD81P60033 236 aa11.28□□□□□ -0.6
RNF4-210ENST00000508235 PAFAH1B2P68402 229 aa11.28□□□□□ -0.6
RNF4-210ENST00000508235 HBG1P69891 147 aa11.28□□□□□ -0.6
RNF4-210ENST00000508235 HBG2P69892 147 aa11.28□□□□□ -0.6
RNF4-210ENST00000508235 ZNF90Q03938 601 aa11.28□□□□□ -0.6
RNF4-210ENST00000508235 RNF125Q96EQ8 232 aa11.28□□□□□ -0.6
RNF4-210ENST00000508235 RNF2Q99496 336 aa11.28□□□□□ -0.6
RNF4-210ENST00000508235 NEURL2Q9BR09 285 aa11.28□□□□□ -0.6
RNF4-210ENST00000508235 MED28Q9H204 178 aa11.28□□□□□ -0.6
RNF4-210ENST00000508235 RABAC1Q9UI14 185 aa11.28□□□□□ -0.6
RNF4-210ENST00000508235 IGKV1OR2-108A0A075B7D4 117 aa11.27□□□□□ -0.61
RNF4-210ENST00000508235 FAM24AA6NFZ4 105 aa11.27□□□□□ -0.61
RNF4-210ENST00000508235 OR4C46A6NHA9 309 aa11.27□□□□□ -0.61
RNF4-210ENST00000508235 CCNKO75909 580 aa11.27□□□□□ -0.61
RNF4-210ENST00000508235 SULT1A1P50225 295 aa11.27□□□□□ -0.61
RNF4-210ENST00000508235 RRAS2P62070 204 aaPredicted RBP11.27□□□□□ -0.61
RNF4-210ENST00000508235 LRRC37A5PQ49AS3 106 aa11.27□□□□□ -0.61
RNF4-210ENST00000508235 Q8N1Y9 231 aa11.27□□□□□ -0.61
RNF4-210ENST00000508235 TMEM252Q8N6L7 170 aa11.27□□□□□ -0.61
RNF4-210ENST00000508235 BPIFCQ8NFQ6 507 aa11.27□□□□□ -0.61
RNF4-210ENST00000508235 PPP1R1CQ8WVI7 109 aa11.27□□□□□ -0.61
RNF4-210ENST00000508235 ST8SIA2Q92186 375 aa11.27□□□□□ -0.61
RNF4-210ENST00000508235 SLC25A31Q9H0C2 315 aa11.27□□□□□ -0.61
RNF4-210ENST00000508235 SELENOKQ9Y6D0 94 aa11.27□□□□□ -0.61
RNF4-210ENST00000508235 IGHV3OR16-13A0A075B7E8 117 aa11.26□□□□□ -0.61
RNF4-210ENST00000508235 IGHV3-74A0A0B4J1X5 117 aa11.26□□□□□ -0.61
RNF4-210ENST00000508235 A8MZ25 164 aa11.26□□□□□ -0.61
RNF4-210ENST00000508235 APOHP02749 345 aaPredicted RBP11.26□□□□□ -0.61
RNF4-210ENST00000508235 S100A11P31949 105 aa11.26□□□□□ -0.61
RNF4-210ENST00000508235 P2RY1P47900 373 aa11.26□□□□□ -0.61
RNF4-210ENST00000508235 CMC4P56277 68 aaPredicted RBP11.26□□□□□ -0.61
RNF4-210ENST00000508235 SELENOTP62341 195 aa11.26□□□□□ -0.61
RNF4-210ENST00000508235 SLC38A11Q08AI6 406 aa11.26□□□□□ -0.61
RNF4-210ENST00000508235 OXA1LQ15070 435 aa11.26□□□□□ -0.61
RNF4-210ENST00000508235 USF2Q15853 346 aaPredicted RBP11.26□□□□□ -0.61
RNF4-210ENST00000508235 FAM90A2PQ658T7 463 aa11.26□□□□□ -0.61
RNF4-210ENST00000508235 TEPPQ6URK8 271 aa11.26□□□□□ -0.61
RNF4-210ENST00000508235 TCF24Q7RTU0 167 aa11.26□□□□□ -0.61
RNF4-210ENST00000508235 LILRB2Q8N423 598 aa11.26□□□□□ -0.61
RNF4-210ENST00000508235 B9D2Q9BPU9 175 aa11.26□□□□□ -0.61
RNF4-210ENST00000508235 PBDC1Q9BVG4 233 aa11.26□□□□□ -0.61
RNF4-210ENST00000508235 U3KQE9 123 aa11.26□□□□□ -0.61
RNF4-210ENST00000508235 MEGF8Q7Z7M0 2845 aa11.26□□□□□ -0.61
RNF4-210ENST00000508235 CMYA5Q8N3K9 4069 aa11.25□□□□□ -0.61
RNF4-210ENST00000508235 CST7O76096 145 aa11.25□□□□□ -0.61
RNF4-210ENST00000508235 IGHV4-30-4P0DP06 118 aa11.25□□□□□ -0.61
RNF4-210ENST00000508235 AP2S1P53680 142 aaPredicted RBP11.25□□□□□ -0.61
RNF4-210ENST00000508235 LYZP61626 148 aa11.25□□□□□ -0.61
RNF4-210ENST00000508235 RPL11P62913 178 aaKnown RBP11.25□□□□□ -0.61
RNF4-210ENST00000508235 ARL16Q0P5N6 197 aa11.25□□□□□ -0.61
RNF4-210ENST00000508235 OR2F1Q13607 317 aa11.25□□□□□ -0.61
RNF4-210ENST00000508235 RAB31Q13636 194 aa11.25□□□□□ -0.61
RNF4-210ENST00000508235 ATP6V1FQ16864 119 aa11.25□□□□□ -0.61
RNF4-210ENST00000508235 CYP2G1PQ6ZSU1 146 aa11.25□□□□□ -0.61
RNF4-210ENST00000508235 TMEM217Q8N7C4 229 aa11.25□□□□□ -0.61
RNF4-210ENST00000508235 ASB13Q8WXK3 278 aa11.25□□□□□ -0.61
RNF4-210ENST00000508235 TUBA4BQ9H853 241 aa11.25□□□□□ -0.61
RNF4-210ENST00000508235 TRAV2A0A0B4J234 112 aa11.24□□□□□ -0.61
RNF4-210ENST00000508235 IGHV3-66A0A0C4DH42 116 aa11.24□□□□□ -0.61
RNF4-210ENST00000508235 IGSF23A1L1A6 192 aa11.24□□□□□ -0.61
RNF4-210ENST00000508235 HELTA6NFD8 242 aa11.24□□□□□ -0.61
RNF4-210ENST00000508235 OR11H12B2RN74 326 aa11.24□□□□□ -0.61
RNF4-210ENST00000508235 DFFBO76075 338 aa11.24□□□□□ -0.61
RNF4-210ENST00000508235 CD7P09564 240 aa11.24□□□□□ -0.61
RNF4-210ENST00000508235 BAXQ07812 192 aa11.24□□□□□ -0.61
RNF4-210ENST00000508235 S100A7AQ86SG5 101 aa11.24□□□□□ -0.61
RNF4-210ENST00000508235 FAM110AQ9BQ89 295 aa11.24□□□□□ -0.61
RNF4-210ENST00000508235 SLC45A2Q9UMX9 530 aa11.24□□□□□ -0.61
RNF4-210ENST00000508235 DNASE2O00115 360 aaPredicted RBP11.23□□□□□ -0.61
RNF4-210ENST00000508235 BUB3O43684 328 aa11.23□□□□□ -0.61
RNF4-210ENST00000508235 MPC2O95563 127 aa11.23□□□□□ -0.61
RNF4-210ENST00000508235 FRMD6-AS1P0C7T7 363 aa11.23□□□□□ -0.61
RNF4-210ENST00000508235 C1orf194Q5T5A4 169 aa11.23□□□□□ -0.61
RNF4-210ENST00000508235 C16orf54Q6UWD8 224 aa11.23□□□□□ -0.61
RNF4-210ENST00000508235 ZNF546Q86UE3 836 aa11.23□□□□□ -0.61
RNF4-210ENST00000508235 PPP1R14BQ96C90 147 aa11.23□□□□□ -0.61
RNF4-210ENST00000508235 TMEM147Q9BVK8 224 aa11.23□□□□□ -0.61
RNF4-210ENST00000508235 UQCC1Q9NVA1 299 aa11.23□□□□□ -0.61
RNF4-210ENST00000508235 OR5AC2Q9NZP5 309 aa11.23□□□□□ -0.61
RNF4-210ENST00000508235 FBXL17Q9UF56 701 aa11.23□□□□□ -0.61
RNF4-210ENST00000508235 IGKV3-7A0A075B6H7 116 aa11.22□□□□□ -0.61
RNF4-210ENST00000508235 CXCL3P19876 107 aa11.22□□□□□ -0.61
RNF4-210ENST00000508235 FCN2Q15485 313 aa11.22□□□□□ -0.61
RNF4-210ENST00000508235 VWC2Q2TAL6 325 aa11.22□□□□□ -0.61
RNF4-210ENST00000508235 PXDC1Q5TGL8 231 aa11.22□□□□□ -0.61
RNF4-210ENST00000508235 GLMPQ8WWB7 406 aa11.22□□□□□ -0.61
RNF4-210ENST00000508235 C19orf73Q9NVV2 129 aa11.22□□□□□ -0.61
RNF4-210ENST00000508235 RNF24Q9Y225 148 aa11.22□□□□□ -0.61
RNF4-210ENST00000508235 H0YIZ8 118 aa11.21□□□□□ -0.61
RNF4-210ENST00000508235 AGPAT2O15120 278 aa11.21□□□□□ -0.61
RNF4-210ENST00000508235 LINC00869P0C866 280 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms