RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 FAM122CQ6P4D5 195 aa10.79□□□□□ -0.68
SERF1B-204ENST00000506542 UQCC3Q6UW78 93 aa10.79□□□□□ -0.68
SERF1B-204ENST00000506542 SLC35E3Q7Z769 313 aa10.79□□□□□ -0.68
SERF1B-204ENST00000506542 OR4X1Q8NH49 305 aa10.79□□□□□ -0.68
SERF1B-204ENST00000506542 TRGV9Q99603 122 aa10.79□□□□□ -0.68
SERF1B-204ENST00000506542 CITED2Q99967 270 aaPredicted RBP10.79□□□□□ -0.68
SERF1B-204ENST00000506542 ACTR3CQ9C0K3 210 aaPredicted RBP10.79□□□□□ -0.68
SERF1B-204ENST00000506542 SLC25A22Q9H936 323 aa10.79□□□□□ -0.68
SERF1B-204ENST00000506542 THYN1Q9P016 225 aa10.79□□□□□ -0.68
SERF1B-204ENST00000506542 TRAV41A0A0B4J266 112 aa10.79□□□□□ -0.68
SERF1B-204ENST00000506542 A0A1B0GV50 99 aa10.79□□□□□ -0.68
SERF1B-204ENST00000506542 MAP1LC3B2A6NCE7 125 aa10.79□□□□□ -0.68
SERF1B-204ENST00000506542 CDC34P49427 236 aaPredicted RBP10.79□□□□□ -0.68
SERF1B-204ENST00000506542 SELENOTP62341 195 aa10.79□□□□□ -0.68
SERF1B-204ENST00000506542 OR5AU1Q8NGC0 362 aa10.79□□□□□ -0.68
SERF1B-204ENST00000506542 MAP1LC3BQ9GZQ8 125 aa10.79□□□□□ -0.68
SERF1B-204ENST00000506542 I3L521 148 aa10.78□□□□□ -0.68
SERF1B-204ENST00000506542 GATA2P23769 480 aaPredicted RBP10.78□□□□□ -0.68
SERF1B-204ENST00000506542 CCL20P78556 96 aa10.78□□□□□ -0.68
SERF1B-204ENST00000506542 ZNF90Q03938 601 aa10.78□□□□□ -0.68
SERF1B-204ENST00000506542 LCN15Q6UWW0 184 aa10.78□□□□□ -0.68
SERF1B-204ENST00000506542 LCNL1Q6ZST4 164 aa10.78□□□□□ -0.68
SERF1B-204ENST00000506542 RAB24Q969Q5 203 aa10.78□□□□□ -0.68
SERF1B-204ENST00000506542 ANAPC16Q96DE5 110 aa10.78□□□□□ -0.68
SERF1B-204ENST00000506542 TRBV9A0A0B4J1U6 114 aa10.77□□□□□ -0.69
SERF1B-204ENST00000506542 PRSS47A8MTI9 375 aa10.77□□□□□ -0.69
SERF1B-204ENST00000506542 ADARB2-AS1A8MUL3 147 aa10.77□□□□□ -0.69
SERF1B-204ENST00000506542 CLN5O75503 358 aa10.77□□□□□ -0.69
SERF1B-204ENST00000506542 OR2J3O76001 311 aa10.77□□□□□ -0.69
SERF1B-204ENST00000506542 NDUFB8O95169 186 aa10.77□□□□□ -0.69
SERF1B-204ENST00000506542 IGLC1P0CG04 106 aa10.77□□□□□ -0.69
SERF1B-204ENST00000506542 FGF8P55075 233 aaPredicted RBP10.77□□□□□ -0.69
SERF1B-204ENST00000506542 FAM210AQ96ND0 272 aa10.77□□□□□ -0.69
SERF1B-204ENST00000506542 SCRT1Q9BWW7 348 aa10.77□□□□□ -0.69
SERF1B-204ENST00000506542 ZNF580Q9UK33 172 aa10.77□□□□□ -0.69
SERF1B-204ENST00000506542 A0A1W2PPV4 95 aa10.76□□□□□ -0.69
SERF1B-204ENST00000506542 ANKRD34BA5PLL1 514 aa10.76□□□□□ -0.69
SERF1B-204ENST00000506542 MFAP4P55083 255 aa10.76□□□□□ -0.69
SERF1B-204ENST00000506542 SRSF3P84103 164 aaKnown RBP10.76□□□□□ -0.69
SERF1B-204ENST00000506542 C21orf62-AS1Q17RA5 79 aa10.76□□□□□ -0.69
SERF1B-204ENST00000506542 FBXL7Q9UJT9 491 aa10.76□□□□□ -0.69
SERF1B-204ENST00000506542 NOTCH3Q9UM47 2321 aa10.76□□□□□ -0.69
SERF1B-204ENST00000506542 PSMB11A5LHX3 300 aa10.76□□□□□ -0.69
SERF1B-204ENST00000506542 AP4M1O00189 453 aa10.76□□□□□ -0.69
SERF1B-204ENST00000506542 HMGB3O15347 200 aaKnown RBP10.76□□□□□ -0.69
SERF1B-204ENST00000506542 EIF3GO75821 320 aaKnown RBP eCLIP10.76□□□□□ -0.69
SERF1B-204ENST00000506542 NPBWR1P48145 328 aa10.76□□□□□ -0.69
SERF1B-204ENST00000506542 RHOBP62745 196 aa10.76□□□□□ -0.69
SERF1B-204ENST00000506542 GUK1Q16774 197 aa10.76□□□□□ -0.69
SERF1B-204ENST00000506542 TOR2AQ5JU69 321 aa10.76□□□□□ -0.69
SERF1B-204ENST00000506542 C18orf65Q6ZTR6 163 aa10.76□□□□□ -0.69
SERF1B-204ENST00000506542 VN1R17PQ8TDU5 208 aa10.76□□□□□ -0.69
SERF1B-204ENST00000506542 ZNF355PQ9NSJ1 428 aa10.76□□□□□ -0.69
SERF1B-204ENST00000506542 C21orf62Q9NYP8 219 aa10.76□□□□□ -0.69
SERF1B-204ENST00000506542 F8W735 103 aaPredicted RBP10.75□□□□□ -0.69
SERF1B-204ENST00000506542 M0QZ24 198 aa10.75□□□□□ -0.69
SERF1B-204ENST00000506542 IGKV1-17P01599 117 aa10.75□□□□□ -0.69
SERF1B-204ENST00000506542 CD5P06127 495 aa10.75□□□□□ -0.69
SERF1B-204ENST00000506542 RHOGP84095 191 aa10.75□□□□□ -0.69
SERF1B-204ENST00000506542 DEFA5Q01523 94 aa10.75□□□□□ -0.69
SERF1B-204ENST00000506542 NECAP1Q8NC96 275 aa10.75□□□□□ -0.69
SERF1B-204ENST00000506542 GATAD1Q8WUU5 269 aa10.75□□□□□ -0.69
SERF1B-204ENST00000506542 PBDC1Q9BVG4 233 aa10.75□□□□□ -0.69
SERF1B-204ENST00000506542 SEPSECSQ9HD40 501 aaKnown RBP10.75□□□□□ -0.69
SERF1B-204ENST00000506542 S4R3C0 116 aa10.75□□□□□ -0.69
SERF1B-204ENST00000506542 TRAV30A0A087WSZ9 112 aa10.74□□□□□ -0.69
SERF1B-204ENST00000506542 BRI3O95415 125 aa10.74□□□□□ -0.69
SERF1B-204ENST00000506542 OR5G3P0C626 314 aa10.74□□□□□ -0.69
SERF1B-204ENST00000506542 STAG3L2P0CL84 134 aa10.74□□□□□ -0.69
SERF1B-204ENST00000506542 STAG3L3P0CL85 134 aa10.74□□□□□ -0.69
SERF1B-204ENST00000506542 PPIFP30405 207 aaKnown RBP10.74□□□□□ -0.69
SERF1B-204ENST00000506542 FCGR2BP31994 310 aaPredicted RBP10.74□□□□□ -0.69
SERF1B-204ENST00000506542 PMS2P11Q13670 270 aa10.74□□□□□ -0.69
SERF1B-204ENST00000506542 C15orf32Q32M92 178 aa10.74□□□□□ -0.69
SERF1B-204ENST00000506542 TIGITQ495A1 244 aa10.74□□□□□ -0.69
SERF1B-204ENST00000506542 KHDC1LQ5JSQ8 128 aa10.74□□□□□ -0.69
SERF1B-204ENST00000506542 TMEM37Q8WXS4 190 aa10.74□□□□□ -0.69
SERF1B-204ENST00000506542 PFDN5Q99471 154 aa10.74□□□□□ -0.69
SERF1B-204ENST00000506542 TXN2Q99757 166 aa10.74□□□□□ -0.69
SERF1B-204ENST00000506542 TMEM231Q9H6L2 316 aa10.74□□□□□ -0.69
SERF1B-204ENST00000506542 FUT9Q9Y231 359 aa10.74□□□□□ -0.69
SERF1B-204ENST00000506542 KRBOX1C9JBD0 128 aa10.73□□□□□ -0.69
SERF1B-204ENST00000506542 H3BUA1 57 aa10.73□□□□□ -0.69
SERF1B-204ENST00000506542 GNG7O60262 68 aa10.73□□□□□ -0.69
SERF1B-204ENST00000506542 ZP3P21754 424 aa10.73□□□□□ -0.69
SERF1B-204ENST00000506542 PLP1P60201 277 aa10.73□□□□□ -0.69
SERF1B-204ENST00000506542 FAM78BQ5VT40 261 aa10.73□□□□□ -0.69
SERF1B-204ENST00000506542 SPATA31B1PQ5VZV4 182 aa10.73□□□□□ -0.69
SERF1B-204ENST00000506542 OR1L4Q8NGR5 311 aa10.73□□□□□ -0.69
SERF1B-204ENST00000506542 RNF2Q99496 336 aa10.73□□□□□ -0.69
SERF1B-204ENST00000506542 MRPL32Q9BYC8 188 aaKnown RBP10.73□□□□□ -0.69
SERF1B-204ENST00000506542 EIF5A2Q9GZV4 153 aaKnown RBP10.73□□□□□ -0.69
SERF1B-204ENST00000506542 DNAJC4Q9NNZ3 241 aa10.73□□□□□ -0.69
SERF1B-204ENST00000506542 TREM1Q9NP99 234 aa10.73□□□□□ -0.69
SERF1B-204ENST00000506542 RBFOX3A6NFN3 312 aa10.73□□□□□ -0.69
SERF1B-204ENST00000506542 FAM223BA6NKX1 122 aa10.73□□□□□ -0.69
SERF1B-204ENST00000506542 COX7A2P2O60397 106 aa10.73□□□□□ -0.69
SERF1B-204ENST00000506542 FABP1P07148 127 aa10.73□□□□□ -0.69
SERF1B-204ENST00000506542 PSG1P11464 419 aa10.73□□□□□ -0.69
SERF1B-204ENST00000506542 CFHR3Q02985 330 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms