RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 CELA1Q9UNI1 258 aa15.14■□□□□ 0.01
SQSTM1-210ENST00000506042 RABL2BQ9UNT1 228 aa15.14■□□□□ 0.01
SQSTM1-210ENST00000506042 FRAS1Q86XX4 4008 aa15.13■□□□□ 0.01
SQSTM1-210ENST00000506042 CD74P04233 296 aa15.13■□□□□ 0.01
SQSTM1-210ENST00000506042 PSMB3P49720 205 aa15.13■□□□□ 0.01
SQSTM1-210ENST00000506042 USF2Q15853 346 aaPredicted RBP15.13■□□□□ 0.01
SQSTM1-210ENST00000506042 EBLN2Q6P2I7 272 aa15.13■□□□□ 0.01
SQSTM1-210ENST00000506042 IL22RA2Q969J5 263 aa15.13■□□□□ 0.01
SQSTM1-210ENST00000506042 PPP1R14BQ96C90 147 aa15.13■□□□□ 0.01
SQSTM1-210ENST00000506042 RNF125Q96EQ8 232 aa15.13■□□□□ 0.01
SQSTM1-210ENST00000506042 SLC35E1Q96K37 410 aa15.13■□□□□ 0.01
SQSTM1-210ENST00000506042 PRRT1Q99946 306 aa15.13■□□□□ 0.01
SQSTM1-210ENST00000506042 PBDC1Q9BVG4 233 aa15.13■□□□□ 0.01
SQSTM1-210ENST00000506042 KMT2AQ03164 3969 aa15.12■□□□□ 0.01
SQSTM1-210ENST00000506042 IGHV3OR16-12A0A075B7B8 117 aa15.12■□□□□ 0.01
SQSTM1-210ENST00000506042 ZFP92A6NM28 416 aa15.12■□□□□ 0.01
SQSTM1-210ENST00000506042 RGS5O15539 181 aa15.12■□□□□ 0.01
SQSTM1-210ENST00000506042 HBE1P02100 147 aa15.12■□□□□ 0.01
SQSTM1-210ENST00000506042 EMP1P54849 157 aa15.12■□□□□ 0.01
SQSTM1-210ENST00000506042 KLF9Q13886 244 aaPredicted RBP15.12■□□□□ 0.01
SQSTM1-210ENST00000506042 C1orf194Q5T5A4 169 aa15.12■□□□□ 0.01
SQSTM1-210ENST00000506042 FOXI2Q6ZQN5 318 aa15.12■□□□□ 0.01
SQSTM1-210ENST00000506042 ZNF767PQ75MW2 155 aa15.12■□□□□ 0.01
SQSTM1-210ENST00000506042 GLYATL2Q8WU03 294 aa15.12■□□□□ 0.01
SQSTM1-210ENST00000506042 LINC00052Q96N35 136 aa15.12■□□□□ 0.01
SQSTM1-210ENST00000506042 CLUHP3Q96NS8 147 aa15.12■□□□□ 0.01
SQSTM1-210ENST00000506042 C7orf50Q9BRJ6 194 aaKnown RBP15.12■□□□□ 0.01
SQSTM1-210ENST00000506042 AGRNO00468 2067 aa15.12■□□□□ 0.01
SQSTM1-210ENST00000506042 A0A0G2JRQ6 117 aa15.11■□□□□ 0.01
SQSTM1-210ENST00000506042 ANXA3P12429 323 aa15.11■□□□□ 0.01
SQSTM1-210ENST00000506042 MEOX2P50222 304 aa15.11■□□□□ 0.01
SQSTM1-210ENST00000506042 SRPXP78539 464 aa15.11■□□□□ 0.01
SQSTM1-210ENST00000506042 RNF212Q495C1 297 aa15.11■□□□□ 0.01
SQSTM1-210ENST00000506042 ZNF705AQ6ZN79 300 aaPredicted RBP15.11■□□□□ 0.01
SQSTM1-210ENST00000506042 NIPSNAP3BQ9BS92 247 aa15.11■□□□□ 0.01
SQSTM1-210ENST00000506042 ZNF705FA8MVS1 300 aaPredicted RBP15.1■□□□□ 0.01
SQSTM1-210ENST00000506042 M0R2N4 97 aa15.1■□□□□ 0.01
SQSTM1-210ENST00000506042 ZNF705DP0CH99 300 aaPredicted RBP15.1■□□□□ 0.01
SQSTM1-210ENST00000506042 ZNF705BP0CI00 300 aaPredicted RBP15.1■□□□□ 0.01
SQSTM1-210ENST00000506042 AKAIN1P0CW23 69 aa15.1■□□□□ 0.01
SQSTM1-210ENST00000506042 PSG1P11464 419 aa15.1■□□□□ 0.01
SQSTM1-210ENST00000506042 Q6ZRM9 215 aa15.1■□□□□ 0.01
SQSTM1-210ENST00000506042 SELENOHQ8IZQ5 122 aaKnown RBP15.1■□□□□ 0.01
SQSTM1-210ENST00000506042 LGI3Q8N145 548 aa15.1■□□□□ 0.01
SQSTM1-210ENST00000506042 OR4B1Q8NGF8 309 aa15.1■□□□□ 0.01
SQSTM1-210ENST00000506042 SCP2D1Q9UJQ7 156 aa15.1■□□□□ 0.01
SQSTM1-210ENST00000506042 CRYM-AS1A6NIL9 109 aa15.09■□□□□ 0.01
SQSTM1-210ENST00000506042 CFDP00746 253 aaPredicted RBP15.09■□□□□ 0.01
SQSTM1-210ENST00000506042 CCR6P51684 374 aa15.09■□□□□ 0.01
SQSTM1-210ENST00000506042 SUPT4H1P63272 117 aaKnown RBP15.09■□□□□ 0.01
SQSTM1-210ENST00000506042 OXA1LQ15070 435 aa15.09■□□□□ 0.01
SQSTM1-210ENST00000506042 NMSQ5H8A3 153 aa15.09■□□□□ 0.01
SQSTM1-210ENST00000506042 DTD1Q8TEA8 209 aa15.09■□□□□ 0.01
SQSTM1-210ENST00000506042 GPR146Q96CH1 333 aa15.09■□□□□ 0.01
SQSTM1-210ENST00000506042 TMEM208Q9BTX3 173 aa15.09■□□□□ 0.01
SQSTM1-210ENST00000506042 SAV1Q9H4B6 383 aaPredicted RBP15.09■□□□□ 0.01
SQSTM1-210ENST00000506042 RPRMQ9NS64 109 aa15.09■□□□□ 0.01
SQSTM1-210ENST00000506042 TMED3Q9Y3Q3 217 aa15.09■□□□□ 0.01
SQSTM1-210ENST00000506042 SNRPGP15A8MWD9 76 aa15.08■□□□□ 0
SQSTM1-210ENST00000506042 ISLRO14498 428 aa15.08■□□□□ 0
SQSTM1-210ENST00000506042 IGKV3-20P01619 116 aa15.08■□□□□ 0
SQSTM1-210ENST00000506042 AKR1C4P17516 323 aa15.08■□□□□ 0
SQSTM1-210ENST00000506042 GPX4P36969 197 aaPredicted RBP15.08■□□□□ 0
SQSTM1-210ENST00000506042 FAM3BP58499 235 aaPredicted RBP15.08■□□□□ 0
SQSTM1-210ENST00000506042 RAB11AP62491 216 aa15.08■□□□□ 0
SQSTM1-210ENST00000506042 OR4D10Q8NGI6 311 aa15.08■□□□□ 0
SQSTM1-210ENST00000506042 TMEM56-RWDD3S4R434 201 aa15.08■□□□□ 0
SQSTM1-210ENST00000506042 PSG9Q00887 426 aa15.07■□□□□ 0
SQSTM1-210ENST00000506042 SMCO1Q147U7 214 aa15.07■□□□□ 0
SQSTM1-210ENST00000506042 RRN3P1Q2M238 152 aa15.07■□□□□ 0
SQSTM1-210ENST00000506042 OR8I2Q8N0Y5 310 aa15.07■□□□□ 0
SQSTM1-210ENST00000506042 MAGT1Q9H0U3 335 aa15.07■□□□□ 0
SQSTM1-210ENST00000506042 A0A1B0GVY2 172 aa15.06■□□□□ 0
SQSTM1-210ENST00000506042 HTN3P15516 51 aa15.06■□□□□ 0
SQSTM1-210ENST00000506042 GALR1P47211 349 aa15.06■□□□□ 0
SQSTM1-210ENST00000506042 RPP30P78346 268 aaKnown RBP15.06■□□□□ 0
SQSTM1-210ENST00000506042 C15orf53Q8NAA6 179 aa15.06■□□□□ 0
SQSTM1-210ENST00000506042 RTBDNQ9BSG5 229 aaPredicted RBP15.06■□□□□ 0
SQSTM1-210ENST00000506042 DKK2Q9UBU2 259 aa15.06■□□□□ 0
SQSTM1-210ENST00000506042 LYZP61626 148 aa15.05■□□□□ -0
SQSTM1-210ENST00000506042 B2MP61769 119 aa15.05■□□□□ -0
SQSTM1-210ENST00000506042 DAD1P61803 113 aa15.05■□□□□ -0
SQSTM1-210ENST00000506042 FAM222AQ5U5X8 452 aa15.05■□□□□ -0
SQSTM1-210ENST00000506042 GSG1LQ6UXU4 331 aa15.05■□□□□ -0
SQSTM1-210ENST00000506042 CLVS1Q8IUQ0 354 aaPredicted RBP15.05■□□□□ -0
SQSTM1-210ENST00000506042 OR1S1Q8NH92 325 aa15.05■□□□□ -0
SQSTM1-210ENST00000506042 SMIM4Q8WVI0 70 aa15.05■□□□□ -0
SQSTM1-210ENST00000506042 ATG101Q9BSB4 218 aa15.05■□□□□ -0
SQSTM1-210ENST00000506042 HSPB7Q9UBY9 170 aa15.05■□□□□ -0
SQSTM1-210ENST00000506042 GPR132Q9UNW8 380 aa15.05■□□□□ -0
SQSTM1-210ENST00000506042 A0A0B4J2A0 478 aa15.04■□□□□ -0
SQSTM1-210ENST00000506042 LOC102723971A0A1B0GUV8 181 aa15.04■□□□□ -0
SQSTM1-210ENST00000506042 NXPH3O95157 252 aa15.04■□□□□ -0
SQSTM1-210ENST00000506042 GGNBP1Q5YKI7 109 aa15.04■□□□□ -0
SQSTM1-210ENST00000506042 LHFPL5Q8TAF8 219 aa15.04■□□□□ -0
SQSTM1-210ENST00000506042 SHPKQ9UHJ6 478 aa15.04■□□□□ -0
SQSTM1-210ENST00000506042 ALDH3B2P48448 385 aa15.03■□□□□ -0
SQSTM1-210ENST00000506042 PAX9P55771 341 aa15.03■□□□□ -0
SQSTM1-210ENST00000506042 IL18Q14116 193 aa15.03■□□□□ -0
SQSTM1-210ENST00000506042 C1orf134Q5TEV5 83 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms