RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 GUSBP1Q15486 140 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 CT45A1Q5HYN5 189 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 C12orf54Q6X4T0 127 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 LCNL1Q6ZST4 164 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 MOGAT3Q86VF5 341 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 DEFB123Q8N688 67 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 CT45A3Q8NHU0 189 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 C18orf15Q96N68 181 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 PRO3102Q9H379 93 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 hADV38S2A0JD32 116 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 P01737 135 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 HLA-DRB1P01911 266 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 APOHP02749 345 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-208ENST00000504387 HIST1H1EP10412 219 aaKnown RBP6.19□□□□□ -1.42
NEDD9-208ENST00000504387 IGHV1-2P23083 117 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 RTL8BQ17RB0 113 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 RUSC1-AS1Q66K80 236 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 PRNTQ86SH4 94 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 OR4S2Q8NH73 311 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 PRSS3P2Q8NHM4 247 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 GTSF1Q8WW33 167 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 MBD6Q96DN6 1003 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 IGF2BP2-AS1Q96M15 143 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 CLUHP3Q96NS8 147 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 IDI2-AS1Q9NZ38 188 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 MRPL36Q9P0J6 103 aaKnown RBP6.19□□□□□ -1.42
NEDD9-208ENST00000504387 C15orf61A6NNL5 157 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 LOXL1Q08397 574 aaPredicted RBP6.18□□□□□ -1.42
NEDD9-208ENST00000504387 SMIM21Q3B7S5 101 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 LINC00305Q7Z4B0 112 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 ZCCHC24Q8N2G6 241 aaKnown RBP6.18□□□□□ -1.42
NEDD9-208ENST00000504387 SLC25A2Q9BXI2 301 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 IFI27L2Q9H2X8 130 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 TNRC6AQ8NDV7 1962 aaKnown RBP6.18□□□□□ -1.42
NEDD9-208ENST00000504387 C15orf65H3BRN8 121 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 COL8A1P27658 744 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 PLP1P60201 277 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 HBBP68871 147 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 FAM120AOSQ5T036 256 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 C10orf113Q5VZT2 155 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 C5orf17Q8NAS9 161 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 FER1L6-AS2Q96M78 137 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 MRPL27Q9P0M9 148 aaKnown RBP6.18□□□□□ -1.42
NEDD9-208ENST00000504387 PEF1Q9UBV8 284 aaKnown RBP6.18□□□□□ -1.42
NEDD9-208ENST00000504387 S4R3C0 116 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 IGKV1D-17A0A075B6S4 117 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 C21orf140B9A014 251 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 K7ERJ3 54 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 FAM87AP0C7U9 286 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 TMEM97Q5BJF2 176 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 TIMM23BQ5SRD1 257 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 SFTA2Q6UW10 78 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 EXOC3-AS1Q8N2X6 119 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 GRAMD2BQ96HH9 432 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 COMMD5Q9GZQ3 224 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 RABAC1Q9UI14 185 aa6.18□□□□□ -1.42
NEDD9-208ENST00000504387 ASH1LQ9NR48 2969 aaKnown RBP6.17□□□□□ -1.42
NEDD9-208ENST00000504387 CEP295Q9C0D2 2601 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 TECTAO75443 2155 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 ENSAO43768 121 aaKnown RBP6.17□□□□□ -1.42
NEDD9-208ENST00000504387 SS18L1O75177 396 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-208ENST00000504387 IGLC1P0CG04 106 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 GCSHP23434 173 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 RHOGP84095 191 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 DEFB109BQ30KR1 87 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 ITLN1Q8WWA0 313 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 ST20Q9HBF5 79 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 CALYQ9NYX4 217 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 COL6A6A6NMZ7 2263 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 A0A1W2PNU3 283 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-208ENST00000504387 SMKR1H3BMG3 65 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 DIAPH2-AS1Q14236 149 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 KIR3DS1Q14943 382 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 ZNF329Q86UD4 541 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 PDPNQ86YL7 162 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 PCP2Q8IVA1 136 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 OR10AG1Q8NH19 301 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 SRSF12Q8WXF0 261 aaKnown RBP6.17□□□□□ -1.42
NEDD9-208ENST00000504387 TMEM186Q96B77 213 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 CCL13Q99616 98 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 LINC00470Q9BZP3 86 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 SCRT2Q9NQ03 307 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 C1RLQ9NZP8 487 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 APC2O95996 2303 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 DSCAMO60469 2012 aa6.17□□□□□ -1.42
NEDD9-208ENST00000504387 IGKV3D-15A0A087WSY6 115 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 TEX50A0A1B0GTY4 177 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 ADH4P08319 380 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 SAA1P0DJI8 122 aaPredicted RBP6.16□□□□□ -1.42
NEDD9-208ENST00000504387 CFHR2P36980 270 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 CACNG7P62955 275 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 PATE2Q6UY27 113 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 TMEM178AQ8NBL3 297 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 H1FXQ92522 213 aaKnown RBP6.16□□□□□ -1.42
NEDD9-208ENST00000504387 FAM167A-AS1Q96KT0 104 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 SPCS1Q9Y6A9 102 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 A0A0G2JLM5 398 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 SPAARA0A1B0GVQ0 90 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 J3QW42 95 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 CD5LO43866 347 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms