RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 OR51G1Q8NGK1 321 aa8.42□□□□□ -1.06
VCAN-205ENST00000503923 METTL26Q96S19 204 aa8.42□□□□□ -1.06
VCAN-205ENST00000503923 RNF126Q9BV68 326 aa8.42□□□□□ -1.06
VCAN-205ENST00000503923 AURKAIP1Q9NWT8 199 aaPredicted RBP8.42□□□□□ -1.06
VCAN-205ENST00000503923 MLXQ9UH92 298 aa8.42□□□□□ -1.06
VCAN-205ENST00000503923 SMPXQ9UHP9 88 aa8.42□□□□□ -1.06
VCAN-205ENST00000503923 A0A1W2PS18 150 aa8.41□□□□□ -1.06
VCAN-205ENST00000503923 CHEK1O14757 476 aa8.41□□□□□ -1.06
VCAN-205ENST00000503923 CFDP00746 253 aaPredicted RBP8.41□□□□□ -1.06
VCAN-205ENST00000503923 PRB2P02812 416 aaPredicted RBP8.41□□□□□ -1.06
VCAN-205ENST00000503923 GP9P14770 177 aa8.41□□□□□ -1.06
VCAN-205ENST00000503923 EWSR1Q01844 656 aaKnown RBP eCLIP8.41□□□□□ -1.06
VCAN-205ENST00000503923 BAXQ07812 192 aa8.41□□□□□ -1.06
VCAN-205ENST00000503923 ATP6V1FQ16864 119 aa8.41□□□□□ -1.06
VCAN-205ENST00000503923 LAMTOR1Q6IAA8 161 aa8.41□□□□□ -1.06
VCAN-205ENST00000503923 TEPPQ6URK8 271 aa8.41□□□□□ -1.06
VCAN-205ENST00000503923 LILRB2Q8N423 598 aa8.41□□□□□ -1.06
VCAN-205ENST00000503923 THAP6Q8TBB0 222 aa8.41□□□□□ -1.06
VCAN-205ENST00000503923 RNF125Q96EQ8 232 aa8.41□□□□□ -1.06
VCAN-205ENST00000503923 NARS2Q96I59 477 aaKnown RBP8.41□□□□□ -1.06
VCAN-205ENST00000503923 RHPN1-AS1Q9BWJ2 59 aa8.41□□□□□ -1.06
VCAN-205ENST00000503923 MBD2Q9UBB5 411 aa8.41□□□□□ -1.06
VCAN-205ENST00000503923 IGHV3-49A0A0A0MS15 119 aa8.4□□□□□ -1.06
VCAN-205ENST00000503923 TRAV25A0A0B4J276 109 aa8.4□□□□□ -1.06
VCAN-205ENST00000503923 WI2-2373I1.2A0A1W2PRP0 233 aa8.4□□□□□ -1.06
VCAN-205ENST00000503923 HNRNPCP07910 306 aaKnown RBP eCLIP8.4□□□□□ -1.06
VCAN-205ENST00000503923 LYL1P12980 280 aa8.4□□□□□ -1.06
VCAN-205ENST00000503923 CRYBB3P26998 211 aa8.4□□□□□ -1.06
VCAN-205ENST00000503923 RAP2BP61225 183 aa8.4□□□□□ -1.06
VCAN-205ENST00000503923 FGL1Q08830 312 aa8.4□□□□□ -1.06
VCAN-205ENST00000503923 OR2F1Q13607 317 aa8.4□□□□□ -1.06
VCAN-205ENST00000503923 USF2Q15853 346 aaPredicted RBP8.4□□□□□ -1.06
VCAN-205ENST00000503923 RBPMS2Q6ZRY4 209 aaKnown RBP8.4□□□□□ -1.06
VCAN-205ENST00000503923 CYP2G1PQ6ZSU1 146 aa8.4□□□□□ -1.06
VCAN-205ENST00000503923 BPIFCQ8NFQ6 507 aa8.4□□□□□ -1.06
VCAN-205ENST00000503923 PRR25Q96S07 402 aa8.4□□□□□ -1.06
VCAN-205ENST00000503923 TMEM147Q9BVK8 224 aa8.4□□□□□ -1.06
VCAN-205ENST00000503923 TMEM231Q9H6L2 316 aa8.4□□□□□ -1.06
VCAN-205ENST00000503923 VSIRQ9H7M9 311 aa8.4□□□□□ -1.06
VCAN-205ENST00000503923 UQCC1Q9NVA1 299 aa8.4□□□□□ -1.06
VCAN-205ENST00000503923 RABAC1Q9UI14 185 aa8.4□□□□□ -1.06
VCAN-205ENST00000503923 MEGF8Q7Z7M0 2845 aa8.39□□□□□ -1.07
VCAN-205ENST00000503923 IGHV3OR16-13A0A075B7E8 117 aa8.39□□□□□ -1.07
VCAN-205ENST00000503923 IGHV3-74A0A0B4J1X5 117 aa8.39□□□□□ -1.07
VCAN-205ENST00000503923 IZUMO1RA6ND01 250 aa8.39□□□□□ -1.07
VCAN-205ENST00000503923 APOHP02749 345 aaPredicted RBP8.39□□□□□ -1.07
VCAN-205ENST00000503923 CD5P06127 495 aa8.39□□□□□ -1.07
VCAN-205ENST00000503923 LYZP61626 148 aa8.39□□□□□ -1.07
VCAN-205ENST00000503923 SELENOTP62341 195 aa8.39□□□□□ -1.07
VCAN-205ENST00000503923 NHLH2Q02577 135 aa8.39□□□□□ -1.07
VCAN-205ENST00000503923 GUCA2BQ16661 112 aa8.39□□□□□ -1.07
VCAN-205ENST00000503923 VWC2Q2TAL6 325 aa8.39□□□□□ -1.07
VCAN-205ENST00000503923 TMEM61Q8N0U2 210 aa8.39□□□□□ -1.07
VCAN-205ENST00000503923 ST8SIA2Q92186 375 aa8.39□□□□□ -1.07
VCAN-205ENST00000503923 GRAMD2BQ96HH9 432 aa8.39□□□□□ -1.07
VCAN-205ENST00000503923 RNF2Q99496 336 aa8.39□□□□□ -1.07
VCAN-205ENST00000503923 PBDC1Q9BVG4 233 aa8.39□□□□□ -1.07
VCAN-205ENST00000503923 PFDN2Q9UHV9 154 aa8.39□□□□□ -1.07
VCAN-205ENST00000503923 LSM4Q9Y4Z0 139 aaKnown RBP8.39□□□□□ -1.07
VCAN-205ENST00000503923 SELENOKQ9Y6D0 94 aa8.39□□□□□ -1.07
VCAN-205ENST00000503923 U3KQE9 123 aa8.39□□□□□ -1.07
VCAN-205ENST00000503923 IGHV3-66A0A0C4DH42 116 aa8.38□□□□□ -1.07
VCAN-205ENST00000503923 UBE2L5PA0A1B0GUS4 154 aa8.38□□□□□ -1.07
VCAN-205ENST00000503923 ZNF785A8K8V0 405 aa8.38□□□□□ -1.07
VCAN-205ENST00000503923 TSPAN4O14817 238 aa8.38□□□□□ -1.07
VCAN-205ENST00000503923 GATA2P23769 480 aaPredicted RBP8.38□□□□□ -1.07
VCAN-205ENST00000503923 RPL12P30050 165 aaKnown RBP8.38□□□□□ -1.07
VCAN-205ENST00000503923 NUP62P37198 522 aaPredicted RBP8.38□□□□□ -1.07
VCAN-205ENST00000503923 EIF2B2P49770 351 aaKnown RBP8.38□□□□□ -1.07
VCAN-205ENST00000503923 RAB31Q13636 194 aa8.38□□□□□ -1.07
VCAN-205ENST00000503923 TMEM182Q6ZP80 229 aaPredicted RBP8.38□□□□□ -1.07
VCAN-205ENST00000503923 ZNF546Q86UE3 836 aa8.38□□□□□ -1.07
VCAN-205ENST00000503923 OR5C1Q8NGR4 320 aa8.38□□□□□ -1.07
VCAN-205ENST00000503923 SPAG8Q99932 426 aaPredicted RBP8.38□□□□□ -1.07
VCAN-205ENST00000503923 WDR83OSQ9Y284 106 aa8.38□□□□□ -1.07
VCAN-205ENST00000503923 HSPB11Q9Y547 144 aa8.38□□□□□ -1.07
VCAN-205ENST00000503923 K7EIL1 84 aa8.37□□□□□ -1.07
VCAN-205ENST00000503923 AGPAT2O15120 278 aa8.37□□□□□ -1.07
VCAN-205ENST00000503923 S100A7P31151 101 aa8.37□□□□□ -1.07
VCAN-205ENST00000503923 CAMLGP49069 296 aa8.37□□□□□ -1.07
VCAN-205ENST00000503923 FAM90A2PQ658T7 463 aa8.37□□□□□ -1.07
VCAN-205ENST00000503923 Q6ZNX1 250 aa8.37□□□□□ -1.07
VCAN-205ENST00000503923 TCF24Q7RTU0 167 aa8.37□□□□□ -1.07
VCAN-205ENST00000503923 GTSCR1Q86UQ5 136 aa8.37□□□□□ -1.07
VCAN-205ENST00000503923 OR2T35Q8NGX2 323 aa8.37□□□□□ -1.07
VCAN-205ENST00000503923 MRAPQ8TCY5 172 aa8.37□□□□□ -1.07
VCAN-205ENST00000503923 MGST2Q99735 147 aa8.37□□□□□ -1.07
VCAN-205ENST00000503923 SLC45A2Q9UMX9 530 aa8.37□□□□□ -1.07
VCAN-205ENST00000503923 BUB3O43684 328 aa8.36□□□□□ -1.07
VCAN-205ENST00000503923 MPDU1O75352 247 aa8.36□□□□□ -1.07
VCAN-205ENST00000503923 DFFBO76075 338 aa8.36□□□□□ -1.07
VCAN-205ENST00000503923 LINC00869P0C866 280 aa8.36□□□□□ -1.07
VCAN-205ENST00000503923 ORM2P19652 201 aa8.36□□□□□ -1.07
VCAN-205ENST00000503923 FGF7P21781 194 aa8.36□□□□□ -1.07
VCAN-205ENST00000503923 PLP1P60201 277 aa8.36□□□□□ -1.07
VCAN-205ENST00000503923 PAFAH1B2P68402 229 aa8.36□□□□□ -1.07
VCAN-205ENST00000503923 CLINT1Q14677 625 aa8.36□□□□□ -1.07
VCAN-205ENST00000503923 Q5BKY6 102 aa8.36□□□□□ -1.07
VCAN-205ENST00000503923 PXDC1Q5TGL8 231 aa8.36□□□□□ -1.07
VCAN-205ENST00000503923 C16orf54Q6UWD8 224 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms