RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.29□□□□□ -2.04
NEDD4-204ENST00000503468 PIGTQ969N2 578 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 C1QTNF4Q9BXJ3 329 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 NXF5Q9H1B4 397 aaKnown RBP2.29□□□□□ -2.04
NEDD4-204ENST00000503468 GCM1Q9NP62 436 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 LOXL2Q9Y4K0 774 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 SPEGQ15772 3267 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 A0A1B0GWB2 263 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 H3BMG7 143 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 SLC31A1O15431 190 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 CD38P28907 300 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 TWIST1Q15672 202 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 FAM180AQ6UWF9 173 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 ZNF611Q8N823 705 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 RAB37Q96AX2 223 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 NDFIP1Q9BT67 221 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 SERTAD4Q9NUC0 356 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 TSSC4Q9Y5U2 329 aaPredicted RBP2.28□□□□□ -2.04
NEDD4-204ENST00000503468 TRBV20OR9-2A0A075B6H5 130 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 ATP5LO75964 103 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 C8orf88P0DMB2 117 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 MYCNOSP40205 109 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 OR3A4PP47883 348 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 ZNF83P51522 516 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 CLDN2P57739 230 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 GNB1P62873 340 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 PLGLAQ15195 96 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 ETDBQ3ZM63 59 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 GCSAMLQ5JQS6 135 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 UTF1Q5T230 341 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 H2BFWTQ7Z2G1 175 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 TEN1Q86WV5 123 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 TPRX1Q8N7U7 411 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 OR1L4Q8NGR5 311 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 TM2D2Q9BX73 214 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 YAE1D1Q9NRH1 226 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 ZNF492Q9P255 531 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 TNFRSF18Q9Y5U5 241 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 COL7A1Q02388 2944 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 IGKV1-9A0A0C4DH69 117 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 PGLYRP1O75594 196 aaPredicted RBP2.28□□□□□ -2.04
NEDD4-204ENST00000503468 IGKV1D-16P01601 117 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 SPINK8P0C7L1 97 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 CLDN17P56750 224 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 LINC00310P59036 64 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 PAX8Q06710 450 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 TEX36Q5VZQ5 186 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 RBPMS2Q6ZRY4 209 aaKnown RBP2.28□□□□□ -2.04
NEDD4-204ENST00000503468 OR10X1Q8NGY0 326 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 PRSS3P2Q8NHM4 247 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 COPS9Q8WXC6 57 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 DLX4Q92988 240 aaPredicted RBP2.28□□□□□ -2.04
NEDD4-204ENST00000503468 CNFNQ9BYD5 112 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 RTN4RQ9BZR6 473 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 IMUPQ9GZP8 106 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 WNT10AQ9GZT5 417 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 AMMECR1Q9Y4X0 333 aaPredicted RBP2.28□□□□□ -2.04
NEDD4-204ENST00000503468 DIDO1Q9BTC0 2240 aaKnown RBP2.28□□□□□ -2.04
NEDD4-204ENST00000503468 M0QXV9 152 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 SNCGO76070 127 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 PVRP15151 417 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 KIR2DS2P43631 304 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 DLX6P56179 175 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 BRWD1-AS2P59051 145 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 PLP2Q04941 152 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 PSG7Q13046 419 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 C5orf47Q569G3 176 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 SEM1Q6ZVN7 128 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 Q8N976 141 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 OR1L1Q8NH94 360 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 COQ2Q96H96 371 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 FAM103A1Q9BTL3 118 aaKnown RBP2.28□□□□□ -2.04
NEDD4-204ENST00000503468 VCANP13611 3396 aa2.28□□□□□ -2.04
NEDD4-204ENST00000503468 BIRC6Q9NR09 4857 aa2.28□□□□□ -2.05
NEDD4-204ENST00000503468 C5orf49A4QMS7 147 aa2.28□□□□□ -2.05
NEDD4-204ENST00000503468 J3QT63 122 aa2.28□□□□□ -2.05
NEDD4-204ENST00000503468 SCGB1C2P0DMR2 95 aa2.28□□□□□ -2.05
NEDD4-204ENST00000503468 SRD5A1P18405 259 aa2.28□□□□□ -2.05
NEDD4-204ENST00000503468 BCL3P20749 454 aa2.28□□□□□ -2.05
NEDD4-204ENST00000503468 CDKN1AP38936 164 aa2.28□□□□□ -2.05
NEDD4-204ENST00000503468 FOLR3P41439 243 aa2.28□□□□□ -2.05
NEDD4-204ENST00000503468 DUSP3P51452 185 aaPredicted RBP2.28□□□□□ -2.05
NEDD4-204ENST00000503468 GNG3P63215 75 aa2.28□□□□□ -2.05
NEDD4-204ENST00000503468 CENPWQ5EE01 88 aa2.28□□□□□ -2.05
NEDD4-204ENST00000503468 RND1Q92730 232 aa2.28□□□□□ -2.05
NEDD4-204ENST00000503468 HARBI1Q96MB7 349 aa2.28□□□□□ -2.05
NEDD4-204ENST00000503468 LIME1Q9H400 295 aa2.28□□□□□ -2.05
NEDD4-204ENST00000503468 IL36RNQ9UBH0 155 aa2.28□□□□□ -2.05
NEDD4-204ENST00000503468 C19orf25Q9UFG5 118 aaPredicted RBP2.28□□□□□ -2.05
NEDD4-204ENST00000503468 LHFPL6Q9Y693 200 aa2.28□□□□□ -2.05
NEDD4-204ENST00000503468 V9GYV3 84 aa2.28□□□□□ -2.05
NEDD4-204ENST00000503468 JMJD1CQ15652 2540 aa2.27□□□□□ -2.05
NEDD4-204ENST00000503468 OOEPA6NGQ2 149 aa2.27□□□□□ -2.05
NEDD4-204ENST00000503468 E9PLD3 99 aa2.27□□□□□ -2.05
NEDD4-204ENST00000503468 GLI4P10075 376 aa2.27□□□□□ -2.05
NEDD4-204ENST00000503468 CD33P20138 364 aa2.27□□□□□ -2.05
NEDD4-204ENST00000503468 EFNA4P52798 201 aa2.27□□□□□ -2.05
NEDD4-204ENST00000503468 MZT1Q08AG7 82 aa2.27□□□□□ -2.05
NEDD4-204ENST00000503468 ZNF726P1Q15940 193 aa2.27□□□□□ -2.05
NEDD4-204ENST00000503468 FGFRL1Q8N441 504 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms