RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 ZNF90Q03938 601 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 FOXE3Q13461 319 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 ZNF726P1Q15940 193 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 TIGITQ495A1 244 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 FAM78BQ5VT40 261 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 C10orf113Q5VZT2 155 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 LCN15Q6UWW0 184 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 ZNF600Q6ZNG1 722 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 SUN5Q8TC36 379 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 TMEM190Q8WZ59 177 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 NOL4LQ96MY1 436 aaPredicted RBP6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 CITED4Q96RK1 184 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 TMEM167BQ9NRX6 74 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 ARL2-SNX15V9GYD0 113 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 ITPR2Q14571 2701 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 PSMB11A5LHX3 300 aa6.33□□□□□ -1.4
TOPBP1-202ENST00000503338 RBFOX3A6NFN3 312 aa6.33□□□□□ -1.4
TOPBP1-202ENST00000503338 F8W735 103 aaPredicted RBP6.33□□□□□ -1.4
TOPBP1-202ENST00000503338 BMPR1BO00238 502 aa6.33□□□□□ -1.4
TOPBP1-202ENST00000503338 TGOLN2O43493 480 aa6.33□□□□□ -1.4
TOPBP1-202ENST00000503338 CLEC3BP05452 202 aa6.33□□□□□ -1.4
TOPBP1-202ENST00000503338 PSMB8P28062 276 aa6.33□□□□□ -1.4
TOPBP1-202ENST00000503338 GUK1Q16774 197 aa6.33□□□□□ -1.4
TOPBP1-202ENST00000503338 OR1B1Q8NGR6 318 aa6.33□□□□□ -1.4
TOPBP1-202ENST00000503338 WFDC12Q8WWY7 111 aa6.33□□□□□ -1.4
TOPBP1-202ENST00000503338 RNF125Q96EQ8 232 aa6.33□□□□□ -1.4
TOPBP1-202ENST00000503338 MS4A10Q96PG2 267 aa6.33□□□□□ -1.4
TOPBP1-202ENST00000503338 EIF5A2Q9GZV4 153 aaKnown RBP6.33□□□□□ -1.4
TOPBP1-202ENST00000503338 LINC00527Q9UJ94 153 aa6.33□□□□□ -1.4
TOPBP1-202ENST00000503338 HIGD1AQ9Y241 93 aa6.33□□□□□ -1.4
TOPBP1-202ENST00000503338 VPS13CQ709C8 3753 aa6.33□□□□□ -1.4
TOPBP1-202ENST00000503338 FLNAP21333 2647 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 WI2-2373I1.2A0A1W2PRP0 233 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 FAM181BA6NEQ2 426 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 OR2T8A6NH00 312 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 HSPB1P04792 205 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 IL4P05112 153 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 CD5P06127 495 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 CTSGP08311 255 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 BCL2P10415 239 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 ORM2P19652 201 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 GATA2P23769 480 aaPredicted RBP6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 GPR183P32249 361 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 LYZP61626 148 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 GCSAMLQ5JQS6 135 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 ZNF506Q5JVG8 444 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 ZNF343Q6P1L6 599 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 CLEC19AQ6UXS0 136 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 Q6ZS46 218 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 LINC00305Q7Z4B0 112 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 ZNF491Q8N8L2 437 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 RNF152Q8N8N0 203 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 TMEM37Q8WXS4 190 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 CCDC140Q96MF4 163 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 SMR3AQ99954 134 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 NKX6-2Q9C056 277 aaPredicted RBP6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 C16orf95Q9H693 158 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 SEPSECSQ9HD40 501 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 TREM1Q9NP99 234 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 MRPL27Q9P0M9 148 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 GNG13Q9P2W3 67 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 VAX2Q9UIW0 290 aa6.32□□□□□ -1.4
TOPBP1-202ENST00000503338 TLN2Q9Y4G6 2542 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 A0A1B0GV50 99 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 I3L521 148 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 NDUFA4O00483 81 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 OR7C2O60412 319 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 NDUFA7O95182 113 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 ARL14EPLP0DKL9 152 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 GCHFRP30047 84 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 ARL3P36405 182 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 FGF8P55075 233 aaPredicted RBP6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 TOR2AQ5JU69 321 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 SSX7Q7RTT5 188 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 IQCF2Q8IXL9 164 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 OR4X2Q8NGF9 303 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 MYOZ3Q8TDC0 251 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 NARS2Q96I59 477 aaKnown RBP6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 UBE2E2Q96LR5 201 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 DUX5Q96PT3 197 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 SLC25A39Q9BZJ4 359 aaPredicted RBP6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 GSX1Q9H4S2 264 aaPredicted RBP6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 GNB4Q9HAV0 340 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 ESM1Q9NQ30 184 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 SERTAD4Q9NUC0 356 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 DOK5Q9P104 306 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 RABAC1Q9UI14 185 aa6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 PUS1Q9Y606 427 aaKnown RBP eCLIP6.31□□□□□ -1.4
TOPBP1-202ENST00000503338 LOC102723971A0A1B0GUV8 181 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 TMEM218A2RU14 115 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 H3BRN7 92 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 TCF21O43680 179 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 GGCTO75223 188 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 CRLF1O75462 422 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 IGHV3-23P01764 117 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 ZP3P21754 424 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 BMI1P35226 326 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 ADMP35318 185 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 CCL20P78556 96 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms