RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 TMEM241Q24JQ0 296 aa17.28■□□□□ 0.36
PTPN13-205ENST00000502971 ZNF674Q2M3X9 581 aa17.28■□□□□ 0.36
PTPN13-205ENST00000502971 MORN5Q5VZ52 161 aa17.28■□□□□ 0.36
PTPN13-205ENST00000502971 KRTAP1-3Q8IUG1 177 aa17.28■□□□□ 0.36
PTPN13-205ENST00000502971 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.28■□□□□ 0.36
PTPN13-205ENST00000502971 RD3LP0DJH9 198 aa17.27■□□□□ 0.36
PTPN13-205ENST00000502971 KIAA0141Q14154 515 aaPredicted RBP17.27■□□□□ 0.36
PTPN13-205ENST00000502971 ECSCRQ19T08 205 aa17.27■□□□□ 0.36
PTPN13-205ENST00000502971 MAPK1IP1LQ8NDC0 245 aa17.27■□□□□ 0.36
PTPN13-205ENST00000502971 STXBP6Q8NFX7 210 aa17.27■□□□□ 0.36
PTPN13-205ENST00000502971 UHRF2Q96PU4 802 aa17.27■□□□□ 0.36
PTPN13-205ENST00000502971 C21orf62Q9NYP8 219 aa17.27■□□□□ 0.36
PTPN13-205ENST00000502971 PITPNC1Q9UKF7 332 aa17.27■□□□□ 0.36
PTPN13-205ENST00000502971 SOX21Q9Y651 276 aaPredicted RBP17.27■□□□□ 0.36
PTPN13-205ENST00000502971 PDZD2O15018 2839 aa17.27■□□□□ 0.35
PTPN13-205ENST00000502971 H3BUX3 64 aa17.27■□□□□ 0.35
PTPN13-205ENST00000502971 M0QZK8 103 aa17.27■□□□□ 0.35
PTPN13-205ENST00000502971 GNG7O60262 68 aa17.27■□□□□ 0.35
PTPN13-205ENST00000502971 NDUFB8O95169 186 aa17.27■□□□□ 0.35
PTPN13-205ENST00000502971 TOMM40O96008 361 aa17.27■□□□□ 0.35
PTPN13-205ENST00000502971 AMY1AP04745 511 aa17.27■□□□□ 0.35
PTPN13-205ENST00000502971 NPPCP23582 126 aa17.27■□□□□ 0.35
PTPN13-205ENST00000502971 OR51G1Q8NGK1 321 aa17.27■□□□□ 0.35
PTPN13-205ENST00000502971 Q96MF0 132 aa17.27■□□□□ 0.35
PTPN13-205ENST00000502971 TXN2Q99757 166 aa17.27■□□□□ 0.35
PTPN13-205ENST00000502971 PAXXQ9BUH6 204 aa17.27■□□□□ 0.35
PTPN13-205ENST00000502971 OR2J3O76001 311 aa17.26■□□□□ 0.35
PTPN13-205ENST00000502971 CRIP2P52943 208 aaPredicted RBP17.26■□□□□ 0.35
PTPN13-205ENST00000502971 YPEL3P61236 119 aaPredicted RBP17.26■□□□□ 0.35
PTPN13-205ENST00000502971 C16orf82Q7Z2V1 217 aa17.26■□□□□ 0.35
PTPN13-205ENST00000502971 VN1R17PQ8TDU5 208 aa17.26■□□□□ 0.35
PTPN13-205ENST00000502971 OR51M1Q9H341 326 aa17.26■□□□□ 0.35
PTPN13-205ENST00000502971 FBXL7Q9UJT9 491 aa17.26■□□□□ 0.35
PTPN13-205ENST00000502971 HIGD1AQ9Y241 93 aa17.26■□□□□ 0.35
PTPN13-205ENST00000502971 CSMD1Q96PZ7 3565 aa17.26■□□□□ 0.35
PTPN13-205ENST00000502971 A0A1W2PRE2 83 aa17.25■□□□□ 0.35
PTPN13-205ENST00000502971 SCGB2A1O75556 95 aa17.25■□□□□ 0.35
PTPN13-205ENST00000502971 FCGR2BP31994 310 aaPredicted RBP17.25■□□□□ 0.35
PTPN13-205ENST00000502971 UBE2L3P68036 154 aaKnown RBP17.25■□□□□ 0.35
PTPN13-205ENST00000502971 C15orf54Q8N8G6 183 aa17.25■□□□□ 0.35
PTPN13-205ENST00000502971 SH2D7A6NKC9 451 aaPredicted RBP17.24■□□□□ 0.35
PTPN13-205ENST00000502971 LINC01548A6NM66 108 aa17.24■□□□□ 0.35
PTPN13-205ENST00000502971 OR10J4P0C629 311 aa17.24■□□□□ 0.35
PTPN13-205ENST00000502971 LYZP61626 148 aa17.24■□□□□ 0.35
PTPN13-205ENST00000502971 C11orf52Q96A22 123 aa17.24■□□□□ 0.35
PTPN13-205ENST00000502971 MAP1AP78559 2803 aaPredicted RBP17.24■□□□□ 0.35
PTPN13-205ENST00000502971 CYSRT1A8MQ03 144 aa17.24■□□□□ 0.35
PTPN13-205ENST00000502971 NDUFB4O95168 129 aa17.24■□□□□ 0.35
PTPN13-205ENST00000502971 LY6EQ16553 131 aa17.24■□□□□ 0.35
PTPN13-205ENST00000502971 Q56UQ5 140 aa17.24■□□□□ 0.35
PTPN13-205ENST00000502971 TRBV9A0A0B4J1U6 114 aa17.23■□□□□ 0.35
PTPN13-205ENST00000502971 F8W735 103 aaPredicted RBP17.23■□□□□ 0.35
PTPN13-205ENST00000502971 MRPL27Q9P0M9 148 aaKnown RBP17.23■□□□□ 0.35
PTPN13-205ENST00000502971 PRELID1Q9Y255 219 aa17.23■□□□□ 0.35
PTPN13-205ENST00000502971 CR1P17927 2039 aa17.23■□□□□ 0.35
PTPN13-205ENST00000502971 NOTCH2Q04721 2471 aa17.22■□□□□ 0.35
PTPN13-205ENST00000502971 SCO2A0A1W2PP80 73 aa17.22■□□□□ 0.35
PTPN13-205ENST00000502971 S4R3C0 116 aa17.22■□□□□ 0.35
PTPN13-205ENST00000502971 CCDC168Q8NDH2 2452 aa17.22■□□□□ 0.35
PTPN13-205ENST00000502971 TRAV41A0A0B4J266 112 aa17.21■□□□□ 0.35
PTPN13-205ENST00000502971 COLCA2A8K830 154 aa17.21■□□□□ 0.35
PTPN13-205ENST00000502971 G3V318 75 aa17.21■□□□□ 0.35
PTPN13-205ENST00000502971 PYYP10082 97 aa17.21■□□□□ 0.35
PTPN13-205ENST00000502971 PRRC2AP48634 2157 aaKnown RBP17.21■□□□□ 0.35
PTPN13-205ENST00000502971 RPL23P62829 140 aaKnown RBP17.21■□□□□ 0.35
PTPN13-205ENST00000502971 C19orf54Q5BKX5 351 aa17.21■□□□□ 0.35
PTPN13-205ENST00000502971 FXYD5Q96DB9 178 aa17.21■□□□□ 0.35
PTPN13-205ENST00000502971 TMEM242Q9NWH2 141 aa17.21■□□□□ 0.35
PTPN13-205ENST00000502971 WI2-2373I1.2A0A1W2PRP0 233 aa17.21■□□□□ 0.35
PTPN13-205ENST00000502971 CXorf65A6NEN9 183 aa17.21■□□□□ 0.35
PTPN13-205ENST00000502971 OR2C1O95371 312 aa17.21■□□□□ 0.35
PTPN13-205ENST00000502971 FSHBP01225 129 aa17.21■□□□□ 0.35
PTPN13-205ENST00000502971 ADIRFQ15847 76 aa17.21■□□□□ 0.35
PTPN13-205ENST00000502971 CYB5R2Q6BCY4 276 aa17.21■□□□□ 0.35
PTPN13-205ENST00000502971 ZNF491Q8N8L2 437 aa17.21■□□□□ 0.35
PTPN13-205ENST00000502971 NECAP1Q8NC96 275 aa17.21■□□□□ 0.35
PTPN13-205ENST00000502971 Q8WTZ3 238 aa17.21■□□□□ 0.35
PTPN13-205ENST00000502971 IGF1P05019 195 aa17.2■□□□□ 0.34
PTPN13-205ENST00000502971 RHOGP84095 191 aa17.2■□□□□ 0.34
PTPN13-205ENST00000502971 S100A7AQ86SG5 101 aa17.2■□□□□ 0.34
PTPN13-205ENST00000502971 WFDC11Q8NEX6 87 aa17.2■□□□□ 0.34
PTPN13-205ENST00000502971 SLC25A39Q9BZJ4 359 aaPredicted RBP17.2■□□□□ 0.34
PTPN13-205ENST00000502971 CTDSP1Q9GZU7 261 aa17.2■□□□□ 0.34
PTPN13-205ENST00000502971 IGHG2P01859 326 aa17.19■□□□□ 0.34
PTPN13-205ENST00000502971 DEFB112Q30KQ8 113 aa17.19■□□□□ 0.34
PTPN13-205ENST00000502971 C15orf32Q32M92 178 aa17.19■□□□□ 0.34
PTPN13-205ENST00000502971 C9orf152Q5JTZ5 239 aa17.19■□□□□ 0.34
PTPN13-205ENST00000502971 C9orf139Q6ZV77 190 aa17.19■□□□□ 0.34
PTPN13-205ENST00000502971 RNF125Q96EQ8 232 aa17.19■□□□□ 0.34
PTPN13-205ENST00000502971 DERL1Q9BUN8 251 aa17.19■□□□□ 0.34
PTPN13-205ENST00000502971 GAR1Q9NY12 217 aaKnown RBP17.19■□□□□ 0.34
PTPN13-205ENST00000502971 GGTLC3B5MD39 225 aa17.18■□□□□ 0.34
PTPN13-205ENST00000502971 BCL6BQ8N143 479 aaPredicted RBP17.18■□□□□ 0.34
PTPN13-205ENST00000502971 ZNF502Q8TBZ5 544 aa17.18■□□□□ 0.34
PTPN13-205ENST00000502971 ISOC2Q96AB3 205 aa17.18■□□□□ 0.34
PTPN13-205ENST00000502971 TMEM14CQ9P0S9 112 aa17.18■□□□□ 0.34
PTPN13-205ENST00000502971 CREBBPQ92793 2442 aa17.18■□□□□ 0.34
PTPN13-205ENST00000502971 MDFIC2A0A1B0GVS7 189 aa17.18■□□□□ 0.34
PTPN13-205ENST00000502971 IL4P05112 153 aa17.18■□□□□ 0.34
PTPN13-205ENST00000502971 SUMO1P63165 101 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms