RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 IL4P05112 153 aa18.88■□□□□ 0.61
LSM6-202ENST00000502781 FABP1P07148 127 aa18.88■□□□□ 0.61
LSM6-202ENST00000502781 RRAS2P62070 204 aaPredicted RBP18.88■□□□□ 0.61
LSM6-202ENST00000502781 FCN2Q15485 313 aa18.88■□□□□ 0.61
LSM6-202ENST00000502781 USF2Q15853 346 aaPredicted RBP18.88■□□□□ 0.61
LSM6-202ENST00000502781 LRRC37A5PQ49AS3 106 aa18.88■□□□□ 0.61
LSM6-202ENST00000502781 Q8N1Y9 231 aa18.88■□□□□ 0.61
LSM6-202ENST00000502781 OR11H7Q8NGC8 314 aa18.88■□□□□ 0.61
LSM6-202ENST00000502781 RNF2Q99496 336 aa18.88■□□□□ 0.61
LSM6-202ENST00000502781 RNF126Q9BV68 326 aa18.88■□□□□ 0.61
LSM6-202ENST00000502781 IGHV3-49A0A0A0MS15 119 aa18.87■□□□□ 0.61
LSM6-202ENST00000502781 E5RGE8 158 aa18.87■□□□□ 0.61
LSM6-202ENST00000502781 CST7O76096 145 aa18.87■□□□□ 0.61
LSM6-202ENST00000502781 MPC2O95563 127 aa18.87■□□□□ 0.61
LSM6-202ENST00000502781 SULT1A1P50225 295 aa18.87■□□□□ 0.61
LSM6-202ENST00000502781 ST8SIA2Q92186 375 aa18.87■□□□□ 0.61
LSM6-202ENST00000502781 RNF125Q96EQ8 232 aa18.87■□□□□ 0.61
LSM6-202ENST00000502781 NPVFQ9HCQ7 196 aa18.87■□□□□ 0.61
LSM6-202ENST00000502781 IGHV3OR16-13A0A075B7E8 117 aa18.86■□□□□ 0.61
LSM6-202ENST00000502781 IGHV3-74A0A0B4J1X5 117 aa18.86■□□□□ 0.61
LSM6-202ENST00000502781 TSPAN4O14817 238 aa18.86■□□□□ 0.61
LSM6-202ENST00000502781 P2RY1P47900 373 aa18.86■□□□□ 0.61
LSM6-202ENST00000502781 FAM90A2PQ658T7 463 aa18.86■□□□□ 0.61
LSM6-202ENST00000502781 LILRB2Q8N423 598 aa18.86■□□□□ 0.61
LSM6-202ENST00000502781 SMCO3A2RU48 225 aa18.85■□□□□ 0.61
LSM6-202ENST00000502781 BMI1P35226 326 aa18.85■□□□□ 0.61
LSM6-202ENST00000502781 SLC38A11Q08AI6 406 aa18.85■□□□□ 0.61
LSM6-202ENST00000502781 RBPMS2Q6ZRY4 209 aaKnown RBP18.85■□□□□ 0.61
LSM6-202ENST00000502781 A0A1W2PS18 150 aa18.84■□□□□ 0.61
LSM6-202ENST00000502781 LAMTOR1Q6IAA8 161 aa18.84■□□□□ 0.61
LSM6-202ENST00000502781 STX12Q86Y82 276 aa18.84■□□□□ 0.61
LSM6-202ENST00000502781 TMEM217Q8N7C4 229 aa18.84■□□□□ 0.61
LSM6-202ENST00000502781 SPAG8Q99932 426 aaPredicted RBP18.84■□□□□ 0.61
LSM6-202ENST00000502781 CFDP00746 253 aaPredicted RBP18.83■□□□□ 0.61
LSM6-202ENST00000502781 CD5P06127 495 aa18.83■□□□□ 0.61
LSM6-202ENST00000502781 HNRNPCP07910 306 aaKnown RBP eCLIP18.83■□□□□ 0.61
LSM6-202ENST00000502781 PET100P0DJ07 73 aa18.83■□□□□ 0.61
LSM6-202ENST00000502781 S100A11P31949 105 aa18.83■□□□□ 0.61
LSM6-202ENST00000502781 OR2F1Q13607 317 aa18.83■□□□□ 0.61
LSM6-202ENST00000502781 GUCA2BQ16661 112 aa18.83■□□□□ 0.61
LSM6-202ENST00000502781 VWC2Q2TAL6 325 aa18.83■□□□□ 0.61
LSM6-202ENST00000502781 TMEM182Q6ZP80 229 aaPredicted RBP18.83■□□□□ 0.61
LSM6-202ENST00000502781 TMEM231Q9H6L2 316 aa18.83■□□□□ 0.61
LSM6-202ENST00000502781 TEPPQ6URK8 271 aa18.82■□□□□ 0.6
LSM6-202ENST00000502781 SMAD5-AS1Q9Y6J3 95 aa18.82■□□□□ 0.6
LSM6-202ENST00000502781 IGHV3-66A0A0C4DH42 116 aa18.81■□□□□ 0.6
LSM6-202ENST00000502781 LYL1P12980 280 aa18.81■□□□□ 0.6
LSM6-202ENST00000502781 HBG1P69891 147 aa18.81■□□□□ 0.6
LSM6-202ENST00000502781 HBG2P69892 147 aa18.81■□□□□ 0.6
LSM6-202ENST00000502781 EWSR1Q01844 656 aaKnown RBP eCLIP18.81■□□□□ 0.6
LSM6-202ENST00000502781 DEFB121Q5J5C9 76 aa18.81■□□□□ 0.6
LSM6-202ENST00000502781 CYP2G1PQ6ZSU1 146 aa18.81■□□□□ 0.6
LSM6-202ENST00000502781 GTSCR1Q86UQ5 136 aa18.81■□□□□ 0.6
LSM6-202ENST00000502781 SLC25A31Q9H0C2 315 aa18.81■□□□□ 0.6
LSM6-202ENST00000502781 RABAC1Q9UI14 185 aa18.81■□□□□ 0.6
LSM6-202ENST00000502781 DFFBO76075 338 aa18.81■□□□□ 0.6
LSM6-202ENST00000502781 CD7P09564 240 aa18.81■□□□□ 0.6
LSM6-202ENST00000502781 GATA2P23769 480 aaPredicted RBP18.81■□□□□ 0.6
LSM6-202ENST00000502781 EIF2B2P49770 351 aaKnown RBP18.81■□□□□ 0.6
LSM6-202ENST00000502781 BPIFCQ8NFQ6 507 aa18.81■□□□□ 0.6
LSM6-202ENST00000502781 ASB13Q8WXK3 278 aa18.81■□□□□ 0.6
LSM6-202ENST00000502781 NARS2Q96I59 477 aaKnown RBP18.81■□□□□ 0.6
LSM6-202ENST00000502781 UQCC1Q9NVA1 299 aa18.81■□□□□ 0.6
LSM6-202ENST00000502781 MBD2Q9UBB5 411 aa18.81■□□□□ 0.6
LSM6-202ENST00000502781 BUB3O43684 328 aa18.8■□□□□ 0.6
LSM6-202ENST00000502781 LYZP61626 148 aa18.8■□□□□ 0.6
LSM6-202ENST00000502781 SELENOTP62341 195 aa18.8■□□□□ 0.6
LSM6-202ENST00000502781 NHLH2Q02577 135 aa18.8■□□□□ 0.6
LSM6-202ENST00000502781 BAXQ07812 192 aa18.8■□□□□ 0.6
LSM6-202ENST00000502781 ATP6V1FQ16864 119 aa18.8■□□□□ 0.6
LSM6-202ENST00000502781 TCF24Q7RTU0 167 aa18.8■□□□□ 0.6
LSM6-202ENST00000502781 STPG3Q8N7X2 389 aa18.8■□□□□ 0.6
LSM6-202ENST00000502781 PBDC1Q9BVG4 233 aa18.8■□□□□ 0.6
LSM6-202ENST00000502781 TMEM147Q9BVK8 224 aa18.8■□□□□ 0.6
LSM6-202ENST00000502781 GIPP09681 153 aaPredicted RBP18.79■□□□□ 0.6
LSM6-202ENST00000502781 CD81P60033 236 aa18.79■□□□□ 0.6
LSM6-202ENST00000502781 C16orf54Q6UWD8 224 aa18.79■□□□□ 0.6
LSM6-202ENST00000502781 GLMPQ8WWB7 406 aa18.79■□□□□ 0.6
LSM6-202ENST00000502781 GRAMD2BQ96HH9 432 aa18.79■□□□□ 0.6
LSM6-202ENST00000502781 NEURL2Q9BR09 285 aa18.79■□□□□ 0.6
LSM6-202ENST00000502781 C19orf73Q9NVV2 129 aa18.79■□□□□ 0.6
LSM6-202ENST00000502781 SLC45A2Q9UMX9 530 aa18.79■□□□□ 0.6
LSM6-202ENST00000502781 WDR83OSQ9Y284 106 aa18.79■□□□□ 0.6
LSM6-202ENST00000502781 A8MZ25 164 aa18.78■□□□□ 0.6
LSM6-202ENST00000502781 PLP1P60201 277 aa18.78■□□□□ 0.6
LSM6-202ENST00000502781 AGPAT2O15120 278 aa18.77■□□□□ 0.6
LSM6-202ENST00000502781 NUP62P37198 522 aaPredicted RBP18.77■□□□□ 0.6
LSM6-202ENST00000502781 MGST2Q99735 147 aa18.77■□□□□ 0.6
LSM6-202ENST00000502781 OR4C46A6NHA9 309 aa18.76■□□□□ 0.59
LSM6-202ENST00000502781 OR5C1Q8NGR4 320 aa18.76■□□□□ 0.59
LSM6-202ENST00000502781 PFDN2Q9UHV9 154 aa18.76■□□□□ 0.59
LSM6-202ENST00000502781 IGHV4-30-4P0DP06 118 aa18.75■□□□□ 0.59
LSM6-202ENST00000502781 RAP2BP61225 183 aa18.75■□□□□ 0.59
LSM6-202ENST00000502781 ZNF546Q86UE3 836 aa18.75■□□□□ 0.59
LSM6-202ENST00000502781 THAP6Q8TBB0 222 aa18.75■□□□□ 0.59
LSM6-202ENST00000502781 CHAC2Q8WUX2 184 aa18.75■□□□□ 0.59
LSM6-202ENST00000502781 TRAV2A0A0B4J234 112 aa18.74■□□□□ 0.59
LSM6-202ENST00000502781 LINC00869P0C866 280 aa18.74■□□□□ 0.59
LSM6-202ENST00000502781 C1orf194Q5T5A4 169 aa18.74■□□□□ 0.59
LSM6-202ENST00000502781 B9D2Q9BPU9 175 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms