RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 COMMD5Q9GZQ3 224 aa2.63□□□□□ -1.99
CSTF1-207ENST00000498689 NDUFA4L2Q9NRX3 87 aa2.63□□□□□ -1.99
CSTF1-207ENST00000498689 ARL8BQ9NVJ2 186 aa2.63□□□□□ -1.99
CSTF1-207ENST00000498689 MRPL16Q9NX20 251 aaKnown RBP2.63□□□□□ -1.99
CSTF1-207ENST00000498689 CMTM6Q9NX76 183 aa2.63□□□□□ -1.99
CSTF1-207ENST00000498689 BET1LQ9NYM9 111 aa2.63□□□□□ -1.99
CSTF1-207ENST00000498689 ARL2BPQ9Y2Y0 163 aa2.63□□□□□ -1.99
CSTF1-207ENST00000498689 KLF12Q9Y4X4 402 aa2.63□□□□□ -1.99
CSTF1-207ENST00000498689 IGHV3-64A0A075B6Q5 118 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 TRGV4A0A0C4DH28 118 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 OR4C45A6NMZ5 311 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 GGTLC3B5MD39 225 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 H0Y9J4 135 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 H3BN98 237 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 H7BYZ3 331 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 M0R129 80 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 BET1O15155 118 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 SPINK4O60575 86 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 ZNF780AO75290 641 aaPredicted RBP2.62□□□□□ -1.99
CSTF1-207ENST00000498689 ATG12O94817 140 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 IGKV1-17P01599 117 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 OR5AC1P0C628 307 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 RAP2AP10114 183 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 CCR6P51684 374 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 SMIM11AP58511 58 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 TAS2R43P59537 309 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 GNG11P61952 73 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 COX6A2Q02221 97 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 KLF9Q13886 244 aaPredicted RBP2.62□□□□□ -1.99
CSTF1-207ENST00000498689 PSG3Q16557 428 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 GLIPR1L1Q6UWM5 242 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 LINC00173Q6ZV60 143 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 CCDC28AQ8IWP9 274 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 LINC00337Q8N6G1 96 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 NHLRC2Q8NBF2 726 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 MUL1Q969V5 352 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 FAM162AQ96A26 154 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 ZNF479Q96JC4 524 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 RPRMQ9NS64 109 aa2.62□□□□□ -1.99
CSTF1-207ENST00000498689 TRGV11A0A075B6L2 103 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 CRTAPO75718 401 aaPredicted RBP2.61□□□□□ -1.99
CSTF1-207ENST00000498689 NXPH3O95157 252 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 HLA-DQA1P01909 254 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 CDK5Q00535 292 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 SLAQ13239 276 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 GAMTQ14353 236 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 TTC23Q5W5X9 447 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 SFXN4Q6P4A7 337 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 Q6ZQT7 251 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 RNF182Q8N6D2 247 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 FER1L6-AS1Q8NA97 138 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 OR5H2Q8NGV7 314 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 OR1P1Q8NH06 330 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 OR4S2Q8NH73 311 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 PRSS3P2Q8NHM4 247 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 GPR148Q8TDV2 347 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 LSM10Q969L4 123 aaKnown RBP2.61□□□□□ -1.99
CSTF1-207ENST00000498689 UBE2WQ96B02 151 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 SLC25A38Q96DW6 304 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 RMI2Q96E14 147 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 CPNE2Q96FN4 548 aaPredicted RBP2.61□□□□□ -1.99
CSTF1-207ENST00000498689 SH3GL1Q99961 368 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 VGLL1Q99990 258 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 AK3Q9UIJ7 227 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 KLK12Q9UKR0 248 aa2.61□□□□□ -1.99
CSTF1-207ENST00000498689 CCNB2O95067 398 aa2.6□□□□□ -1.99
CSTF1-207ENST00000498689 ANXA8P13928 327 aa2.6□□□□□ -1.99
CSTF1-207ENST00000498689 NPBWR1P48145 328 aa2.6□□□□□ -1.99
CSTF1-207ENST00000498689 TSPAN5P62079 268 aa2.6□□□□□ -1.99
CSTF1-207ENST00000498689 RHOBP62745 196 aa2.6□□□□□ -1.99
CSTF1-207ENST00000498689 CKAP4Q07065 602 aaKnown RBP2.6□□□□□ -1.99
CSTF1-207ENST00000498689 EIF4EBP1Q13541 118 aaPredicted RBP2.6□□□□□ -1.99
CSTF1-207ENST00000498689 OR2F1Q13607 317 aa2.6□□□□□ -1.99
CSTF1-207ENST00000498689 C1orf137Q5JT78 98 aa2.6□□□□□ -1.99
CSTF1-207ENST00000498689 TOR2AQ5JU69 321 aa2.6□□□□□ -1.99
CSTF1-207ENST00000498689 GFI1BQ5VTD9 330 aa2.6□□□□□ -1.99
CSTF1-207ENST00000498689 ATRAIDQ6UW56 229 aa2.6□□□□□ -1.99
CSTF1-207ENST00000498689 MOB1BQ7L9L4 216 aa2.6□□□□□ -1.99
CSTF1-207ENST00000498689 ZFP41Q8N8Y5 198 aa2.6□□□□□ -1.99
CSTF1-207ENST00000498689 DYDC1Q8WWB3 177 aa2.6□□□□□ -1.99
CSTF1-207ENST00000498689 DIRC1Q969H9 104 aa2.6□□□□□ -1.99
CSTF1-207ENST00000498689 RPL36ALQ969Q0 106 aaKnown RBP2.6□□□□□ -1.99
CSTF1-207ENST00000498689 C9orf85Q96MD7 179 aa2.6□□□□□ -1.99
CSTF1-207ENST00000498689 OPRPNQ99935 248 aaPredicted RBP2.6□□□□□ -1.99
CSTF1-207ENST00000498689 PAIP2Q9BPZ3 127 aaKnown RBP2.6□□□□□ -1.99
CSTF1-207ENST00000498689 DCSTAMPQ9H295 470 aa2.6□□□□□ -1.99
CSTF1-207ENST00000498689 RIBC2Q9H4K1 309 aa2.6□□□□□ -1.99
CSTF1-207ENST00000498689 MRPS18AQ9NVS2 196 aaKnown RBP2.6□□□□□ -1.99
CSTF1-207ENST00000498689 MRPS7Q9Y2R9 242 aaKnown RBP2.6□□□□□ -1.99
CSTF1-207ENST00000498689 RBM7Q9Y580 266 aaKnown RBP2.6□□□□□ -1.99
CSTF1-207ENST00000498689 A0A096LNI7 61 aa2.59□□□□□ -1.99
CSTF1-207ENST00000498689 TRBV6-7A0A0A0MS04 114 aa2.59□□□□□ -1.99
CSTF1-207ENST00000498689 TRBV6-6A0A0A6YYG2 114 aa2.59□□□□□ -1.99
CSTF1-207ENST00000498689 TRBV5-5A0A0J9YX44 114 aa2.59□□□□□ -1.99
CSTF1-207ENST00000498689 SPRR5A0A1B0GTR4 108 aa2.59□□□□□ -1.99
CSTF1-207ENST00000498689 J3KRW8 73 aa2.59□□□□□ -1.99
CSTF1-207ENST00000498689 TNFRSF11BO00300 401 aa2.59□□□□□ -1.99
CSTF1-207ENST00000498689 NME4O00746 187 aa2.59□□□□□ -1.99
CSTF1-207ENST00000498689 PRKYO43930 277 aa2.59□□□□□ -1.99
CSTF1-207ENST00000498689 DUSP14O95147 198 aaKnown RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms