RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 MRPL32Q9BYC8 188 aaKnown RBP13.22□□□□□ -0.29
COL6A1-206ENST00000498614 GAL3ST2Q9H3Q3 398 aa13.22□□□□□ -0.29
COL6A1-206ENST00000498614 TNFRSF19Q9NS68 423 aa13.22□□□□□ -0.29
COL6A1-206ENST00000498614 A0A1W2PN81 502 aa13.21□□□□□ -0.29
COL6A1-206ENST00000498614 PRR27Q6MZM9 219 aa13.21□□□□□ -0.29
COL6A1-206ENST00000498614 RNASEKQ6P5S7 137 aaKnown RBP13.21□□□□□ -0.29
COL6A1-206ENST00000498614 RASL11AQ6T310 242 aa13.21□□□□□ -0.29
COL6A1-206ENST00000498614 ZNF833PQ6ZTB9 187 aa13.21□□□□□ -0.29
COL6A1-206ENST00000498614 SPATA12Q7Z6I5 190 aa13.21□□□□□ -0.29
COL6A1-206ENST00000498614 ZNF329Q86UD4 541 aa13.21□□□□□ -0.29
COL6A1-206ENST00000498614 KIR3DL3Q8N743 410 aa13.21□□□□□ -0.29
COL6A1-206ENST00000498614 OR1L8Q8NGR8 309 aa13.21□□□□□ -0.29
COL6A1-206ENST00000498614 H1FXQ92522 213 aaKnown RBP13.21□□□□□ -0.29
COL6A1-206ENST00000498614 GRAMD2BQ96HH9 432 aa13.21□□□□□ -0.29
COL6A1-206ENST00000498614 ALKBH7Q9BT30 221 aaPredicted RBP13.21□□□□□ -0.29
COL6A1-206ENST00000498614 SAP30LQ9HAJ7 183 aa13.21□□□□□ -0.29
COL6A1-206ENST00000498614 TRAV9-2A0A087WT02 112 aa13.21□□□□□ -0.3
COL6A1-206ENST00000498614 IGHV2-26A0A0B4J1V2 119 aa13.21□□□□□ -0.3
COL6A1-206ENST00000498614 CORTO00230 105 aa13.21□□□□□ -0.3
COL6A1-206ENST00000498614 KLF5Q13887 457 aaPredicted RBP13.21□□□□□ -0.3
COL6A1-206ENST00000498614 TMEM30BQ3MIR4 351 aa13.21□□□□□ -0.3
COL6A1-206ENST00000498614 FAM231DQ6ZW35 169 aa13.21□□□□□ -0.3
COL6A1-206ENST00000498614 OR8B3Q8NGG8 313 aa13.21□□□□□ -0.3
COL6A1-206ENST00000498614 CCL17Q92583 94 aa13.21□□□□□ -0.3
COL6A1-206ENST00000498614 HARBI1Q96MB7 349 aa13.21□□□□□ -0.3
COL6A1-206ENST00000498614 ZNF714Q96N38 554 aa13.21□□□□□ -0.3
COL6A1-206ENST00000498614 OR8B2Q96RD0 313 aa13.21□□□□□ -0.3
COL6A1-206ENST00000498614 PEX7O00628 323 aa13.2□□□□□ -0.3
COL6A1-206ENST00000498614 IGLL1P15814 213 aa13.2□□□□□ -0.3
COL6A1-206ENST00000498614 CAMPP49913 170 aa13.2□□□□□ -0.3
COL6A1-206ENST00000498614 TMEM200BQ69YZ2 307 aa13.2□□□□□ -0.3
COL6A1-206ENST00000498614 BET1LQ9NYM9 111 aa13.2□□□□□ -0.3
COL6A1-206ENST00000498614 POLEQ07864 2286 aa13.2□□□□□ -0.3
COL6A1-206ENST00000498614 VWC2LB2RUY7 222 aa13.2□□□□□ -0.3
COL6A1-206ENST00000498614 UBE2G1P62253 170 aa13.2□□□□□ -0.3
COL6A1-206ENST00000498614 LYPD2Q6UXB3 125 aa13.2□□□□□ -0.3
COL6A1-206ENST00000498614 RNASE8Q8TDE3 154 aaKnown RBP13.2□□□□□ -0.3
COL6A1-206ENST00000498614 PPIAL4EA0A075B759 164 aa13.19□□□□□ -0.3
COL6A1-206ENST00000498614 C2orf70A6NJV1 201 aa13.19□□□□□ -0.3
COL6A1-206ENST00000498614 PPIAL4DF5H284 164 aa13.19□□□□□ -0.3
COL6A1-206ENST00000498614 H0YJW9 148 aa13.19□□□□□ -0.3
COL6A1-206ENST00000498614 APOA2P02652 100 aa13.19□□□□□ -0.3
COL6A1-206ENST00000498614 PPIAL4FP0DN26 164 aa13.19□□□□□ -0.3
COL6A1-206ENST00000498614 DIAPH2-AS1Q14236 149 aa13.19□□□□□ -0.3
COL6A1-206ENST00000498614 ZNF841Q6ZN19 808 aa13.19□□□□□ -0.3
COL6A1-206ENST00000498614 PAXXQ9BUH6 204 aa13.19□□□□□ -0.3
COL6A1-206ENST00000498614 COX11Q9Y6N1 276 aa13.19□□□□□ -0.3
COL6A1-206ENST00000498614 CFAP46Q8IYW2 2715 aa13.19□□□□□ -0.3
COL6A1-206ENST00000498614 ARFGEF3Q5TH69 2177 aa13.19□□□□□ -0.3
COL6A1-206ENST00000498614 HIGD1CA8MV81 97 aa13.18□□□□□ -0.3
COL6A1-206ENST00000498614 TMEM178BH3BS89 294 aa13.18□□□□□ -0.3
COL6A1-206ENST00000498614 COX7A2P2O60397 106 aa13.18□□□□□ -0.3
COL6A1-206ENST00000498614 IGHV3-48P01763 117 aa13.18□□□□□ -0.3
COL6A1-206ENST00000498614 GNG5P63218 68 aa13.18□□□□□ -0.3
COL6A1-206ENST00000498614 MEF2CQ06413 473 aaPredicted RBP13.18□□□□□ -0.3
COL6A1-206ENST00000498614 PATE2Q6UY27 113 aa13.18□□□□□ -0.3
COL6A1-206ENST00000498614 OR4F17Q8NGA8 305 aa13.18□□□□□ -0.3
COL6A1-206ENST00000498614 OR5B3Q8NH48 314 aa13.18□□□□□ -0.3
COL6A1-206ENST00000498614 CLEC5AQ9NY25 188 aa13.18□□□□□ -0.3
COL6A1-206ENST00000498614 E7EUB6 86 aa13.18□□□□□ -0.3
COL6A1-206ENST00000498614 OR2J3O76001 311 aa13.18□□□□□ -0.3
COL6A1-206ENST00000498614 TOMM40O96008 361 aa13.18□□□□□ -0.3
COL6A1-206ENST00000498614 ATP5IP56385 69 aaPredicted RBP13.18□□□□□ -0.3
COL6A1-206ENST00000498614 OSR1Q8TAX0 266 aaPredicted RBP13.18□□□□□ -0.3
COL6A1-206ENST00000498614 URB1-AS1Q96HZ7 61 aa13.18□□□□□ -0.3
COL6A1-206ENST00000498614 TP73-AS1Q9UF72 201 aa13.18□□□□□ -0.3
COL6A1-206ENST00000498614 PKDREJQ9NTG1 2253 aa13.18□□□□□ -0.3
COL6A1-206ENST00000498614 LEMD1Q68G75 181 aa13.17□□□□□ -0.3
COL6A1-206ENST00000498614 SGK494Q96LW2 274 aa13.17□□□□□ -0.3
COL6A1-206ENST00000498614 C7orf69Q9H7B7 122 aa13.17□□□□□ -0.3
COL6A1-206ENST00000498614 NDUFA4L2Q9NRX3 87 aa13.17□□□□□ -0.3
COL6A1-206ENST00000498614 SH2D7A6NKC9 451 aaPredicted RBP13.17□□□□□ -0.3
COL6A1-206ENST00000498614 UBE2V1Q13404 147 aa13.17□□□□□ -0.3
COL6A1-206ENST00000498614 C10orf113Q5VZT2 155 aa13.17□□□□□ -0.3
COL6A1-206ENST00000498614 OR10X1Q8NGY0 326 aa13.17□□□□□ -0.3
COL6A1-206ENST00000498614 CACNG8Q8WXS5 425 aa13.17□□□□□ -0.3
COL6A1-206ENST00000498614 IGLC7A0M8Q6 106 aa13.16□□□□□ -0.3
COL6A1-206ENST00000498614 PLAUP00749 431 aa13.16□□□□□ -0.3
COL6A1-206ENST00000498614 ZNF738Q8NE65 137 aa13.16□□□□□ -0.3
COL6A1-206ENST00000498614 FLYWCH2Q96CP2 140 aaKnown RBP13.16□□□□□ -0.3
COL6A1-206ENST00000498614 FXYD5Q96DB9 178 aa13.16□□□□□ -0.3
COL6A1-206ENST00000498614 FNDC4Q9H6D8 234 aaPredicted RBP13.16□□□□□ -0.3
COL6A1-206ENST00000498614 M0QZ24 198 aa13.16□□□□□ -0.3
COL6A1-206ENST00000498614 NDUFB3O43676 98 aa13.16□□□□□ -0.3
COL6A1-206ENST00000498614 FSTL3O95633 263 aa13.16□□□□□ -0.3
COL6A1-206ENST00000498614 OR5AN1Q8NGI8 311 aa13.16□□□□□ -0.3
COL6A1-206ENST00000498614 NPIPB3Q92617 1050 aa13.16□□□□□ -0.3
COL6A1-206ENST00000498614 ST6GALNAC6Q969X2 333 aa13.16□□□□□ -0.3
COL6A1-206ENST00000498614 CTSZQ9UBR2 303 aa13.16□□□□□ -0.3
COL6A1-206ENST00000498614 A0A1B0GXF2 115 aa13.15□□□□□ -0.3
COL6A1-206ENST00000498614 CD24P25063 80 aa13.15□□□□□ -0.3
COL6A1-206ENST00000498614 C10orf55Q5SWW7 151 aa13.15□□□□□ -0.3
COL6A1-206ENST00000498614 FAM120AOSQ5T036 256 aa13.15□□□□□ -0.3
COL6A1-206ENST00000498614 TCF24Q7RTU0 167 aa13.15□□□□□ -0.3
COL6A1-206ENST00000498614 MUC15Q8N387 334 aa13.15□□□□□ -0.3
COL6A1-206ENST00000498614 MRPL36Q9P0J6 103 aaKnown RBP13.15□□□□□ -0.3
COL6A1-206ENST00000498614 IGHV1-69-2A0A0G2JMI3 117 aa13.15□□□□□ -0.3
COL6A1-206ENST00000498614 HIST1H1EP10412 219 aaKnown RBP13.15□□□□□ -0.3
COL6A1-206ENST00000498614 RBX1P62877 108 aa13.15□□□□□ -0.3
COL6A1-206ENST00000498614 ERHP84090 104 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms