RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 STHQ8IWL8 128 aa11.81□□□□□ -0.52
NR1H3-227ENST00000498548 DCANP1Q8TF63 244 aa11.81□□□□□ -0.52
NR1H3-227ENST00000498548 DEDD2Q8WXF8 326 aa11.81□□□□□ -0.52
NR1H3-227ENST00000498548 SLC35E1Q96K37 410 aa11.81□□□□□ -0.52
NR1H3-227ENST00000498548 TMED3Q9Y3Q3 217 aa11.81□□□□□ -0.52
NR1H3-227ENST00000498548 HYDINQ4G0P3 5121 aa11.81□□□□□ -0.52
NR1H3-227ENST00000498548 C9orf170A2RU37 121 aa11.8□□□□□ -0.52
NR1H3-227ENST00000498548 CXorf65A6NEN9 183 aa11.8□□□□□ -0.52
NR1H3-227ENST00000498548 ZFP92A6NM28 416 aa11.8□□□□□ -0.52
NR1H3-227ENST00000498548 ADAP1O75689 374 aa11.8□□□□□ -0.52
NR1H3-227ENST00000498548 NDUFB6O95139 128 aa11.8□□□□□ -0.52
NR1H3-227ENST00000498548 SLC25A6P12236 298 aa11.8□□□□□ -0.52
NR1H3-227ENST00000498548 GPX4P36969 197 aaPredicted RBP11.8□□□□□ -0.52
NR1H3-227ENST00000498548 GSG1LQ6UXU4 331 aa11.8□□□□□ -0.52
NR1H3-227ENST00000498548 S100ZQ8WXG8 99 aa11.8□□□□□ -0.52
NR1H3-227ENST00000498548 RARRES2Q99969 163 aa11.8□□□□□ -0.52
NR1H3-227ENST00000498548 PBDC1Q9BVG4 233 aa11.8□□□□□ -0.52
NR1H3-227ENST00000498548 PIGBOS1A0A0B4J2F0 54 aa11.79□□□□□ -0.52
NR1H3-227ENST00000498548 NAP1L6A6NFF2 107 aa11.79□□□□□ -0.52
NR1H3-227ENST00000498548 MED6O75586 246 aa11.79□□□□□ -0.52
NR1H3-227ENST00000498548 RAB11AP62491 216 aa11.79□□□□□ -0.52
NR1H3-227ENST00000498548 OR2F1Q13607 317 aa11.79□□□□□ -0.52
NR1H3-227ENST00000498548 ZNF846Q147U1 533 aa11.79□□□□□ -0.52
NR1H3-227ENST00000498548 OR11H2Q8NH07 326 aa11.79□□□□□ -0.52
NR1H3-227ENST00000498548 ALMS1Q8TCU4 4167 aa11.79□□□□□ -0.52
NR1H3-227ENST00000498548 HELTA6NFD8 242 aa11.78□□□□□ -0.52
NR1H3-227ENST00000498548 FAM90A26D6RGX4 464 aa11.78□□□□□ -0.52
NR1H3-227ENST00000498548 DEFB4AO15263 64 aa11.78□□□□□ -0.52
NR1H3-227ENST00000498548 BUB3O43684 328 aa11.78□□□□□ -0.52
NR1H3-227ENST00000498548 SYNGR2O43760 224 aa11.78□□□□□ -0.52
NR1H3-227ENST00000498548 JTBO76095 146 aa11.78□□□□□ -0.52
NR1H3-227ENST00000498548 ANXA7P20073 488 aaKnown RBP11.78□□□□□ -0.52
NR1H3-227ENST00000498548 BTCP35070 178 aa11.78□□□□□ -0.52
NR1H3-227ENST00000498548 EIF2B2P49770 351 aaKnown RBP11.78□□□□□ -0.52
NR1H3-227ENST00000498548 ATP5IP56385 69 aaPredicted RBP11.78□□□□□ -0.52
NR1H3-227ENST00000498548 PSMG4Q5JS54 123 aa11.78□□□□□ -0.52
NR1H3-227ENST00000498548 ACTL10Q5JWF8 245 aa11.78□□□□□ -0.52
NR1H3-227ENST00000498548 SPANXN5Q5MJ07 72 aa11.78□□□□□ -0.52
NR1H3-227ENST00000498548 RNF125Q96EQ8 232 aa11.78□□□□□ -0.52
NR1H3-227ENST00000498548 H3BP45 60 aa11.77□□□□□ -0.53
NR1H3-227ENST00000498548 OR4E1P0C645 316 aa11.77□□□□□ -0.53
NR1H3-227ENST00000498548 IL7P13232 177 aa11.77□□□□□ -0.53
NR1H3-227ENST00000498548 UBE2MP61081 183 aaKnown RBP11.77□□□□□ -0.53
NR1H3-227ENST00000498548 LYZP61626 148 aa11.77□□□□□ -0.53
NR1H3-227ENST00000498548 SIGLEC15Q6ZMC9 328 aa11.77□□□□□ -0.53
NR1H3-227ENST00000498548 TRPT1Q86TN4 253 aaKnown RBP11.77□□□□□ -0.53
NR1H3-227ENST00000498548 GATAD1Q8WUU5 269 aa11.77□□□□□ -0.53
NR1H3-227ENST00000498548 RAB40CQ96S21 281 aa11.77□□□□□ -0.53
NR1H3-227ENST00000498548 WDR12Q9GZL7 423 aaKnown RBP11.77□□□□□ -0.53
NR1H3-227ENST00000498548 IGKV1OR2-108A0A075B7D4 117 aa11.76□□□□□ -0.53
NR1H3-227ENST00000498548 GIG44P09565 113 aaPredicted RBP11.76□□□□□ -0.53
NR1H3-227ENST00000498548 AP2S1P53680 142 aaPredicted RBP11.76□□□□□ -0.53
NR1H3-227ENST00000498548 POLR2GP62487 172 aaKnown RBP eCLIP11.76□□□□□ -0.53
NR1H3-227ENST00000498548 CIB3Q96Q77 187 aaPredicted RBP11.76□□□□□ -0.53
NR1H3-227ENST00000498548 CENPXA8MT69 81 aa11.75□□□□□ -0.53
NR1H3-227ENST00000498548 PRSS46E5RG02 174 aa11.75□□□□□ -0.53
NR1H3-227ENST00000498548 C4BPBP20851 252 aa11.75□□□□□ -0.53
NR1H3-227ENST00000498548 C4orf46Q504U0 113 aa11.75□□□□□ -0.53
NR1H3-227ENST00000498548 COQ8AQ8NI60 647 aa11.75□□□□□ -0.53
NR1H3-227ENST00000498548 CLEC5AQ9NY25 188 aa11.75□□□□□ -0.53
NR1H3-227ENST00000498548 SNRPGP15A8MWD9 76 aa11.74□□□□□ -0.53
NR1H3-227ENST00000498548 PLA2G10O15496 165 aa11.74□□□□□ -0.53
NR1H3-227ENST00000498548 GATA2P23769 480 aaPredicted RBP11.74□□□□□ -0.53
NR1H3-227ENST00000498548 DEFB1P60022 68 aa11.74□□□□□ -0.53
NR1H3-227ENST00000498548 NANOS2P60321 138 aaKnown RBP11.74□□□□□ -0.53
NR1H3-227ENST00000498548 RPP30P78346 268 aaKnown RBP11.74□□□□□ -0.53
NR1H3-227ENST00000498548 ID3Q02535 119 aa11.74□□□□□ -0.53
NR1H3-227ENST00000498548 CEMP1Q6PRD7 247 aaPredicted RBP11.74□□□□□ -0.53
NR1H3-227ENST00000498548 TMEM182Q6ZP80 229 aaPredicted RBP11.74□□□□□ -0.53
NR1H3-227ENST00000498548 TMEM217Q8N7C4 229 aa11.74□□□□□ -0.53
NR1H3-227ENST00000498548 THAP8Q8NA92 274 aa11.74□□□□□ -0.53
NR1H3-227ENST00000498548 TRGV9Q99603 122 aa11.74□□□□□ -0.53
NR1H3-227ENST00000498548 NRN1Q9NPD7 142 aa11.74□□□□□ -0.53
NR1H3-227ENST00000498548 STRAPQ9Y3F4 350 aaKnown RBP11.74□□□□□ -0.53
NR1H3-227ENST00000498548 CCNKO75909 580 aa11.73□□□□□ -0.53
NR1H3-227ENST00000498548 IFNA21P01568 189 aa11.73□□□□□ -0.53
NR1H3-227ENST00000498548 OR8G2PQ6IF36 304 aa11.73□□□□□ -0.53
NR1H3-227ENST00000498548 OR4D5Q8NGN0 318 aa11.73□□□□□ -0.53
NR1H3-227ENST00000498548 PPP1R14BQ96C90 147 aa11.73□□□□□ -0.53
NR1H3-227ENST00000498548 C7orf50Q9BRJ6 194 aaKnown RBP11.73□□□□□ -0.53
NR1H3-227ENST00000498548 PSENENQ9NZ42 101 aa11.73□□□□□ -0.53
NR1H3-227ENST00000498548 FBXL17Q9UF56 701 aa11.73□□□□□ -0.53
NR1H3-227ENST00000498548 NUPR2A6NF83 97 aa11.72□□□□□ -0.53
NR1H3-227ENST00000498548 SSSCA1O60232 199 aa11.72□□□□□ -0.53
NR1H3-227ENST00000498548 SCGB1D2O95969 90 aa11.72□□□□□ -0.53
NR1H3-227ENST00000498548 FABP1P07148 127 aa11.72□□□□□ -0.53
NR1H3-227ENST00000498548 SPP1P10451 314 aa11.72□□□□□ -0.53
NR1H3-227ENST00000498548 NKX2-1P43699 371 aaPredicted RBP11.72□□□□□ -0.53
NR1H3-227ENST00000498548 SNRPD3P62318 126 aaKnown RBP11.72□□□□□ -0.53
NR1H3-227ENST00000498548 MORN3Q6PF18 240 aaPredicted RBP11.72□□□□□ -0.53
NR1H3-227ENST00000498548 PHLDA1Q8WV24 401 aaPredicted RBP11.72□□□□□ -0.53
NR1H3-227ENST00000498548 LINC00052Q96N35 136 aa11.72□□□□□ -0.53
NR1H3-227ENST00000498548 SMCO3A2RU48 225 aa11.71□□□□□ -0.53
NR1H3-227ENST00000498548 LY6G6CO95867 125 aa11.71□□□□□ -0.53
NR1H3-227ENST00000498548 ATF4P18848 351 aaPredicted RBP11.71□□□□□ -0.53
NR1H3-227ENST00000498548 PAX9P55771 341 aa11.71□□□□□ -0.53
NR1H3-227ENST00000498548 AKR1C1Q04828 323 aa11.71□□□□□ -0.53
NR1H3-227ENST00000498548 GDF5OSQ5U4N7 250 aa11.71□□□□□ -0.53
NR1H3-227ENST00000498548 ACOT7LQ6ZUV0 252 aa11.71□□□□□ -0.53
NR1H3-227ENST00000498548 C11orf45Q8TAV5 145 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms