RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 OR11H1Q8NG94 326 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 ABHD3Q8WU67 409 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 TFGQ92734 400 aaPredicted RBP1.06□□□□□ -2.24
XRN1-214ENST00000498077 C20orf27Q9GZN8 174 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 TMEM126AQ9H061 195 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 MIXL1Q9H2W2 232 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 ZDHHC6Q9H6R6 413 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 TBC1D29Q9UFV1 150 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 SCP2D1Q9UJQ7 156 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 V9GYY9 64 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 F8WEM9 126 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 CCSO14618 274 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 M6PRP20645 277 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 LOXP28300 417 aaPredicted RBP1.06□□□□□ -2.24
XRN1-214ENST00000498077 CRISP3P54108 245 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 CMC4P56277 68 aaPredicted RBP1.06□□□□□ -2.24
XRN1-214ENST00000498077 SYNJ2BPP57105 145 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 OR2F1Q13607 317 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 LPAL2Q16609 132 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 TSPAN14Q8NG11 270 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 IGFBPL1Q8WX77 278 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 BORCS8Q96FH0 119 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 OR52E6Q96RD3 313 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 COQ7Q99807 217 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 NDUFB11Q9NX14 153 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 NUBP2Q9Y5Y2 271 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 V9GYV3 84 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 ANK2Q01484 3957 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 VWFP04275 2813 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 CHD3Q12873 2000 aaKnown RBP1.06□□□□□ -2.24
XRN1-214ENST00000498077 CSMD3Q7Z407 3707 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 DOCK8Q8NF50 2099 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 TRAV9-1A0A075B6T8 112 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 OR11H12B2RN74 326 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 GATA1P15976 413 aaPredicted RBP1.06□□□□□ -2.24
XRN1-214ENST00000498077 RPL5P46777 297 aaKnown RBP1.06□□□□□ -2.24
XRN1-214ENST00000498077 PIGPP57054 158 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 ERVK-16P61578 105 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 CDK6Q00534 326 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 MS4A13Q5J8X5 152 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 LDLRAD2Q5SZI1 272 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 C9orf135Q5VTT2 229 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 RESP18Q5W5W9 173 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 GJB7Q6PEY0 223 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 ZNF613Q6PF04 617 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 CMC1Q7Z7K0 106 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 OR11L1Q8NGX0 322 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 OR2T27Q8NH04 317 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 OR11H2Q8NH07 326 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 C18orf15Q96N68 181 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 NIPSNAP1Q9BPW8 284 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 PRSS27Q9BQR3 290 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 SNRNP25Q9BV90 132 aaKnown RBP1.06□□□□□ -2.24
XRN1-214ENST00000498077 SAMD10Q9BYL1 202 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 VCX2Q9H322 139 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 WDR76Q9H967 626 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 FAM60AQ9NP50 221 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 PNRC2Q9NPJ4 139 aaKnown RBP1.06□□□□□ -2.24
XRN1-214ENST00000498077 GPR173Q9NS66 373 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 NFU1Q9UMS0 254 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 ZFP30Q9Y2G7 519 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 FIS1Q9Y3D6 152 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 PTPRJQ12913 1337 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 LYSTQ99698 3801 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 HEATR5BQ9P2D3 2071 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 FAM240AA0A1B0GVK7 77 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 C17orf102A2RUQ5 167 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 LINC01548A6NM66 108 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 TMEM262E9PQX1 116 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 G3V2L1 256 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 JMJD7-PLA2G4BH0Y9G9 81 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 H3BNG1 76 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 FFAR1O14842 300 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 LDLRAD4O15165 306 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 S100A6P06703 90 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 APELAP0DMC3 54 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 GATA2P23769 480 aaPredicted RBP1.05□□□□□ -2.24
XRN1-214ENST00000498077 BLVRBP30043 206 aaPredicted RBP1.05□□□□□ -2.24
XRN1-214ENST00000498077 OR1E1P30953 314 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 RABIFP47224 123 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 FOXL2P58012 376 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 TBPL1P62380 186 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 CDK16Q00536 496 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 CLEC19AQ6UXS0 136 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 OR8J2Q8NGG1 315 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 ZNF418Q8TF45 676 aaPredicted RBP1.05□□□□□ -2.24
XRN1-214ENST00000498077 TSGA13Q96PP4 275 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 NKX6-2Q9C056 277 aaPredicted RBP1.05□□□□□ -2.24
XRN1-214ENST00000498077 NAA60Q9H7X0 242 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 DBNDD1Q9H9R9 158 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 TAS2R4Q9NYW5 299 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 SS18L2Q9UHA2 77 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 LAMTOR3Q9UHA4 124 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 HEY1Q9Y5J3 304 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 PLRG1O43660 514 aaKnown RBP1.05□□□□□ -2.24
XRN1-214ENST00000498077 RAD1O60671 282 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 WNT2P09544 360 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 S100A10P60903 97 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 ST8SIA6P61647 398 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 IL10RBQ08334 325 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms