RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 F8W735 103 aaPredicted RBP13.93□□□□□ -0.18
CHRNA4-206ENST00000498043 HIST1H1BP16401 226 aaKnown RBP13.93□□□□□ -0.18
CHRNA4-206ENST00000498043 BLCAPP62952 87 aa13.93□□□□□ -0.18
CHRNA4-206ENST00000498043 RHOGP84095 191 aa13.93□□□□□ -0.18
CHRNA4-206ENST00000498043 OR5AU1Q8NGC0 362 aa13.93□□□□□ -0.18
CHRNA4-206ENST00000498043 ELOA3CA0A087WX78 387 aaPredicted RBP13.92□□□□□ -0.18
CHRNA4-206ENST00000498043 M0R036 132 aa13.92□□□□□ -0.18
CHRNA4-206ENST00000498043 C15orf32Q32M92 178 aa13.92□□□□□ -0.18
CHRNA4-206ENST00000498043 AWAT1Q58HT5 328 aa13.92□□□□□ -0.18
CHRNA4-206ENST00000498043 PQLC2Q6ZP29 291 aa13.92□□□□□ -0.18
CHRNA4-206ENST00000498043 FAM167A-AS1Q96KT0 104 aa13.92□□□□□ -0.18
CHRNA4-206ENST00000498043 TMEM68Q96MH6 324 aa13.92□□□□□ -0.18
CHRNA4-206ENST00000498043 YTHDF2Q9Y5A9 579 aaKnown RBP13.92□□□□□ -0.18
CHRNA4-206ENST00000498043 FLNAP21333 2647 aaKnown RBP13.92□□□□□ -0.18
CHRNA4-206ENST00000498043 HYPMO75409 117 aa13.92□□□□□ -0.18
CHRNA4-206ENST00000498043 RD3LP0DJH9 198 aa13.92□□□□□ -0.18
CHRNA4-206ENST00000498043 IER3P46695 156 aa13.92□□□□□ -0.18
CHRNA4-206ENST00000498043 Q6ZS46 218 aa13.92□□□□□ -0.18
CHRNA4-206ENST00000498043 C16orf82Q7Z2V1 217 aa13.92□□□□□ -0.18
CHRNA4-206ENST00000498043 MS4A10Q96PG2 267 aa13.92□□□□□ -0.18
CHRNA4-206ENST00000498043 FOXC2Q99958 501 aa13.92□□□□□ -0.18
CHRNA4-206ENST00000498043 HECTD1Q9ULT8 2610 aa13.92□□□□□ -0.18
CHRNA4-206ENST00000498043 MXRA5Q9NR99 2828 aa13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 OR2T8A6NH00 312 aa13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 FAM74A7A6NL05 159 aa13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 H3BQ15 152 aa13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 NUPL2O15504 423 aaKnown RBP13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 FABP1P07148 127 aa13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 FAM74A3Q4VXF1 159 aa13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 C19orf54Q5BKX5 351 aa13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 C9orf139Q6ZV77 190 aa13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 IL17RELQ6ZVW7 336 aa13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 RPUSD4Q96CM3 377 aaKnown RBP13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 ZNF48Q96MX3 618 aaPredicted RBP13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 IGHG2P01859 326 aa13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 PYYP10082 97 aa13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 AKR1C3P42330 323 aa13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 CRIP2P52943 208 aaPredicted RBP13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 UBE2L3P68036 154 aaKnown RBP13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 ZNF674Q2M3X9 581 aa13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 TMEM88Q6PEY1 159 aa13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 OR51G1Q8NGK1 321 aa13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 NOL4LQ96MY1 436 aaPredicted RBP13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 NIPSNAP3BQ9BS92 247 aa13.91□□□□□ -0.18
CHRNA4-206ENST00000498043 TRBV9A0A0B4J1U6 114 aa13.9□□□□□ -0.18
CHRNA4-206ENST00000498043 TMEM250H0YL14 139 aa13.9□□□□□ -0.18
CHRNA4-206ENST00000498043 TOMM40O96008 361 aa13.9□□□□□ -0.18
CHRNA4-206ENST00000498043 PLP1P60201 277 aa13.9□□□□□ -0.18
CHRNA4-206ENST00000498043 TMEM167BQ9NRX6 74 aa13.9□□□□□ -0.18
CHRNA4-206ENST00000498043 HIGD1AQ9Y241 93 aa13.9□□□□□ -0.18
CHRNA4-206ENST00000498043 AKAP9Q99996 3911 aa13.9□□□□□ -0.18
CHRNA4-206ENST00000498043 TRAV30A0A087WSZ9 112 aa13.89□□□□□ -0.19
CHRNA4-206ENST00000498043 IGF1P05019 195 aa13.89□□□□□ -0.19
CHRNA4-206ENST00000498043 LEMD1Q68G75 181 aa13.89□□□□□ -0.19
CHRNA4-206ENST00000498043 CBLN2Q8IUK8 224 aa13.89□□□□□ -0.19
CHRNA4-206ENST00000498043 VN1R17PQ8TDU5 208 aa13.89□□□□□ -0.19
CHRNA4-206ENST00000498043 IL4P05112 153 aa13.89□□□□□ -0.19
CHRNA4-206ENST00000498043 NECAP1Q8NC96 275 aa13.89□□□□□ -0.19
CHRNA4-206ENST00000498043 ZNF727A8MUV8 499 aa13.88□□□□□ -0.19
CHRNA4-206ENST00000498043 DNASE2O00115 360 aaPredicted RBP13.88□□□□□ -0.19
CHRNA4-206ENST00000498043 PDE6DO43924 150 aa13.88□□□□□ -0.19
CHRNA4-206ENST00000498043 GPR183P32249 361 aa13.88□□□□□ -0.19
CHRNA4-206ENST00000498043 KLK9Q2XQG4 91 aa13.88□□□□□ -0.19
CHRNA4-206ENST00000498043 Q6YL49 198 aa13.88□□□□□ -0.19
CHRNA4-206ENST00000498043 OR5R1Q8NH85 324 aa13.88□□□□□ -0.19
CHRNA4-206ENST00000498043 ZNF502Q8TBZ5 544 aa13.88□□□□□ -0.19
CHRNA4-206ENST00000498043 SMIM7Q9BQ49 75 aa13.88□□□□□ -0.19
CHRNA4-206ENST00000498043 PAXXQ9BUH6 204 aa13.88□□□□□ -0.19
CHRNA4-206ENST00000498043 PARLQ9H300 379 aa13.88□□□□□ -0.19
CHRNA4-206ENST00000498043 RPS10P5Q9NQ39 176 aa13.88□□□□□ -0.19
CHRNA4-206ENST00000498043 KLK9Q9UKQ9 250 aa13.88□□□□□ -0.19
CHRNA4-206ENST00000498043 SNRPCP09234 159 aaKnown RBP13.87□□□□□ -0.19
CHRNA4-206ENST00000498043 YPEL3P61236 119 aaPredicted RBP13.87□□□□□ -0.19
CHRNA4-206ENST00000498043 RNF125Q96EQ8 232 aa13.87□□□□□ -0.19
CHRNA4-206ENST00000498043 VPREB3Q9UKI3 123 aa13.87□□□□□ -0.19
CHRNA4-206ENST00000498043 NPPCP23582 126 aa13.87□□□□□ -0.19
CHRNA4-206ENST00000498043 TMEM95Q3KNT9 176 aa13.87□□□□□ -0.19
CHRNA4-206ENST00000498043 ZNF491Q8N8L2 437 aa13.87□□□□□ -0.19
CHRNA4-206ENST00000498043 CCDC140Q96MF4 163 aa13.87□□□□□ -0.19
CHRNA4-206ENST00000498043 CHRDL1Q9BU40 450 aa13.87□□□□□ -0.19
CHRNA4-206ENST00000498043 OR51M1Q9H341 326 aa13.87□□□□□ -0.19
CHRNA4-206ENST00000498043 FASNP49327 2511 aaKnown RBP13.86□□□□□ -0.19
CHRNA4-206ENST00000498043 SCO2A0A1W2PP80 73 aa13.86□□□□□ -0.19
CHRNA4-206ENST00000498043 C7orf77A4D0Y5 90 aa13.86□□□□□ -0.19
CHRNA4-206ENST00000498043 HOXA3O43365 443 aaPredicted RBP13.86□□□□□ -0.19
CHRNA4-206ENST00000498043 CTSGP08311 255 aa13.86□□□□□ -0.19
CHRNA4-206ENST00000498043 TVP23CQ96ET8 276 aa13.86□□□□□ -0.19
CHRNA4-206ENST00000498043 TXN2Q99757 166 aa13.86□□□□□ -0.19
CHRNA4-206ENST00000498043 DERL1Q9BUN8 251 aa13.86□□□□□ -0.19
CHRNA4-206ENST00000498043 SLC25A39Q9BZJ4 359 aaPredicted RBP13.86□□□□□ -0.19
CHRNA4-206ENST00000498043 TMA7Q9Y2S6 64 aaKnown RBP13.86□□□□□ -0.19
CHRNA4-206ENST00000498043 F6UZH7 168 aa13.86□□□□□ -0.19
CHRNA4-206ENST00000498043 AP4M1O00189 453 aa13.86□□□□□ -0.19
CHRNA4-206ENST00000498043 SCGB2A1O75556 95 aa13.86□□□□□ -0.19
CHRNA4-206ENST00000498043 TRGV3P03979 118 aa13.86□□□□□ -0.19
CHRNA4-206ENST00000498043 FCGR2BP31994 310 aaPredicted RBP13.86□□□□□ -0.19
CHRNA4-206ENST00000498043 ADMP35318 185 aa13.86□□□□□ -0.19
CHRNA4-206ENST00000498043 USF2Q15853 346 aaPredicted RBP13.86□□□□□ -0.19
CHRNA4-206ENST00000498043 FXYD5Q96DB9 178 aa13.86□□□□□ -0.19
CHRNA4-206ENST00000498043 TXNDC17Q9BRA2 123 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms