RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 VEGFCP49767 419 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 NDUFV3P56181 108 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 RUNX1Q01196 453 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 RPL18AQ02543 176 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 EIF4EBP1Q13541 118 aaPredicted RBP4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 ABCA11PQ4W5N1 156 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 SMUG1Q53HV7 270 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 UFSP1Q6NVU6 142 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 CNIH2Q6PI25 160 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 STPG2Q8N412 459 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 TCTEX1D1Q8N7M0 179 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 OR4X2Q8NGF9 303 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 TMEM230Q96A57 120 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 KCTD7Q96MP8 289 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 CMSS1Q9BQ75 279 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 HDHD3Q9BSH5 251 aaPredicted RBP4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 MRPL20Q9BYC9 149 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 PARP12Q9H0J9 701 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 ZNF107Q9UII5 783 aaPredicted RBP4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 SSR3Q9UNL2 185 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 OR51B2Q9Y5P1 312 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 IGHV7-81A0A0B4J1V7 117 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 H0Y980 276 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 FABP7O15540 132 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 GABARAPO95166 117 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 IGHV3-7P01780 117 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 IGKV2-30P06310 120 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 SCTP09683 121 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 OR5H8P0DN80 308 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 CD28P10747 220 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 CD36P16671 472 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 ZP3P21754 424 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 VDAC1P21796 283 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 CD24P25063 80 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 HRH1P35367 487 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 EGFEM1PQ0D2K5 195 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 GCSAMLQ5JQS6 135 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 OR10J3Q5JRS4 329 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 HES5Q5TA89 166 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 HACD4Q5VWC8 232 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 SLC35E3Q7Z769 313 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 PDPNQ86YL7 162 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 H1FOOQ8IZA3 346 aaPredicted RBP4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 LYG1Q8N1E2 194 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 OR6Q1Q8NGQ2 317 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 P2RX4Q99571 388 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 NXF2Q9GZY0 626 aaKnown RBP4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 BATF3Q9NR55 127 aa4.41□□□□□ -1.7
TMEM39A-212ENST00000497993 A0A0G2JLM5 398 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 RBMY1BA6NDE4 496 aaKnown RBP4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 RBMY1EA6NEQ0 496 aaKnown RBP4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 MPTX1A8MV57 137 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 ZNF736B4DX44 427 aaPredicted RBP4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 SLC22A5O76082 557 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 RBMY1DP0C7P1 496 aaKnown RBP4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 RBMY1A1P0DJD3 496 aaKnown RBP4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 REG1BP48304 166 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 THBS3P49746 956 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 CAV2P51636 162 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 POLR2GP62487 172 aaKnown RBP eCLIP4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 NDPQ00604 133 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 CD164Q04900 197 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 MMDQ15546 238 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 LTC4SQ16873 150 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 MRGPRG-AS1Q2M3A8 158 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 KLK9Q2XQG4 91 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 ACTBL2Q562R1 376 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 ZNF660Q6AZW8 331 aaPredicted RBP4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 FAM19A1Q7Z5A9 133 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 MRPL55Q7Z7F7 128 aaKnown RBP4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 Q8N9P0 234 aaPredicted RBP4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 OR5H6Q8NGV6 325 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 C11orf45Q8TAV5 145 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 UBALD1Q8TB05 177 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 PTH2Q96A98 100 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 SLC25A46Q96AG3 418 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 HSPB9Q9BQS6 159 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 KLK9Q9UKQ9 250 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 ZNF256Q9Y2P7 627 aaPredicted RBP4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 WASHC3Q9Y3C0 194 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 DNAH9Q9NYC9 4486 aa4.4□□□□□ -1.71
TMEM39A-212ENST00000497993 TENM3Q9P273 2699 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 IGHV3-72A0A0B4J1Y9 119 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 NCBP2LA6PVI3 153 aaKnown RBP4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 H3BUA1 57 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 SSNA1O43805 119 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 IGLV2-23P01705 113 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 HLA-DQB1P01920 261 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 GNB3P16520 340 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 MYCNOSP40205 109 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 LGALS7P47929 136 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 AP2S1P53680 142 aaPredicted RBP4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 TAS2R31P59538 309 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 SELENOTP62341 195 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 HES1Q14469 280 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 NEDD8Q15843 81 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 RPL39P5Q59GN2 51 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 C10orf99Q6UWK7 81 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 FAM131AQ6UXB0 335 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 AKAP14Q86UN6 197 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms