RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 SP9P0CG40 484 aa10.63□□□□□ -0.71
GAPVD1-220ENST00000497580 FCGR2BP31994 310 aaPredicted RBP10.63□□□□□ -0.71
GAPVD1-220ENST00000497580 PCP2Q8IVA1 136 aa10.63□□□□□ -0.71
GAPVD1-220ENST00000497580 WDR31Q8NA23 367 aa10.63□□□□□ -0.71
GAPVD1-220ENST00000497580 CACNA1BQ00975 2339 aa10.63□□□□□ -0.71
GAPVD1-220ENST00000497580 SERTM2A0A1B0GWG4 89 aa10.63□□□□□ -0.71
GAPVD1-220ENST00000497580 SSBP2P81877 361 aaPredicted RBP10.63□□□□□ -0.71
GAPVD1-220ENST00000497580 IMMP1LQ96LU5 166 aa10.63□□□□□ -0.71
GAPVD1-220ENST00000497580 SLC25A2Q9BXI2 301 aa10.63□□□□□ -0.71
GAPVD1-220ENST00000497580 SP1P08047 785 aa10.62□□□□□ -0.71
GAPVD1-220ENST00000497580 CYB561P49447 251 aa10.62□□□□□ -0.71
GAPVD1-220ENST00000497580 TBC1D28Q2M2D7 210 aa10.62□□□□□ -0.71
GAPVD1-220ENST00000497580 TIMM23BQ5SRD1 257 aa10.62□□□□□ -0.71
GAPVD1-220ENST00000497580 ZNF329Q86UD4 541 aa10.62□□□□□ -0.71
GAPVD1-220ENST00000497580 INTS1Q8N201 2190 aaKnown RBP10.62□□□□□ -0.71
GAPVD1-220ENST00000497580 IGHV3OR15-7A0A075B7D8 119 aa10.62□□□□□ -0.71
GAPVD1-220ENST00000497580 GAGE12HA6NDE8 117 aa10.62□□□□□ -0.71
GAPVD1-220ENST00000497580 MOSP00540 346 aa10.62□□□□□ -0.71
GAPVD1-220ENST00000497580 COL8A1P27658 744 aa10.62□□□□□ -0.71
GAPVD1-220ENST00000497580 ZNF134P52741 427 aa10.62□□□□□ -0.71
GAPVD1-220ENST00000497580 MRPL14Q6P1L8 145 aaKnown RBP10.62□□□□□ -0.71
GAPVD1-220ENST00000497580 OR5A1Q8NGJ0 315 aa10.62□□□□□ -0.71
GAPVD1-220ENST00000497580 TTTY13Q9BZ97 58 aa10.62□□□□□ -0.71
GAPVD1-220ENST00000497580 TNRC18O15417 2968 aaPredicted RBP10.62□□□□□ -0.71
GAPVD1-220ENST00000497580 NAV3Q8IVL0 2385 aa10.62□□□□□ -0.71
GAPVD1-220ENST00000497580 PLXNB1O43157 2135 aa10.62□□□□□ -0.71
GAPVD1-220ENST00000497580 TRAV8-1A0A0A6YYK1 113 aa10.62□□□□□ -0.71
GAPVD1-220ENST00000497580 CSN1S1P47710 185 aa10.62□□□□□ -0.71
GAPVD1-220ENST00000497580 RBMXL3Q8N7X1 1067 aaKnown RBP10.62□□□□□ -0.71
GAPVD1-220ENST00000497580 A0A1B0GXF2 115 aa10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 FAM106CPP0CH98 169 aa10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 FAM106AQ4KMX7 169 aa10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 LINC01545Q5VT33 79 aa10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 C10orf113Q5VZT2 155 aa10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 SH2D6Q7Z4S9 175 aa10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 PDPNQ86YL7 162 aa10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 DEFB127Q9H1M4 99 aa10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 C1RLQ9NZP8 487 aa10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 CFAP47Q6ZTR5 3102 aa10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 C9orf172C9J069 976 aa10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 K7EQM0 130 aa10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 MAGEA5P43359 124 aa10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 REG1BP48304 166 aa10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 RNFT1Q5M7Z0 435 aa10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 ATP5L2Q7Z4Y8 100 aa10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 NEU4Q8WWR8 484 aaPredicted RBP10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 KLF7O75840 302 aaPredicted RBP10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 MPV17P39210 176 aa10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 FAM231DQ6ZW35 169 aa10.61□□□□□ -0.71
GAPVD1-220ENST00000497580 PSMB11A5LHX3 300 aa10.6□□□□□ -0.71
GAPVD1-220ENST00000497580 ETDBQ3ZM63 59 aa10.6□□□□□ -0.71
GAPVD1-220ENST00000497580 C1orf229Q6ZS94 237 aaPredicted RBP10.6□□□□□ -0.71
GAPVD1-220ENST00000497580 RND1Q92730 232 aa10.6□□□□□ -0.71
GAPVD1-220ENST00000497580 TANC2Q9HCD6 1990 aa10.6□□□□□ -0.71
GAPVD1-220ENST00000497580 PCNX2A6NKB5 2137 aa10.6□□□□□ -0.71
GAPVD1-220ENST00000497580 WFDC2Q14508 124 aa10.6□□□□□ -0.71
GAPVD1-220ENST00000497580 FAM173AQ9BQD7 235 aa10.6□□□□□ -0.71
GAPVD1-220ENST00000497580 ZNF747Q9BV97 191 aa10.6□□□□□ -0.71
GAPVD1-220ENST00000497580 LAMA5O15230 3695 aa10.6□□□□□ -0.71
GAPVD1-220ENST00000497580 IGHV3-21A0A0B4J1V1 117 aa10.6□□□□□ -0.71
GAPVD1-220ENST00000497580 TIMM8AO60220 97 aaPredicted RBP10.6□□□□□ -0.71
GAPVD1-220ENST00000497580 FAM87AP0C7U9 286 aa10.6□□□□□ -0.71
GAPVD1-220ENST00000497580 CRYBA4P53673 196 aa10.6□□□□□ -0.71
GAPVD1-220ENST00000497580 LOXL1Q08397 574 aaPredicted RBP10.6□□□□□ -0.71
GAPVD1-220ENST00000497580 FAM167A-AS1Q96KT0 104 aa10.6□□□□□ -0.71
GAPVD1-220ENST00000497580 NCKAP5O14513 1909 aa10.6□□□□□ -0.71
GAPVD1-220ENST00000497580 TMEM238LA0A1B0GVL6 79 aa10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 SMAD7O15105 426 aaKnown RBP10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 SMIM13P0DJ93 91 aa10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 APOBEC3AP31941 199 aaPredicted RBP10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 ATP5G2Q06055 141 aa10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 RBPMS2Q6ZRY4 209 aaKnown RBP10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 CIARTQ8N365 385 aaPredicted RBP10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 ZADH2Q8N4Q0 377 aa10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 ZNRF1Q8ND25 227 aa10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 MAFAQ8NHW3 353 aaPredicted RBP10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 NHP2Q9NX24 153 aaKnown RBP10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 ATMQ13315 3056 aa10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 SPTBN1Q01082 2364 aaKnown RBP10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 TRGV8A0A0C4DH27 118 aa10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 SS18L1O75177 396 aaPredicted RBP10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 STXBP6Q8NFX7 210 aa10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 NPIPB3Q92617 1050 aa10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 ARPC1AQ92747 370 aa10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 C18orf15Q96N68 181 aa10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 DUSP23Q9BVJ7 150 aa10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 ZNRD1Q9P1U0 126 aa10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 MGST3O14880 152 aa10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 FTH1P19P0C7X4 201 aa10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 AMTNQ6UX39 209 aa10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 GPR82Q96P67 336 aa10.59□□□□□ -0.71
GAPVD1-220ENST00000497580 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 hADV38S2A0JD32 116 aa10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 J3QR89 54 aa10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 LYZL6O75951 148 aa10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 AGFG2O95081 481 aa10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 APELAP0DMC3 54 aa10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 FCER1GP30273 86 aa10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 IFI27P40305 119 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms