RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, human

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPN1-208	ENST00000497415	TP53TG1	Q9Y2A0	90 aa		13.8	□□□□□ -0.2
RPN1-208	ENST00000497415	ZFP92	A6NM28	416 aa		13.79	□□□□□ -0.2
RPN1-208	ENST00000497415		K7EQG2	157 aa		13.79	□□□□□ -0.2
RPN1-208	ENST00000497415	NKX2-1	P43699	371 aa	Predicted RBP	13.79	□□□□□ -0.2
RPN1-208	ENST00000497415	POLR2G	P62487	172 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
RPN1-208	ENST00000497415	FAM24B	Q8N5W8	94 aa		13.79	□□□□□ -0.2
RPN1-208	ENST00000497415	STPG3	Q8N7X2	389 aa		13.79	□□□□□ -0.2
RPN1-208	ENST00000497415	THAP8	Q8NA92	274 aa		13.79	□□□□□ -0.2
RPN1-208	ENST00000497415	TRGV9	Q99603	122 aa		13.79	□□□□□ -0.2
RPN1-208	ENST00000497415	PAIP2B	Q9ULR5	123 aa	Known RBP	13.79	□□□□□ -0.2
RPN1-208	ENST00000497415	HELT	A6NFD8	242 aa		13.78	□□□□□ -0.2
RPN1-208	ENST00000497415	BUB3	O43684	328 aa		13.78	□□□□□ -0.2
RPN1-208	ENST00000497415	RPL35A	P18077	110 aa	Known RBP	13.78	□□□□□ -0.2
RPN1-208	ENST00000497415	ZNF90	Q03938	601 aa		13.78	□□□□□ -0.2
RPN1-208	ENST00000497415	SPANXN5	Q5MJ07	72 aa		13.78	□□□□□ -0.2
RPN1-208	ENST00000497415	STXBP6	Q8NFX7	210 aa		13.78	□□□□□ -0.2
RPN1-208	ENST00000497415	DCANP1	Q8TF63	244 aa		13.78	□□□□□ -0.2
RPN1-208	ENST00000497415	RNF125	Q96EQ8	232 aa		13.78	□□□□□ -0.2
RPN1-208	ENST00000497415	RABAC1	Q9UI14	185 aa		13.78	□□□□□ -0.2
RPN1-208	ENST00000497415	STRAP	Q9Y3F4	350 aa	Known RBP	13.78	□□□□□ -0.2
RPN1-208	ENST00000497415	CSMD3	Q7Z407	3707 aa		13.77	□□□□□ -0.2
RPN1-208	ENST00000497415	IGKV1OR2-108	A0A075B7D4	117 aa		13.77	□□□□□ -0.21
RPN1-208	ENST00000497415	EIF2B2	P49770	351 aa	Known RBP	13.77	□□□□□ -0.21
RPN1-208	ENST00000497415	AP2S1	P53680	142 aa	Predicted RBP	13.77	□□□□□ -0.21
RPN1-208	ENST00000497415	DEFB131A	P59861	70 aa		13.77	□□□□□ -0.21
RPN1-208	ENST00000497415	OR8G2P	Q6IF36	304 aa		13.77	□□□□□ -0.21
RPN1-208	ENST00000497415	TRAV6	A0A075B6T7	132 aa		13.76	□□□□□ -0.21
RPN1-208	ENST00000497415		H3BP45	60 aa		13.76	□□□□□ -0.21
RPN1-208	ENST00000497415	SPRY2	O43597	315 aa		13.76	□□□□□ -0.21
RPN1-208	ENST00000497415	FABP1	P07148	127 aa		13.76	□□□□□ -0.21
RPN1-208	ENST00000497415	IAH1	Q2TAA2	248 aa	Predicted RBP	13.76	□□□□□ -0.21
RPN1-208	ENST00000497415	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.76	□□□□□ -0.21
RPN1-208	ENST00000497415	RNF183	Q96D59	192 aa		13.76	□□□□□ -0.21
RPN1-208	ENST00000497415	SMIM8	Q96KF7	97 aa		13.76	□□□□□ -0.21
RPN1-208	ENST00000497415	NUDT15	Q9NV35	164 aa		13.76	□□□□□ -0.21
RPN1-208	ENST00000497415	PSENEN	Q9NZ42	101 aa		13.76	□□□□□ -0.21
RPN1-208	ENST00000497415	TBC1D24	Q9ULP9	559 aa		13.76	□□□□□ -0.21
RPN1-208	ENST00000497415	PMS2P5	A8MQ11	134 aa		13.75	□□□□□ -0.21
RPN1-208	ENST00000497415	PAX9	P55771	341 aa		13.75	□□□□□ -0.21
RPN1-208	ENST00000497415	DEFB135	Q30KP9	77 aa		13.75	□□□□□ -0.21
RPN1-208	ENST00000497415	CSTL1	Q9H114	145 aa		13.75	□□□□□ -0.21
RPN1-208	ENST00000497415	PTTG2	Q9NZH5	202 aa		13.75	□□□□□ -0.21
RPN1-208	ENST00000497415	SNRPGP15	A8MWD9	76 aa		13.74	□□□□□ -0.21
RPN1-208	ENST00000497415	SSSCA1	O60232	199 aa		13.74	□□□□□ -0.21
RPN1-208	ENST00000497415	H2AFB2	P0C5Z0	115 aa		13.74	□□□□□ -0.21
RPN1-208	ENST00000497415	NUP62	P37198	522 aa	Predicted RBP	13.74	□□□□□ -0.21
RPN1-208	ENST00000497415	ASAH1	Q13510	395 aa		13.74	□□□□□ -0.21
RPN1-208	ENST00000497415	LEMD1	Q68G75	181 aa		13.74	□□□□□ -0.21
RPN1-208	ENST00000497415	ZFAND6	Q6FIF0	208 aa		13.74	□□□□□ -0.21
RPN1-208	ENST00000497415	IL17D	Q8TAD2	202 aa		13.74	□□□□□ -0.21
RPN1-208	ENST00000497415	ZNF431	Q8TF32	576 aa	Predicted RBP	13.74	□□□□□ -0.21
RPN1-208	ENST00000497415	PBDC1	Q9BVG4	233 aa		13.74	□□□□□ -0.21
RPN1-208	ENST00000497415	STARD9	Q9P2P6	4700 aa		13.74	□□□□□ -0.21
RPN1-208	ENST00000497415	FAM240B	A0A1B0GVZ2	78 aa		13.73	□□□□□ -0.21
RPN1-208	ENST00000497415	CFD	P00746	253 aa	Predicted RBP	13.73	□□□□□ -0.21
RPN1-208	ENST00000497415	TAS2R30	P59541	319 aa		13.73	□□□□□ -0.21
RPN1-208	ENST00000497415	OR2F1	Q13607	317 aa		13.73	□□□□□ -0.21
RPN1-208	ENST00000497415	MZT2B	Q6NZ67	158 aa		13.73	□□□□□ -0.21
RPN1-208	ENST00000497415	TMEM14EP	Q6UXP3	125 aa		13.73	□□□□□ -0.21
RPN1-208	ENST00000497415	SIGLEC15	Q6ZMC9	328 aa		13.73	□□□□□ -0.21
RPN1-208	ENST00000497415	ACOT7L	Q6ZUV0	252 aa		13.73	□□□□□ -0.21
RPN1-208	ENST00000497415	RAB40C	Q96S21	281 aa		13.73	□□□□□ -0.21
RPN1-208	ENST00000497415	SEC22C	Q9BRL7	303 aa		13.73	□□□□□ -0.21
RPN1-208	ENST00000497415	WDR12	Q9GZL7	423 aa	Known RBP	13.73	□□□□□ -0.21
RPN1-208	ENST00000497415	SEPSECS	Q9HD40	501 aa	Known RBP	13.73	□□□□□ -0.21
RPN1-208	ENST00000497415	PFDN2	Q9UHV9	154 aa		13.73	□□□□□ -0.21
RPN1-208	ENST00000497415	AGRN	O00468	2067 aa		13.73	□□□□□ -0.21
RPN1-208	ENST00000497415	ZNF688	P0C7X2	276 aa		13.72	□□□□□ -0.21
RPN1-208	ENST00000497415	LYZ	P61626	148 aa		13.72	□□□□□ -0.21
RPN1-208	ENST00000497415	ZNF846	Q147U1	533 aa		13.72	□□□□□ -0.21
RPN1-208	ENST00000497415	C1orf194	Q5T5A4	169 aa		13.72	□□□□□ -0.21
RPN1-208	ENST00000497415	TMEM144	Q7Z5S9	345 aa		13.72	□□□□□ -0.21
RPN1-208	ENST00000497415	NRN1	Q9NPD7	142 aa		13.72	□□□□□ -0.21
RPN1-208	ENST00000497415	GSKIP	Q9P0R6	139 aa		13.72	□□□□□ -0.21
RPN1-208	ENST00000497415	RCL1	Q9Y2P8	373 aa	Known RBP	13.72	□□□□□ -0.21
RPN1-208	ENST00000497415	CCS	O14618	274 aa		13.71	□□□□□ -0.21
RPN1-208	ENST00000497415	TSC22D2	O75157	780 aa		13.71	□□□□□ -0.21
RPN1-208	ENST00000497415	UPK1B	O75841	260 aa		13.71	□□□□□ -0.21
RPN1-208	ENST00000497415	SCGB1D2	O95969	90 aa		13.71	□□□□□ -0.21
RPN1-208	ENST00000497415	MBP	P02686	304 aa	Predicted RBP	13.71	□□□□□ -0.21
RPN1-208	ENST00000497415	C12orf45	Q8N5I9	185 aa	Predicted RBP	13.71	□□□□□ -0.21
RPN1-208	ENST00000497415	CCNK	O75909	580 aa		13.7	□□□□□ -0.22
RPN1-208	ENST00000497415	DLK1	P80370	383 aa		13.7	□□□□□ -0.22
RPN1-208	ENST00000497415	AKR1C1	Q04828	323 aa		13.7	□□□□□ -0.22
RPN1-208	ENST00000497415	TRPT1	Q86TN4	253 aa	Known RBP	13.7	□□□□□ -0.22
RPN1-208	ENST00000497415	STH	Q8IWL8	128 aa		13.7	□□□□□ -0.22
RPN1-208	ENST00000497415	GATAD1	Q8WUU5	269 aa		13.7	□□□□□ -0.22
RPN1-208	ENST00000497415	FBXL17	Q9UF56	701 aa		13.7	□□□□□ -0.22
RPN1-208	ENST00000497415	SLC45A2	Q9UMX9	530 aa		13.7	□□□□□ -0.22
RPN1-208	ENST00000497415	C7orf66	A4D0T2	115 aa		13.69	□□□□□ -0.22
RPN1-208	ENST00000497415	FNDC10	F2Z333	226 aa		13.69	□□□□□ -0.22
RPN1-208	ENST00000497415	IL5	P05113	134 aa		13.69	□□□□□ -0.22
RPN1-208	ENST00000497415	IFITM3	Q01628	133 aa		13.69	□□□□□ -0.22
RPN1-208	ENST00000497415	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.69	□□□□□ -0.22
RPN1-208	ENST00000497415	BPIFC	Q8NFQ6	507 aa		13.69	□□□□□ -0.22
RPN1-208	ENST00000497415	BATF3	Q9NR55	127 aa		13.69	□□□□□ -0.22
RPN1-208	ENST00000497415	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.68	□□□□□ -0.22
RPN1-208	ENST00000497415		A0A0J9YWU9	116 aa		13.68	□□□□□ -0.22
RPN1-208	ENST00000497415	KNCN	A6PVL3	124 aa		13.68	□□□□□ -0.22
RPN1-208	ENST00000497415	METTL15P1	P0C7V9	234 aa		13.68	□□□□□ -0.22

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