RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 PIEZO2Q9H5I5 2752 aa6.65□□□□□ -1.34
USP54-215ENST00000497106 XKRY2A2RUG3 117 aa6.65□□□□□ -1.34
USP54-215ENST00000497106 A6NDX4 124 aa6.65□□□□□ -1.34
USP54-215ENST00000497106 NDUFB8O95169 186 aa6.65□□□□□ -1.34
USP54-215ENST00000497106 HIST1H1EP10412 219 aaKnown RBP6.65□□□□□ -1.34
USP54-215ENST00000497106 Q8N6K4 173 aa6.65□□□□□ -1.34
USP54-215ENST00000497106 UFC1Q9Y3C8 167 aa6.65□□□□□ -1.34
USP54-215ENST00000497106 ARID1AO14497 2285 aa6.65□□□□□ -1.34
USP54-215ENST00000497106 LINC00614P0C842 121 aa6.65□□□□□ -1.35
USP54-215ENST00000497106 GPR183P32249 361 aa6.65□□□□□ -1.35
USP54-215ENST00000497106 C15orf32Q32M92 178 aa6.65□□□□□ -1.35
USP54-215ENST00000497106 UTF1Q5T230 341 aa6.65□□□□□ -1.35
USP54-215ENST00000497106 ZFP82Q8N141 532 aa6.65□□□□□ -1.35
USP54-215ENST00000497106 BLNKQ8WV28 456 aa6.65□□□□□ -1.35
USP54-215ENST00000497106 TANC2Q9HCD6 1990 aa6.65□□□□□ -1.35
USP54-215ENST00000497106 IGHV7-81A0A0B4J1V7 117 aa6.65□□□□□ -1.35
USP54-215ENST00000497106 PSMB11A5LHX3 300 aa6.65□□□□□ -1.35
USP54-215ENST00000497106 C5orf52A6NGY3 159 aa6.65□□□□□ -1.35
USP54-215ENST00000497106 TEX22C9J3V5 150 aa6.65□□□□□ -1.35
USP54-215ENST00000497106 FOLR2P14207 255 aa6.65□□□□□ -1.35
USP54-215ENST00000497106 SRD5A1P18405 259 aa6.65□□□□□ -1.35
USP54-215ENST00000497106 FCGR2BP31994 310 aaPredicted RBP6.65□□□□□ -1.35
USP54-215ENST00000497106 DEFB112Q30KQ8 113 aa6.65□□□□□ -1.35
USP54-215ENST00000497106 TEX38Q6PEX7 206 aa6.65□□□□□ -1.35
USP54-215ENST00000497106 GOLT1BQ9Y3E0 138 aa6.65□□□□□ -1.35
USP54-215ENST00000497106 CD5LO43866 347 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 CD5P06127 495 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 PKIAP61925 76 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 HCFC1P51610 2035 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 PKD1L2Q7Z442 2459 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 MGST1P10620 155 aaKnown RBP6.64□□□□□ -1.35
USP54-215ENST00000497106 RPL11P62913 178 aaKnown RBP6.64□□□□□ -1.35
USP54-215ENST00000497106 PAFAH1B2P68402 229 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 RPEL1Q2QD12 228 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 MIR17HGQ75NE6 70 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 RPP25LQ8N5L8 163 aaKnown RBP6.64□□□□□ -1.35
USP54-215ENST00000497106 GGCTO75223 188 aaKnown RBP6.64□□□□□ -1.35
USP54-215ENST00000497106 FCN3O75636 299 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 OR2C1O95371 312 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 SRP19P09132 144 aaKnown RBP6.64□□□□□ -1.35
USP54-215ENST00000497106 GUCA2BQ16661 112 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 CLEC19AQ6UXS0 136 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 CYB561D1Q8N8Q1 229 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 C5orf17Q8NAS9 161 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 LYPD6BQ8NI32 183 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 SERTAD4Q9NUC0 356 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 ATRXP46100 2492 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 CLDN34H7C241 214 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 ELANEP08246 267 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 OR10J4P0C629 311 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 PRR20EP86478 221 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 PRR20CP86479 221 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 PRR20DP86480 221 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 PRR20BP86481 221 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 PRR20AP86496 221 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 DNLZQ5SXM8 178 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 SMIM15Q7Z3B0 74 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 SLC50A1Q9BRV3 221 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 CDC42EP3Q9UKI2 254 aa6.64□□□□□ -1.35
USP54-215ENST00000497106 IGLV11-55A0A075B6I3 123 aa6.63□□□□□ -1.35
USP54-215ENST00000497106 H3BQ15 152 aa6.63□□□□□ -1.35
USP54-215ENST00000497106 PSG1P11464 419 aa6.63□□□□□ -1.35
USP54-215ENST00000497106 S100A2P29034 98 aa6.63□□□□□ -1.35
USP54-215ENST00000497106 DDTP30046 118 aa6.63□□□□□ -1.35
USP54-215ENST00000497106 RITA1Q96K30 269 aa6.63□□□□□ -1.35
USP54-215ENST00000497106 PSMG3-AS1Q96PY0 264 aa6.63□□□□□ -1.35
USP54-215ENST00000497106 OTORQ9NRC9 128 aa6.63□□□□□ -1.35
USP54-215ENST00000497106 RAI1Q7Z5J4 1906 aaPredicted RBP6.63□□□□□ -1.35
USP54-215ENST00000497106 ZNF320A2RRD8 509 aa6.63□□□□□ -1.35
USP54-215ENST00000497106 NBEAP1P0C6P0 100 aa6.63□□□□□ -1.35
USP54-215ENST00000497106 OR2T8A6NH00 312 aa6.63□□□□□ -1.35
USP54-215ENST00000497106 ICAM4Q14773 271 aa6.63□□□□□ -1.35
USP54-215ENST00000497106 COX19Q49B96 90 aa6.63□□□□□ -1.35
USP54-215ENST00000497106 LYPD1Q8N2G4 141 aa6.63□□□□□ -1.35
USP54-215ENST00000497106 VSIRQ9H7M9 311 aa6.63□□□□□ -1.35
USP54-215ENST00000497106 IGHG2P01859 326 aa6.62□□□□□ -1.35
USP54-215ENST00000497106 RPL15P61313 204 aaKnown RBP6.62□□□□□ -1.35
USP54-215ENST00000497106 SUMO1P63165 101 aaKnown RBP6.62□□□□□ -1.35
USP54-215ENST00000497106 C9orf139Q6ZV77 190 aa6.62□□□□□ -1.35
USP54-215ENST00000497106 PIP4P2Q8N4L2 257 aa6.62□□□□□ -1.35
USP54-215ENST00000497106 MAPK1IP1LQ8NDC0 245 aa6.62□□□□□ -1.35
USP54-215ENST00000497106 I3L2K1 104 aa6.62□□□□□ -1.35
USP54-215ENST00000497106 FABP9Q0Z7S8 132 aa6.62□□□□□ -1.35
USP54-215ENST00000497106 AWAT1Q58HT5 328 aa6.62□□□□□ -1.35
USP54-215ENST00000497106 PEMTQ9UBM1 199 aa6.62□□□□□ -1.35
USP54-215ENST00000497106 IGHV3-48P01763 117 aa6.62□□□□□ -1.35
USP54-215ENST00000497106 IGLC1P0CG04 106 aa6.62□□□□□ -1.35
USP54-215ENST00000497106 PLP1P60201 277 aa6.62□□□□□ -1.35
USP54-215ENST00000497106 HIVEP3Q5T1R4 2406 aa6.62□□□□□ -1.35
USP54-215ENST00000497106 RARRES2Q99969 163 aa6.62□□□□□ -1.35
USP54-215ENST00000497106 SHANK2-AS3Q9BTD1 123 aa6.62□□□□□ -1.35
USP54-215ENST00000497106 SLC25A39Q9BZJ4 359 aaPredicted RBP6.62□□□□□ -1.35
USP54-215ENST00000497106 TMEM14CQ9P0S9 112 aa6.62□□□□□ -1.35
USP54-215ENST00000497106 CXorf65A6NEN9 183 aa6.61□□□□□ -1.35
USP54-215ENST00000497106 CLEC3BP05452 202 aa6.61□□□□□ -1.35
USP54-215ENST00000497106 PDE6HQ13956 83 aa6.61□□□□□ -1.35
USP54-215ENST00000497106 PGPA6NDG6 321 aa6.61□□□□□ -1.35
USP54-215ENST00000497106 PRSS46E5RG02 174 aa6.61□□□□□ -1.35
USP54-215ENST00000497106 GATA2P23769 480 aaPredicted RBP6.61□□□□□ -1.35
USP54-215ENST00000497106 RANP62826 216 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms