RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 RPL29P47914 159 aaKnown RBP14.02□□□□□ -0.16
RGP1-202ENST00000496906 FHL3Q13643 280 aa14.02□□□□□ -0.16
RGP1-202ENST00000496906 RPEL1Q2QD12 228 aa14.02□□□□□ -0.16
RGP1-202ENST00000496906 STPG3Q8N7X2 389 aa14.02□□□□□ -0.16
RGP1-202ENST00000496906 C3orf56Q8N813 242 aa14.02□□□□□ -0.16
RGP1-202ENST00000496906 ZNF709Q8N972 641 aa14.02□□□□□ -0.16
RGP1-202ENST00000496906 BPIFCQ8NFQ6 507 aa14.02□□□□□ -0.16
RGP1-202ENST00000496906 TIMM9Q9Y5J7 89 aa14.02□□□□□ -0.16
RGP1-202ENST00000496906 PUS1Q9Y606 427 aaKnown RBP eCLIP14.02□□□□□ -0.16
RGP1-202ENST00000496906 C17orf112F2Z3M2 114 aa14.01□□□□□ -0.17
RGP1-202ENST00000496906 TPT1P13693 172 aaKnown RBP14.01□□□□□ -0.17
RGP1-202ENST00000496906 ZP3P21754 424 aa14.01□□□□□ -0.17
RGP1-202ENST00000496906 HOXD3P31249 432 aaPredicted RBP14.01□□□□□ -0.17
RGP1-202ENST00000496906 EIF5AP63241 154 aaKnown RBP14.01□□□□□ -0.17
RGP1-202ENST00000496906 PRR20EP86478 221 aa14.01□□□□□ -0.17
RGP1-202ENST00000496906 PRR20CP86479 221 aa14.01□□□□□ -0.17
RGP1-202ENST00000496906 PRR20DP86480 221 aa14.01□□□□□ -0.17
RGP1-202ENST00000496906 PRR20BP86481 221 aa14.01□□□□□ -0.17
RGP1-202ENST00000496906 PRR20AP86496 221 aa14.01□□□□□ -0.17
RGP1-202ENST00000496906 MIC13Q5XKP0 118 aa14.01□□□□□ -0.17
RGP1-202ENST00000496906 OR51G1Q8NGK1 321 aa14.01□□□□□ -0.17
RGP1-202ENST00000496906 Q8WTZ3 238 aa14.01□□□□□ -0.17
RGP1-202ENST00000496906 DPF1Q92782 380 aa14.01□□□□□ -0.17
RGP1-202ENST00000496906 SH3BGRL3Q9H299 93 aa14.01□□□□□ -0.17
RGP1-202ENST00000496906 RFNGQ9Y644 331 aa14.01□□□□□ -0.17
RGP1-202ENST00000496906 CCL24O00175 119 aa14□□□□□ -0.17
RGP1-202ENST00000496906 NDUFA4O00483 81 aa14□□□□□ -0.17
RGP1-202ENST00000496906 LINC00869P0C866 280 aa14□□□□□ -0.17
RGP1-202ENST00000496906 B2MP61769 119 aa14□□□□□ -0.17
RGP1-202ENST00000496906 GPHB5Q86YW7 130 aa14□□□□□ -0.17
RGP1-202ENST00000496906 BAP18Q8IXM2 172 aa14□□□□□ -0.17
RGP1-202ENST00000496906 GNPNAT1Q96EK6 184 aaPredicted RBP14□□□□□ -0.17
RGP1-202ENST00000496906 PSMG3Q9BT73 122 aaPredicted RBP14□□□□□ -0.17
RGP1-202ENST00000496906 ZFAND3Q9H8U3 227 aa14□□□□□ -0.17
RGP1-202ENST00000496906 KCNIP2Q9NS61 270 aa14□□□□□ -0.17
RGP1-202ENST00000496906 PXMP4Q9Y6I8 212 aa14□□□□□ -0.17
RGP1-202ENST00000496906 SLURP1P55000 103 aa14□□□□□ -0.17
RGP1-202ENST00000496906 TOMM20LQ6UXN7 152 aa14□□□□□ -0.17
RGP1-202ENST00000496906 UNQ9165/PRO28630Q6UXU0 137 aa14□□□□□ -0.17
RGP1-202ENST00000496906 ST8SIA2Q92186 375 aa14□□□□□ -0.17
RGP1-202ENST00000496906 RCC1LQ96I51 464 aaKnown RBP14□□□□□ -0.17
RGP1-202ENST00000496906 SLC25A32Q9H2D1 315 aa14□□□□□ -0.17
RGP1-202ENST00000496906 SLC39A9Q9NUM3 307 aa14□□□□□ -0.17
RGP1-202ENST00000496906 WI2-2373I1.2A0A1W2PRP0 233 aa13.99□□□□□ -0.17
RGP1-202ENST00000496906 YIF1AO95070 293 aa13.99□□□□□ -0.17
RGP1-202ENST00000496906 CFDP00746 253 aaPredicted RBP13.99□□□□□ -0.17
RGP1-202ENST00000496906 IL4P05112 153 aa13.99□□□□□ -0.17
RGP1-202ENST00000496906 SPP1P10451 314 aa13.99□□□□□ -0.17
RGP1-202ENST00000496906 SHISA2Q6UWI4 295 aa13.99□□□□□ -0.17
RGP1-202ENST00000496906 TMEM190Q8WZ59 177 aa13.99□□□□□ -0.17
RGP1-202ENST00000496906 TSPAN15O95858 294 aa13.98□□□□□ -0.17
RGP1-202ENST00000496906 PLP1P60201 277 aa13.98□□□□□ -0.17
RGP1-202ENST00000496906 LYZP61626 148 aa13.98□□□□□ -0.17
RGP1-202ENST00000496906 KLF5Q13887 457 aaPredicted RBP13.98□□□□□ -0.17
RGP1-202ENST00000496906 FAM106AQ4KMX7 169 aa13.98□□□□□ -0.17
RGP1-202ENST00000496906 OR2G3Q8NGZ4 309 aa13.98□□□□□ -0.17
RGP1-202ENST00000496906 RNF125Q96EQ8 232 aa13.98□□□□□ -0.17
RGP1-202ENST00000496906 STAB1Q9NY15 2570 aa13.98□□□□□ -0.17
RGP1-202ENST00000496906 IGHV3OR16-8A0A075B7F1 116 aa13.97□□□□□ -0.17
RGP1-202ENST00000496906 MYCNOSP40205 109 aa13.97□□□□□ -0.17
RGP1-202ENST00000496906 USF2Q15853 346 aaPredicted RBP13.97□□□□□ -0.17
RGP1-202ENST00000496906 Q6ZRG5 221 aa13.97□□□□□ -0.17
RGP1-202ENST00000496906 REC114Q7Z4M0 266 aa13.97□□□□□ -0.17
RGP1-202ENST00000496906 C1QL4Q86Z23 238 aa13.97□□□□□ -0.17
RGP1-202ENST00000496906 SEC11BP0C7V7 166 aa13.96□□□□□ -0.17
RGP1-202ENST00000496906 ELLP55199 621 aaPredicted RBP13.96□□□□□ -0.17
RGP1-202ENST00000496906 SYNJ2BPP57105 145 aa13.96□□□□□ -0.17
RGP1-202ENST00000496906 SERF2P84101 59 aa13.96□□□□□ -0.17
RGP1-202ENST00000496906 FFAR4Q5NUL3 377 aa13.96□□□□□ -0.17
RGP1-202ENST00000496906 OR4F17Q8NGA8 305 aa13.96□□□□□ -0.17
RGP1-202ENST00000496906 OR4F4Q96R69 305 aa13.96□□□□□ -0.17
RGP1-202ENST00000496906 C20orf24Q9BUV8 137 aa13.96□□□□□ -0.17
RGP1-202ENST00000496906 PBDC1Q9BVG4 233 aa13.96□□□□□ -0.17
RGP1-202ENST00000496906 ZNF320A2RRD8 509 aa13.96□□□□□ -0.18
RGP1-202ENST00000496906 LGALS9O00182 355 aa13.96□□□□□ -0.18
RGP1-202ENST00000496906 ORM2P19652 201 aa13.96□□□□□ -0.18
RGP1-202ENST00000496906 GCSAMLQ5JQS6 135 aa13.96□□□□□ -0.18
RGP1-202ENST00000496906 PXDC1Q5TGL8 231 aa13.96□□□□□ -0.18
RGP1-202ENST00000496906 OR1B1Q8NGR6 318 aa13.96□□□□□ -0.18
RGP1-202ENST00000496906 DLX4Q92988 240 aaPredicted RBP13.96□□□□□ -0.18
RGP1-202ENST00000496906 DOK5Q9P104 306 aa13.96□□□□□ -0.18
RGP1-202ENST00000496906 ANK2Q01484 3957 aa13.95□□□□□ -0.18
RGP1-202ENST00000496906 A8MWP6 167 aa13.95□□□□□ -0.18
RGP1-202ENST00000496906 TMED6Q8WW62 240 aa13.95□□□□□ -0.18
RGP1-202ENST00000496906 MRPL27Q9P0M9 148 aaKnown RBP13.95□□□□□ -0.18
RGP1-202ENST00000496906 PATE2Q6UY27 113 aa13.94□□□□□ -0.18
RGP1-202ENST00000496906 TMEM37Q8WXS4 190 aa13.94□□□□□ -0.18
RGP1-202ENST00000496906 VSIRQ9H7M9 311 aa13.94□□□□□ -0.18
RGP1-202ENST00000496906 DAZ1Q9NQZ3 744 aaKnown RBP13.94□□□□□ -0.18
RGP1-202ENST00000496906 PLA2G2EQ9NZK7 142 aa13.94□□□□□ -0.18
RGP1-202ENST00000496906 UFC1Q9Y3C8 167 aa13.94□□□□□ -0.18
RGP1-202ENST00000496906 WNK1Q9H4A3 2382 aa13.93□□□□□ -0.18
RGP1-202ENST00000496906 COX7A2P2O60397 106 aa13.93□□□□□ -0.18
RGP1-202ENST00000496906 HYPMO75409 117 aa13.93□□□□□ -0.18
RGP1-202ENST00000496906 PF4P02776 101 aa13.93□□□□□ -0.18
RGP1-202ENST00000496906 EIF5AL1Q6IS14 154 aaKnown RBP13.93□□□□□ -0.18
RGP1-202ENST00000496906 OR1L4Q8NGR5 311 aa13.93□□□□□ -0.18
RGP1-202ENST00000496906 PHYHIPLQ96FC7 376 aa13.93□□□□□ -0.18
RGP1-202ENST00000496906 RABAC1Q9UI14 185 aa13.93□□□□□ -0.18
RGP1-202ENST00000496906 ELOA3CA0A087WX78 387 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms