RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ZFP36P26651 326 aaKnown RBP10.35□□□□□ -0.75
GARNL3-220ENST00000496711 EFNA4P52798 201 aa10.35□□□□□ -0.75
GARNL3-220ENST00000496711 LYZP61626 148 aa10.35□□□□□ -0.75
GARNL3-220ENST00000496711 IBA57Q5T440 356 aaKnown RBP10.35□□□□□ -0.75
GARNL3-220ENST00000496711 MINOS1Q5TGZ0 78 aa10.35□□□□□ -0.75
GARNL3-220ENST00000496711 IGFBPL1Q8WX77 278 aa10.35□□□□□ -0.75
GARNL3-220ENST00000496711 MINOS1-NBL1R4GNA1 71 aa10.35□□□□□ -0.75
GARNL3-220ENST00000496711 K7EIM0 57 aa10.34□□□□□ -0.75
GARNL3-220ENST00000496711 PSG1P11464 419 aa10.34□□□□□ -0.75
GARNL3-220ENST00000496711 FBLN7Q53RD9 439 aa10.34□□□□□ -0.75
GARNL3-220ENST00000496711 BLNKQ8WV28 456 aa10.34□□□□□ -0.75
GARNL3-220ENST00000496711 SIRPDQ9H106 197 aa10.34□□□□□ -0.75
GARNL3-220ENST00000496711 AMBPP02760 352 aa10.34□□□□□ -0.75
GARNL3-220ENST00000496711 ADMP35318 185 aa10.34□□□□□ -0.75
GARNL3-220ENST00000496711 RANP62826 216 aaKnown RBP10.34□□□□□ -0.75
GARNL3-220ENST00000496711 RPL19P84098 196 aaKnown RBP10.34□□□□□ -0.75
GARNL3-220ENST00000496711 DNLZQ5SXM8 178 aa10.34□□□□□ -0.75
GARNL3-220ENST00000496711 OR8I2Q8N0Y5 310 aa10.34□□□□□ -0.75
GARNL3-220ENST00000496711 DYNAPQ8N1N2 210 aa10.34□□□□□ -0.75
GARNL3-220ENST00000496711 FAM103A1Q9BTL3 118 aaKnown RBP10.34□□□□□ -0.75
GARNL3-220ENST00000496711 ITPR1Q14643 2758 aa10.33□□□□□ -0.76
GARNL3-220ENST00000496711 IGHV2-70DA0A0C4DH43 119 aa10.33□□□□□ -0.76
GARNL3-220ENST00000496711 C19orf84I3L1E1 186 aa10.33□□□□□ -0.76
GARNL3-220ENST00000496711 SLC25A5P05141 298 aaKnown RBP10.33□□□□□ -0.76
GARNL3-220ENST00000496711 NBEAP1P0C6P0 100 aa10.33□□□□□ -0.76
GARNL3-220ENST00000496711 CBLN1P23435 193 aa10.33□□□□□ -0.76
GARNL3-220ENST00000496711 GNG5P63218 68 aa10.33□□□□□ -0.76
GARNL3-220ENST00000496711 Q8N6K4 173 aa10.33□□□□□ -0.76
GARNL3-220ENST00000496711 NHLRC2Q8NBF2 726 aa10.33□□□□□ -0.76
GARNL3-220ENST00000496711 ARPC1AQ92747 370 aa10.33□□□□□ -0.76
GARNL3-220ENST00000496711 LINC00479Q96M42 142 aa10.33□□□□□ -0.76
GARNL3-220ENST00000496711 RBM14Q96PK6 669 aaKnown RBP10.33□□□□□ -0.76
GARNL3-220ENST00000496711 TRBV9A0A0B4J1U6 114 aa10.32□□□□□ -0.76
GARNL3-220ENST00000496711 NPIPB5A8MRT5 1133 aa10.32□□□□□ -0.76
GARNL3-220ENST00000496711 IGKV1-17P01599 117 aa10.32□□□□□ -0.76
GARNL3-220ENST00000496711 SNRPCP09234 159 aaKnown RBP10.32□□□□□ -0.76
GARNL3-220ENST00000496711 UBE2G1P62253 170 aa10.32□□□□□ -0.76
GARNL3-220ENST00000496711 TMEM183BQ1AE95 376 aa10.32□□□□□ -0.76
GARNL3-220ENST00000496711 BAGE2Q86Y30 109 aa10.32□□□□□ -0.76
GARNL3-220ENST00000496711 SLC25A39Q9BZJ4 359 aaPredicted RBP10.32□□□□□ -0.76
GARNL3-220ENST00000496711 MRPL18Q9H0U6 180 aaKnown RBP10.32□□□□□ -0.76
GARNL3-220ENST00000496711 EPDR1Q9UM22 224 aa10.32□□□□□ -0.76
GARNL3-220ENST00000496711 TRAV34A0A0B4J273 112 aa10.32□□□□□ -0.76
GARNL3-220ENST00000496711 RD3LP0DJH9 198 aa10.32□□□□□ -0.76
GARNL3-220ENST00000496711 CX3CL1P78423 397 aa10.32□□□□□ -0.76
GARNL3-220ENST00000496711 EBI3Q14213 229 aa10.32□□□□□ -0.76
GARNL3-220ENST00000496711 LEMD1Q68G75 181 aa10.32□□□□□ -0.76
GARNL3-220ENST00000496711 CDPF1Q6NVV7 123 aa10.32□□□□□ -0.76
GARNL3-220ENST00000496711 ZNF562Q6V9R5 426 aa10.32□□□□□ -0.76
GARNL3-220ENST00000496711 ZNF600Q6ZNG1 722 aa10.32□□□□□ -0.76
GARNL3-220ENST00000496711 FAM231DQ6ZW35 169 aa10.32□□□□□ -0.76
GARNL3-220ENST00000496711 C5orf17Q8NAS9 161 aa10.32□□□□□ -0.76
GARNL3-220ENST00000496711 SERTAD4Q9NUC0 356 aa10.32□□□□□ -0.76
GARNL3-220ENST00000496711 TMEM14CQ9P0S9 112 aa10.32□□□□□ -0.76
GARNL3-220ENST00000496711 TBL2Q9Y4P3 447 aaKnown RBP10.32□□□□□ -0.76
GARNL3-220ENST00000496711 SMIM27A0A1W2PRY6 76 aa10.31□□□□□ -0.76
GARNL3-220ENST00000496711 PGPA6NDG6 321 aa10.31□□□□□ -0.76
GARNL3-220ENST00000496711 NCBP2LA6PVI3 153 aaKnown RBP10.31□□□□□ -0.76
GARNL3-220ENST00000496711 ZNF705GA8MUZ8 300 aaPredicted RBP10.31□□□□□ -0.76
GARNL3-220ENST00000496711 SNURFLB1AK76 121 aa10.31□□□□□ -0.76
GARNL3-220ENST00000496711 TOX4O94842 621 aa10.31□□□□□ -0.76
GARNL3-220ENST00000496711 TMEM11P17152 192 aa10.31□□□□□ -0.76
GARNL3-220ENST00000496711 IER3P46695 156 aa10.31□□□□□ -0.76
GARNL3-220ENST00000496711 TMEM18Q96B42 140 aa10.31□□□□□ -0.76
GARNL3-220ENST00000496711 SMIM12Q96EX1 92 aa10.31□□□□□ -0.76
GARNL3-220ENST00000496711 ATG101Q9BSB4 218 aa10.31□□□□□ -0.76
GARNL3-220ENST00000496711 WNK2Q9Y3S1 2297 aa10.3□□□□□ -0.76
GARNL3-220ENST00000496711 IGLV11-55A0A075B6I3 123 aa10.3□□□□□ -0.76
GARNL3-220ENST00000496711 LINC00587B1AMM8 73 aa10.3□□□□□ -0.76
GARNL3-220ENST00000496711 TOMM40O96008 361 aa10.3□□□□□ -0.76
GARNL3-220ENST00000496711 MT-ND6P03923 174 aa10.3□□□□□ -0.76
GARNL3-220ENST00000496711 NDPQ00604 133 aa10.3□□□□□ -0.76
GARNL3-220ENST00000496711 COX19Q49B96 90 aa10.3□□□□□ -0.76
GARNL3-220ENST00000496711 ASPHD1Q5U4P2 390 aa10.3□□□□□ -0.76
GARNL3-220ENST00000496711 WDR73Q6P4I2 378 aa10.3□□□□□ -0.76
GARNL3-220ENST00000496711 GBGT1Q8N5D6 347 aa10.3□□□□□ -0.76
GARNL3-220ENST00000496711 GNB1LQ9BYB4 327 aa10.3□□□□□ -0.76
GARNL3-220ENST00000496711 BPESC1Q9GZL8 116 aa10.3□□□□□ -0.76
GARNL3-220ENST00000496711 Q9H3A6 140 aa10.3□□□□□ -0.76
GARNL3-220ENST00000496711 MRPL27Q9P0M9 148 aaKnown RBP10.3□□□□□ -0.76
GARNL3-220ENST00000496711 RPH3ALQ9UNE2 315 aa10.3□□□□□ -0.76
GARNL3-220ENST00000496711 KLF12Q9Y4X4 402 aa10.3□□□□□ -0.76
GARNL3-220ENST00000496711 TCL1AP56279 114 aa10.3□□□□□ -0.76
GARNL3-220ENST00000496711 KLF17Q5JT82 389 aaPredicted RBP10.3□□□□□ -0.76
GARNL3-220ENST00000496711 OR5R1Q8NH85 324 aa10.3□□□□□ -0.76
GARNL3-220ENST00000496711 FMC1Q96HJ9 113 aa10.3□□□□□ -0.76
GARNL3-220ENST00000496711 ZNF48Q96MX3 618 aaPredicted RBP10.3□□□□□ -0.76
GARNL3-220ENST00000496711 TBX15Q96SF7 602 aa10.3□□□□□ -0.76
GARNL3-220ENST00000496711 TRAV30A0A087WSZ9 112 aa10.29□□□□□ -0.76
GARNL3-220ENST00000496711 H3BRN7 92 aa10.29□□□□□ -0.76
GARNL3-220ENST00000496711 H3BTX0 84 aa10.29□□□□□ -0.76
GARNL3-220ENST00000496711 GATCO43716 136 aaKnown RBP10.29□□□□□ -0.76
GARNL3-220ENST00000496711 HIST1H1EP10412 219 aaKnown RBP10.29□□□□□ -0.76
GARNL3-220ENST00000496711 UBE2E1P51965 193 aa10.29□□□□□ -0.76
GARNL3-220ENST00000496711 JOSD1Q15040 202 aaPredicted RBP10.29□□□□□ -0.76
GARNL3-220ENST00000496711 TTC9CQ8N5M4 171 aa10.29□□□□□ -0.76
GARNL3-220ENST00000496711 RNF125Q96EQ8 232 aa10.29□□□□□ -0.76
GARNL3-220ENST00000496711 TMEM68Q96MH6 324 aa10.29□□□□□ -0.76
GARNL3-220ENST00000496711 SHANK2-AS3Q9BTD1 123 aa10.29□□□□□ -0.76
GARNL3-220ENST00000496711 CHRDL1Q9BU40 450 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms