RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 RAB5CP51148 216 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 RUNX1Q01196 453 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 FFAR4Q5NUL3 377 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 EBLN2Q6P2I7 272 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 SLC51BQ86UW2 128 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 RNF125Q96EQ8 232 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 SLC25A22Q9H936 323 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 OR7C2O60412 319 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 TMEM50AO95807 157 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 TOMM40O96008 361 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 IGLV1-40P01703 118 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 C1QBP02746 253 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 FCGR2BP31994 310 aaPredicted RBP6.73□□□□□ -1.33
U2AF1-212ENST00000496462 GPHB5Q86YW7 130 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 MRPL32Q9BYC8 188 aaKnown RBP6.73□□□□□ -1.33
U2AF1-212ENST00000496462 DNAJC4Q9NNZ3 241 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 SERF2P84101 59 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 TMEM14EPQ6UXP3 125 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 TCTE3Q8IZS6 198 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 ZNF502Q8TBZ5 544 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 UHRF2Q96PU4 802 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 IGHV3-35A0A0C4DH35 117 aa6.72□□□□□ -1.33
U2AF1-212ENST00000496462 PPIFP30405 207 aaKnown RBP6.72□□□□□ -1.33
U2AF1-212ENST00000496462 NUTF2P61970 127 aaKnown RBP6.72□□□□□ -1.33
U2AF1-212ENST00000496462 DOK5Q9P104 306 aa6.72□□□□□ -1.33
U2AF1-212ENST00000496462 AMY1AP04745 511 aa6.72□□□□□ -1.33
U2AF1-212ENST00000496462 PXMP4Q9Y6I8 212 aa6.72□□□□□ -1.33
U2AF1-212ENST00000496462 PRSS47A8MTI9 375 aa6.72□□□□□ -1.33
U2AF1-212ENST00000496462 K7EMT4 169 aa6.72□□□□□ -1.33
U2AF1-212ENST00000496462 IGHV3-48P01763 117 aa6.72□□□□□ -1.33
U2AF1-212ENST00000496462 AARDQ4LEZ3 155 aa6.72□□□□□ -1.33
U2AF1-212ENST00000496462 NDFIP1Q9BT67 221 aa6.72□□□□□ -1.33
U2AF1-212ENST00000496462 KLK15Q9H2R5 256 aa6.72□□□□□ -1.33
U2AF1-212ENST00000496462 NOTCH3Q9UM47 2321 aa6.72□□□□□ -1.33
U2AF1-212ENST00000496462 WNK1Q9H4A3 2382 aa6.71□□□□□ -1.33
U2AF1-212ENST00000496462 TRAV25A0A0B4J276 109 aa6.71□□□□□ -1.33
U2AF1-212ENST00000496462 C15orf62A8K5M9 175 aa6.71□□□□□ -1.33
U2AF1-212ENST00000496462 SPP1P10451 314 aa6.71□□□□□ -1.33
U2AF1-212ENST00000496462 CD300CQ08708 224 aa6.71□□□□□ -1.33
U2AF1-212ENST00000496462 KHDC3LQ587J8 217 aa6.71□□□□□ -1.33
U2AF1-212ENST00000496462 WFDC3Q8IUB2 231 aa6.71□□□□□ -1.33
U2AF1-212ENST00000496462 OR9G4Q8NGQ1 327 aa6.71□□□□□ -1.33
U2AF1-212ENST00000496462 TAF15Q92804 592 aaKnown RBP eCLIP6.71□□□□□ -1.33
U2AF1-212ENST00000496462 C16orf92Q96LL3 132 aa6.71□□□□□ -1.33
U2AF1-212ENST00000496462 AQP10Q96PS8 301 aa6.71□□□□□ -1.33
U2AF1-212ENST00000496462 TMEM167BQ9NRX6 74 aa6.71□□□□□ -1.33
U2AF1-212ENST00000496462 MFSD2BA6NFX1 497 aa6.71□□□□□ -1.34
U2AF1-212ENST00000496462 LINC01548A6NM66 108 aa6.71□□□□□ -1.34
U2AF1-212ENST00000496462 BCL2L11O43521 198 aa6.71□□□□□ -1.34
U2AF1-212ENST00000496462 BRWD1-AS2P59051 145 aa6.71□□□□□ -1.34
U2AF1-212ENST00000496462 TREML4Q6UXN2 200 aa6.71□□□□□ -1.34
U2AF1-212ENST00000496462 TMEM190Q8WZ59 177 aa6.71□□□□□ -1.34
U2AF1-212ENST00000496462 P0C879 139 aa6.71□□□□□ -1.34
U2AF1-212ENST00000496462 HIST1H1EP10412 219 aaKnown RBP6.71□□□□□ -1.34
U2AF1-212ENST00000496462 TAGLN2P37802 199 aaKnown RBP6.71□□□□□ -1.34
U2AF1-212ENST00000496462 ZNF345Q14585 488 aa6.71□□□□□ -1.34
U2AF1-212ENST00000496462 SMUG1Q53HV7 270 aa6.71□□□□□ -1.34
U2AF1-212ENST00000496462 FAM78BQ5VT40 261 aa6.71□□□□□ -1.34
U2AF1-212ENST00000496462 FAM122CQ6P4D5 195 aa6.71□□□□□ -1.34
U2AF1-212ENST00000496462 TMUB2Q71RG4 321 aa6.71□□□□□ -1.34
U2AF1-212ENST00000496462 AGPAT2O15120 278 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 PSG9Q00887 426 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 GAMTQ14353 236 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 GUK1Q16774 197 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 TCTEX1D4Q5JR98 221 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 C1orf194Q5T5A4 169 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 TCF24Q7RTU0 167 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 OR11H7Q8NGC8 314 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 OR5AC2Q9NZP5 309 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 IGKV3-7A0A075B6H7 116 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 IGHV4OR15-8A0A075B7B6 117 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 A0A087WW49 117 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 PPP5D1E7EU14 171 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 LGALS9O00182 355 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 CXCL3P19876 107 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 RPL29P47914 159 aaKnown RBP6.7□□□□□ -1.34
U2AF1-212ENST00000496462 CDC34P49427 236 aaPredicted RBP6.7□□□□□ -1.34
U2AF1-212ENST00000496462 BAP18Q8IXM2 172 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 RHPN1-AS1Q9BWJ2 59 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 WDR83OSQ9Y284 106 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 TRBV9A0A0B4J1U6 114 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 TFPI2P48307 235 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 H2BFSP57053 126 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 NHLH2Q02577 135 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 OPCMLQ14982 345 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 REC114Q7Z4M0 266 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 OR10G4Q8NGN3 311 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 OR10G9Q8NGN4 311 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 OR10G7Q8NGN6 311 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 FANCD2OSQ96PS1 177 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 TNFSF18Q9UNG2 199 aa6.7□□□□□ -1.34
U2AF1-212ENST00000496462 MPTX1A8MV57 137 aa6.69□□□□□ -1.34
U2AF1-212ENST00000496462 I3L2K1 104 aa6.69□□□□□ -1.34
U2AF1-212ENST00000496462 ZNF207O43670 478 aaKnown RBP6.69□□□□□ -1.34
U2AF1-212ENST00000496462 M6PRP20645 277 aa6.69□□□□□ -1.34
U2AF1-212ENST00000496462 TM4SF20Q53R12 229 aa6.69□□□□□ -1.34
U2AF1-212ENST00000496462 PQLC2Q6ZP29 291 aa6.69□□□□□ -1.34
U2AF1-212ENST00000496462 RAX2Q96IS3 184 aa6.69□□□□□ -1.34
U2AF1-212ENST00000496462 SLC50A1Q9BRV3 221 aa6.69□□□□□ -1.34
U2AF1-212ENST00000496462 PSMG3Q9BT73 122 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms