RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 RNF126Q9BV68 326 aa9.36□□□□□ -0.91
USF1-207ENST00000496363 TMEM56-RWDD3S4R434 201 aa9.36□□□□□ -0.91
USF1-207ENST00000496363 IGKV3-20P01619 116 aa9.35□□□□□ -0.91
USF1-207ENST00000496363 AMBPP02760 352 aa9.35□□□□□ -0.91
USF1-207ENST00000496363 AKAIN1P0CW23 69 aa9.35□□□□□ -0.91
USF1-207ENST00000496363 SULT1A3P0DMM9 295 aa9.35□□□□□ -0.91
USF1-207ENST00000496363 SULT1A4P0DMN0 295 aa9.35□□□□□ -0.91
USF1-207ENST00000496363 FXYD7P58549 80 aa9.35□□□□□ -0.91
USF1-207ENST00000496363 ETFRF1Q6IPR1 90 aa9.35□□□□□ -0.91
USF1-207ENST00000496363 OR51S1Q8NGJ8 323 aa9.35□□□□□ -0.91
USF1-207ENST00000496363 GSTZ1O43708 216 aaPredicted RBP9.34□□□□□ -0.91
USF1-207ENST00000496363 IFNA10P01566 189 aa9.34□□□□□ -0.91
USF1-207ENST00000496363 HLA-DRB4P13762 266 aa9.34□□□□□ -0.91
USF1-207ENST00000496363 MRPS10P82664 201 aaKnown RBP9.34□□□□□ -0.91
USF1-207ENST00000496363 IL18Q14116 193 aa9.34□□□□□ -0.91
USF1-207ENST00000496363 CLVS1Q8IUQ0 354 aaPredicted RBP9.34□□□□□ -0.91
USF1-207ENST00000496363 RNF125Q96EQ8 232 aa9.34□□□□□ -0.91
USF1-207ENST00000496363 PRRT1Q99946 306 aa9.34□□□□□ -0.91
USF1-207ENST00000496363 PBDC1Q9BVG4 233 aa9.34□□□□□ -0.91
USF1-207ENST00000496363 C1QTNF4Q9BXJ3 329 aa9.34□□□□□ -0.91
USF1-207ENST00000496363 WDR12Q9GZL7 423 aaKnown RBP9.34□□□□□ -0.91
USF1-207ENST00000496363 RBKSQ9H477 322 aa9.34□□□□□ -0.91
USF1-207ENST00000496363 HLA-DRB4X5D2U9 266 aa9.34□□□□□ -0.91
USF1-207ENST00000496363 EMP1P54849 157 aa9.33□□□□□ -0.92
USF1-207ENST00000496363 NUTF2P61970 127 aaKnown RBP9.33□□□□□ -0.92
USF1-207ENST00000496363 ZNF90Q03938 601 aa9.33□□□□□ -0.92
USF1-207ENST00000496363 ZNF705AQ6ZN79 300 aaPredicted RBP9.33□□□□□ -0.92
USF1-207ENST00000496363 LYZL2Q7Z4W2 148 aa9.33□□□□□ -0.92
USF1-207ENST00000496363 LGI3Q8N145 548 aa9.33□□□□□ -0.92
USF1-207ENST00000496363 DTD1Q8TEA8 209 aa9.33□□□□□ -0.92
USF1-207ENST00000496363 IL22RA2Q969J5 263 aa9.33□□□□□ -0.92
USF1-207ENST00000496363 LINC00052Q96N35 136 aa9.33□□□□□ -0.92
USF1-207ENST00000496363 SEPSECSQ9HD40 501 aaKnown RBP9.33□□□□□ -0.92
USF1-207ENST00000496363 HSPB7Q9UBY9 170 aa9.33□□□□□ -0.92
USF1-207ENST00000496363 IGKV1D-37A0A075B6S9 117 aa9.32□□□□□ -0.92
USF1-207ENST00000496363 IGHV3OR16-12A0A075B7B8 117 aa9.32□□□□□ -0.92
USF1-207ENST00000496363 A0A1B0GVY2 172 aa9.32□□□□□ -0.92
USF1-207ENST00000496363 M0R2N4 97 aa9.32□□□□□ -0.92
USF1-207ENST00000496363 CTDSPLO15194 276 aa9.32□□□□□ -0.92
USF1-207ENST00000496363 NKX2-1P43699 371 aaPredicted RBP9.32□□□□□ -0.92
USF1-207ENST00000496363 SUPT4H1P63272 117 aaKnown RBP9.32□□□□□ -0.92
USF1-207ENST00000496363 KLF9Q13886 244 aaPredicted RBP9.32□□□□□ -0.92
USF1-207ENST00000496363 SMCO1Q147U7 214 aa9.32□□□□□ -0.92
USF1-207ENST00000496363 GPR141Q7Z602 305 aa9.32□□□□□ -0.92
USF1-207ENST00000496363 NOXA1Q86UR1 476 aa9.32□□□□□ -0.92
USF1-207ENST00000496363 POM121L12Q8N7R1 296 aa9.32□□□□□ -0.92
USF1-207ENST00000496363 DIRAS2Q96HU8 199 aa9.32□□□□□ -0.92
USF1-207ENST00000496363 NDUFAF3Q9BU61 184 aa9.32□□□□□ -0.92
USF1-207ENST00000496363 U3KQ87 197 aa9.32□□□□□ -0.92
USF1-207ENST00000496363 A0A0B4J2A0 478 aa9.31□□□□□ -0.92
USF1-207ENST00000496363 ANKRD20A5PA0PJZ0 165 aa9.31□□□□□ -0.92
USF1-207ENST00000496363 ZFP92A6NM28 416 aa9.31□□□□□ -0.92
USF1-207ENST00000496363 ZNF705FA8MVS1 300 aaPredicted RBP9.31□□□□□ -0.92
USF1-207ENST00000496363 SOCS3O14543 225 aa9.31□□□□□ -0.92
USF1-207ENST00000496363 ZNF705DP0CH99 300 aaPredicted RBP9.31□□□□□ -0.92
USF1-207ENST00000496363 ZNF705BP0CI00 300 aaPredicted RBP9.31□□□□□ -0.92
USF1-207ENST00000496363 AKR1C4P17516 323 aa9.31□□□□□ -0.92
USF1-207ENST00000496363 ALDH3B2P48448 385 aa9.31□□□□□ -0.92
USF1-207ENST00000496363 CCR6P51684 374 aa9.31□□□□□ -0.92
USF1-207ENST00000496363 LYZP61626 148 aa9.31□□□□□ -0.92
USF1-207ENST00000496363 OR2F1Q13607 317 aa9.31□□□□□ -0.92
USF1-207ENST00000496363 GAMTQ14353 236 aa9.31□□□□□ -0.92
USF1-207ENST00000496363 LINC00336Q6ZUF6 198 aa9.31□□□□□ -0.92
USF1-207ENST00000496363 SAV1Q9H4B6 383 aaPredicted RBP9.31□□□□□ -0.92
USF1-207ENST00000496363 MCUBQ9NWR8 336 aa9.31□□□□□ -0.92
USF1-207ENST00000496363 SHPKQ9UHJ6 478 aa9.31□□□□□ -0.92
USF1-207ENST00000496363 KCNIP3Q9Y2W7 256 aa9.31□□□□□ -0.92
USF1-207ENST00000496363 MUC4Q99102 2169 aa9.3□□□□□ -0.92
USF1-207ENST00000496363 NACAE9PAV3 2078 aa9.3□□□□□ -0.92
USF1-207ENST00000496363 F6UB75 175 aa9.3□□□□□ -0.92
USF1-207ENST00000496363 RTL8CO15255 209 aa9.3□□□□□ -0.92
USF1-207ENST00000496363 P0DMU3 169 aa9.3□□□□□ -0.92
USF1-207ENST00000496363 FAM231AP0DMU4 169 aa9.3□□□□□ -0.92
USF1-207ENST00000496363 FAM231CP0DMU5 169 aa9.3□□□□□ -0.92
USF1-207ENST00000496363 OR8G2PQ6IF36 304 aa9.3□□□□□ -0.92
USF1-207ENST00000496363 FOXI2Q6ZQN5 318 aa9.3□□□□□ -0.92
USF1-207ENST00000496363 ZNF709Q8N972 641 aa9.3□□□□□ -0.92
USF1-207ENST00000496363 OR4B1Q8NGF8 309 aa9.3□□□□□ -0.92
USF1-207ENST00000496363 OR1S1Q8NH92 325 aa9.3□□□□□ -0.92
USF1-207ENST00000496363 SLC35E1Q96K37 410 aa9.3□□□□□ -0.92
USF1-207ENST00000496363 NEU1Q99519 415 aa9.3□□□□□ -0.92
USF1-207ENST00000496363 MRPS26Q9BYN8 205 aaKnown RBP9.3□□□□□ -0.92
USF1-207ENST00000496363 SLC35B3Q9H1N7 401 aa9.3□□□□□ -0.92
USF1-207ENST00000496363 PLA2G2EQ9NZK7 142 aa9.3□□□□□ -0.92
USF1-207ENST00000496363 CACFD1Q9UGQ2 172 aa9.3□□□□□ -0.92
USF1-207ENST00000496363 SCP2D1Q9UJQ7 156 aa9.3□□□□□ -0.92
USF1-207ENST00000496363 ABCA13Q86UQ4 5058 aa9.29□□□□□ -0.92
USF1-207ENST00000496363 SPART-AS1P0CW21 52 aa9.29□□□□□ -0.92
USF1-207ENST00000496363 IAPPP10997 89 aa9.29□□□□□ -0.92
USF1-207ENST00000496363 GPX4P36969 197 aaPredicted RBP9.29□□□□□ -0.92
USF1-207ENST00000496363 NUP62P37198 522 aaPredicted RBP9.29□□□□□ -0.92
USF1-207ENST00000496363 PSMB3P49720 205 aa9.29□□□□□ -0.92
USF1-207ENST00000496363 COQ8AQ8NI60 647 aa9.29□□□□□ -0.92
USF1-207ENST00000496363 DYNC2LI1Q8TCX1 351 aa9.29□□□□□ -0.92
USF1-207ENST00000496363 CCDC59Q9P031 241 aaKnown RBP9.29□□□□□ -0.92
USF1-207ENST00000496363 RFNGQ9Y644 331 aa9.29□□□□□ -0.92
USF1-207ENST00000496363 HSPG2P98160 4391 aa9.28□□□□□ -0.92
USF1-207ENST00000496363 PRSS29PA6NIE9 313 aa9.28□□□□□ -0.92
USF1-207ENST00000496363 ID1P41134 155 aa9.28□□□□□ -0.92
USF1-207ENST00000496363 ZNF79Q15937 498 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms