RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 SFRP2Q96HF1 295 aa16.82■□□□□ 0.28
FGFR1-223ENST00000496296 SRSF8Q9BRL6 282 aaKnown RBP16.82■□□□□ 0.28
FGFR1-223ENST00000496296 HIF1ANQ9NWT6 349 aa16.82■□□□□ 0.28
FGFR1-223ENST00000496296 SPG11Q96JI7 2443 aa16.81■□□□□ 0.28
FGFR1-223ENST00000496296 IGHV1-69DA0A0B4J2H0 117 aa16.81■□□□□ 0.28
FGFR1-223ENST00000496296 IGHV1-69P01742 117 aa16.81■□□□□ 0.28
FGFR1-223ENST00000496296 FAM106CPP0CH98 169 aa16.81■□□□□ 0.28
FGFR1-223ENST00000496296 OR4X1Q8NH49 305 aa16.81■□□□□ 0.28
FGFR1-223ENST00000496296 PITPNC1Q9UKF7 332 aa16.81■□□□□ 0.28
FGFR1-223ENST00000496296 PPP5D1E7EU14 171 aa16.8■□□□□ 0.28
FGFR1-223ENST00000496296 CORTO00230 105 aa16.8■□□□□ 0.28
FGFR1-223ENST00000496296 CD24P25063 80 aa16.8■□□□□ 0.28
FGFR1-223ENST00000496296 LOXL1Q08397 574 aaPredicted RBP16.8■□□□□ 0.28
FGFR1-223ENST00000496296 PYY3Q5JQD4 70 aa16.8■□□□□ 0.28
FGFR1-223ENST00000496296 NECAP1Q8NC96 275 aa16.8■□□□□ 0.28
FGFR1-223ENST00000496296 OR1P1Q8NH06 330 aa16.8■□□□□ 0.28
FGFR1-223ENST00000496296 NPIPB3Q92617 1050 aa16.8■□□□□ 0.28
FGFR1-223ENST00000496296 NAV3Q8IVL0 2385 aa16.8■□□□□ 0.28
FGFR1-223ENST00000496296 MDFIC2A0A1B0GVS7 189 aa16.8■□□□□ 0.28
FGFR1-223ENST00000496296 NDUFA3O95167 84 aa16.8■□□□□ 0.28
FGFR1-223ENST00000496296 EBI3Q14213 229 aa16.8■□□□□ 0.28
FGFR1-223ENST00000496296 PIP4P2Q8N4L2 257 aa16.8■□□□□ 0.28
FGFR1-223ENST00000496296 OCC1Q8TAD7 63 aa16.8■□□□□ 0.28
FGFR1-223ENST00000496296 SLC25A2Q9BXI2 301 aa16.8■□□□□ 0.28
FGFR1-223ENST00000496296 DMRT1Q9Y5R6 373 aa16.8■□□□□ 0.28
FGFR1-223ENST00000496296 A0A096LNT2 108 aa16.79■□□□□ 0.28
FGFR1-223ENST00000496296 TRAV40A0A0B4J280 105 aa16.79■□□□□ 0.28
FGFR1-223ENST00000496296 LINC00587B1AMM8 73 aa16.79■□□□□ 0.28
FGFR1-223ENST00000496296 TMEM11P17152 192 aa16.79■□□□□ 0.28
FGFR1-223ENST00000496296 SSBP2P81877 361 aaPredicted RBP16.79■□□□□ 0.28
FGFR1-223ENST00000496296 TEX38Q6PEX7 206 aa16.79■□□□□ 0.28
FGFR1-223ENST00000496296 PRSS57Q6UWY2 283 aa16.79■□□□□ 0.28
FGFR1-223ENST00000496296 TRGV9Q99603 122 aa16.79■□□□□ 0.28
FGFR1-223ENST00000496296 TRAV9-1A0A075B6T8 112 aa16.78■□□□□ 0.28
FGFR1-223ENST00000496296 TEX22C9J3V5 150 aa16.78■□□□□ 0.28
FGFR1-223ENST00000496296 MFAP2P55001 183 aa16.78■□□□□ 0.28
FGFR1-223ENST00000496296 BPIFB3P59826 476 aa16.78■□□□□ 0.28
FGFR1-223ENST00000496296 COA6Q5JTJ3 125 aaKnown RBP16.78■□□□□ 0.28
FGFR1-223ENST00000496296 TMEM116Q8NCL8 245 aa16.78■□□□□ 0.28
FGFR1-223ENST00000496296 AJUBAQ96IF1 538 aa16.78■□□□□ 0.28
FGFR1-223ENST00000496296 GPR61Q9BZJ8 451 aa16.78■□□□□ 0.28
FGFR1-223ENST00000496296 MRPL36Q9P0J6 103 aaKnown RBP16.78■□□□□ 0.28
FGFR1-223ENST00000496296 WNK2Q9Y3S1 2297 aa16.78■□□□□ 0.28
FGFR1-223ENST00000496296 OR7C2O60412 319 aa16.78■□□□□ 0.28
FGFR1-223ENST00000496296 ACTL10Q5JWF8 245 aa16.78■□□□□ 0.28
FGFR1-223ENST00000496296 POLQO75417 2590 aa16.77■□□□□ 0.28
FGFR1-223ENST00000496296 A0A1W2PPQ1 181 aa16.77■□□□□ 0.27
FGFR1-223ENST00000496296 NCBP2LA6PVI3 153 aaKnown RBP16.77■□□□□ 0.27
FGFR1-223ENST00000496296 RNF223E7ERA6 249 aa16.77■□□□□ 0.27
FGFR1-223ENST00000496296 CNIH1O95406 144 aa16.77■□□□□ 0.27
FGFR1-223ENST00000496296 PATE2Q6UY27 113 aa16.77■□□□□ 0.27
FGFR1-223ENST00000496296 C1RLQ9NZP8 487 aa16.77■□□□□ 0.27
FGFR1-223ENST00000496296 F11RQ9Y624 299 aaKnown RBP16.77■□□□□ 0.27
FGFR1-223ENST00000496296 MED13LQ71F56 2210 aa16.77■□□□□ 0.27
FGFR1-223ENST00000496296 IGHV3OR16-10A0A075B7F0 116 aa16.76■□□□□ 0.27
FGFR1-223ENST00000496296 PGPEP1LA6NFU8 196 aa16.76■□□□□ 0.27
FGFR1-223ENST00000496296 COX7A2P2O60397 106 aa16.76■□□□□ 0.27
FGFR1-223ENST00000496296 C5orf64Q2M2E5 130 aa16.76■□□□□ 0.27
FGFR1-223ENST00000496296 GFI1BQ5VTD9 330 aa16.76■□□□□ 0.27
FGFR1-223ENST00000496296 C10orf113Q5VZT2 155 aa16.76■□□□□ 0.27
FGFR1-223ENST00000496296 Q8N6K4 173 aa16.76■□□□□ 0.27
FGFR1-223ENST00000496296 OR10G8Q8NGN5 311 aa16.76■□□□□ 0.27
FGFR1-223ENST00000496296 OR10D4PQ8NGN7 298 aa16.76■□□□□ 0.27
FGFR1-223ENST00000496296 GGTLC3B5MD39 225 aa16.76■□□□□ 0.27
FGFR1-223ENST00000496296 RUSC1-AS1Q66K80 236 aa16.76■□□□□ 0.27
FGFR1-223ENST00000496296 TMEM183AQ8IXX5 376 aa16.76■□□□□ 0.27
FGFR1-223ENST00000496296 OR5T1Q8NG75 326 aa16.76■□□□□ 0.27
FGFR1-223ENST00000496296 SRSF12Q8WXF0 261 aaKnown RBP16.76■□□□□ 0.27
FGFR1-223ENST00000496296 J3QLI3 93 aa16.75■□□□□ 0.27
FGFR1-223ENST00000496296 K7EN84 100 aa16.75■□□□□ 0.27
FGFR1-223ENST00000496296 FCN1O00602 326 aa16.75■□□□□ 0.27
FGFR1-223ENST00000496296 REG1AP05451 166 aa16.75■□□□□ 0.27
FGFR1-223ENST00000496296 OR10J4P0C629 311 aa16.75■□□□□ 0.27
FGFR1-223ENST00000496296 PLP1P60201 277 aa16.75■□□□□ 0.27
FGFR1-223ENST00000496296 MORN5Q5VZ52 161 aa16.75■□□□□ 0.27
FGFR1-223ENST00000496296 C22orf15Q8WYQ4 148 aa16.75■□□□□ 0.27
FGFR1-223ENST00000496296 PDZD2O15018 2839 aa16.74■□□□□ 0.27
FGFR1-223ENST00000496296 ZNF90Q03938 601 aa16.74■□□□□ 0.27
FGFR1-223ENST00000496296 Q96MF0 132 aa16.74■□□□□ 0.27
FGFR1-223ENST00000496296 AURKAIP1Q9NWT8 199 aaPredicted RBP16.74■□□□□ 0.27
FGFR1-223ENST00000496296 PLXNB1O43157 2135 aa16.74■□□□□ 0.27
FGFR1-223ENST00000496296 HELTA6NFD8 242 aa16.73■□□□□ 0.27
FGFR1-223ENST00000496296 TGFAP01135 160 aa16.73■□□□□ 0.27
FGFR1-223ENST00000496296 RPL15P61313 204 aaKnown RBP16.73■□□□□ 0.27
FGFR1-223ENST00000496296 BRD3OSQ6XYD6 125 aa16.73■□□□□ 0.27
FGFR1-223ENST00000496296 OR5AU1Q8NGC0 362 aa16.73■□□□□ 0.27
FGFR1-223ENST00000496296 TNFRSF19Q9NS68 423 aa16.73■□□□□ 0.27
FGFR1-223ENST00000496296 ZNF355PQ9NSJ1 428 aa16.73■□□□□ 0.27
FGFR1-223ENST00000496296 ABCA2Q9BZC7 2435 aa16.73■□□□□ 0.27
FGFR1-223ENST00000496296 IGHV4-38-2P0DP08 117 aa16.73■□□□□ 0.27
FGFR1-223ENST00000496296 CRYBB3P26998 211 aa16.73■□□□□ 0.27
FGFR1-223ENST00000496296 FAM120AOSQ5T036 256 aa16.73■□□□□ 0.27
FGFR1-223ENST00000496296 IL36BQ9NZH7 164 aa16.73■□□□□ 0.27
FGFR1-223ENST00000496296 TRAV5A0A0B4J249 113 aa16.72■□□□□ 0.27
FGFR1-223ENST00000496296 UBE2L3P68036 154 aaKnown RBP16.72■□□□□ 0.27
FGFR1-223ENST00000496296 FXYD3Q14802 87 aa16.72■□□□□ 0.27
FGFR1-223ENST00000496296 MAPK1IP1LQ8NDC0 245 aa16.72■□□□□ 0.27
FGFR1-223ENST00000496296 STXBP6Q8NFX7 210 aa16.72■□□□□ 0.27
FGFR1-223ENST00000496296 SGMS2Q8NHU3 365 aa16.72■□□□□ 0.27
FGFR1-223ENST00000496296 MISP3Q96FF7 219 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms