RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 RFNGQ9Y644 331 aa16.72■□□□□ 0.27
ECHDC3-205ENST00000496136 TOMM40O96008 361 aa16.72■□□□□ 0.27
ECHDC3-205ENST00000496136 FABP1P07148 127 aa16.72■□□□□ 0.27
ECHDC3-205ENST00000496136 C4BPBP20851 252 aa16.72■□□□□ 0.27
ECHDC3-205ENST00000496136 HOXD3P31249 432 aaPredicted RBP16.72■□□□□ 0.27
ECHDC3-205ENST00000496136 GPHB5Q86YW7 130 aa16.72■□□□□ 0.27
ECHDC3-205ENST00000496136 BPIFCQ8NFQ6 507 aa16.72■□□□□ 0.27
ECHDC3-205ENST00000496136 PUS1Q9Y606 427 aaKnown RBP eCLIP16.72■□□□□ 0.27
ECHDC3-205ENST00000496136 ZP3P21754 424 aa16.71■□□□□ 0.27
ECHDC3-205ENST00000496136 ATP6V0CP27449 155 aa16.71■□□□□ 0.27
ECHDC3-205ENST00000496136 RPL29P47914 159 aaKnown RBP16.71■□□□□ 0.27
ECHDC3-205ENST00000496136 FHL3Q13643 280 aa16.71■□□□□ 0.27
ECHDC3-205ENST00000496136 MIC13Q5XKP0 118 aa16.71■□□□□ 0.27
ECHDC3-205ENST00000496136 SHISA2Q6UWI4 295 aa16.71■□□□□ 0.27
ECHDC3-205ENST00000496136 ZNF709Q8N972 641 aa16.71■□□□□ 0.27
ECHDC3-205ENST00000496136 GINS3Q9BRX5 216 aa16.71■□□□□ 0.27
ECHDC3-205ENST00000496136 YIF1AO95070 293 aa16.7■□□□□ 0.26
ECHDC3-205ENST00000496136 LINC00869P0C866 280 aa16.7■□□□□ 0.26
ECHDC3-205ENST00000496136 PRR20EP86478 221 aa16.7■□□□□ 0.26
ECHDC3-205ENST00000496136 PRR20CP86479 221 aa16.7■□□□□ 0.26
ECHDC3-205ENST00000496136 PRR20DP86480 221 aa16.7■□□□□ 0.26
ECHDC3-205ENST00000496136 PRR20BP86481 221 aa16.7■□□□□ 0.26
ECHDC3-205ENST00000496136 PRR20AP86496 221 aa16.7■□□□□ 0.26
ECHDC3-205ENST00000496136 TOMM20LQ6UXN7 152 aa16.7■□□□□ 0.26
ECHDC3-205ENST00000496136 SLC51BQ86UW2 128 aa16.7■□□□□ 0.26
ECHDC3-205ENST00000496136 OR51G1Q8NGK1 321 aa16.7■□□□□ 0.26
ECHDC3-205ENST00000496136 C17orf112F2Z3M2 114 aa16.69■□□□□ 0.26
ECHDC3-205ENST00000496136 NDUFA4O00483 81 aa16.69■□□□□ 0.26
ECHDC3-205ENST00000496136 SLURP1P55000 103 aa16.69■□□□□ 0.26
ECHDC3-205ENST00000496136 KLF5Q13887 457 aaPredicted RBP16.69■□□□□ 0.26
ECHDC3-205ENST00000496136 UNQ9165/PRO28630Q6UXU0 137 aa16.69■□□□□ 0.26
ECHDC3-205ENST00000496136 STPG3Q8N7X2 389 aa16.69■□□□□ 0.26
ECHDC3-205ENST00000496136 STOML3Q8TAV4 291 aa16.69■□□□□ 0.26
ECHDC3-205ENST00000496136 RCC1LQ96I51 464 aaKnown RBP16.69■□□□□ 0.26
ECHDC3-205ENST00000496136 FAM106AQ4KMX7 169 aa16.69■□□□□ 0.26
ECHDC3-205ENST00000496136 BAP18Q8IXM2 172 aa16.69■□□□□ 0.26
ECHDC3-205ENST00000496136 GNPNAT1Q96EK6 184 aaPredicted RBP16.69■□□□□ 0.26
ECHDC3-205ENST00000496136 SH3BGRL3Q9H299 93 aa16.69■□□□□ 0.26
ECHDC3-205ENST00000496136 PXMP4Q9Y6I8 212 aa16.69■□□□□ 0.26
ECHDC3-205ENST00000496136 IGHV3OR16-8A0A075B7F1 116 aa16.68■□□□□ 0.26
ECHDC3-205ENST00000496136 WI2-2373I1.2A0A1W2PRP0 233 aa16.68■□□□□ 0.26
ECHDC3-205ENST00000496136 IL4P05112 153 aa16.68■□□□□ 0.26
ECHDC3-205ENST00000496136 TPT1P13693 172 aaKnown RBP16.68■□□□□ 0.26
ECHDC3-205ENST00000496136 MYCNOSP40205 109 aa16.68■□□□□ 0.26
ECHDC3-205ENST00000496136 EIF5AP63241 154 aaKnown RBP16.68■□□□□ 0.26
ECHDC3-205ENST00000496136 ZFAND3Q9H8U3 227 aa16.68■□□□□ 0.26
ECHDC3-205ENST00000496136 SLC39A9Q9NUM3 307 aa16.68■□□□□ 0.26
ECHDC3-205ENST00000496136 TIMM9Q9Y5J7 89 aa16.68■□□□□ 0.26
ECHDC3-205ENST00000496136 ZNF320A2RRD8 509 aa16.67■□□□□ 0.26
ECHDC3-205ENST00000496136 CFDP00746 253 aaPredicted RBP16.67■□□□□ 0.26
ECHDC3-205ENST00000496136 B2MP61769 119 aa16.67■□□□□ 0.26
ECHDC3-205ENST00000496136 PSMG3Q9BT73 122 aaPredicted RBP16.67■□□□□ 0.26
ECHDC3-205ENST00000496136 SLC25A32Q9H2D1 315 aa16.67■□□□□ 0.26
ECHDC3-205ENST00000496136 SPP1P10451 314 aa16.66■□□□□ 0.26
ECHDC3-205ENST00000496136 SYNJ2BPP57105 145 aa16.66■□□□□ 0.26
ECHDC3-205ENST00000496136 Q6ZRG5 221 aa16.66■□□□□ 0.26
ECHDC3-205ENST00000496136 DLX4Q92988 240 aaPredicted RBP16.66■□□□□ 0.26
ECHDC3-205ENST00000496136 RNF125Q96EQ8 232 aa16.66■□□□□ 0.26
ECHDC3-205ENST00000496136 OR4F17Q8NGA8 305 aa16.66■□□□□ 0.26
ECHDC3-205ENST00000496136 TMEM190Q8WZ59 177 aa16.66■□□□□ 0.26
ECHDC3-205ENST00000496136 ST8SIA2Q92186 375 aa16.66■□□□□ 0.26
ECHDC3-205ENST00000496136 OR4F4Q96R69 305 aa16.66■□□□□ 0.26
ECHDC3-205ENST00000496136 C20orf24Q9BUV8 137 aa16.66■□□□□ 0.26
ECHDC3-205ENST00000496136 KCNIP2Q9NS61 270 aa16.66■□□□□ 0.26
ECHDC3-205ENST00000496136 TSPAN15O95858 294 aa16.65■□□□□ 0.26
ECHDC3-205ENST00000496136 ORM2P19652 201 aa16.65■□□□□ 0.26
ECHDC3-205ENST00000496136 PLP1P60201 277 aa16.65■□□□□ 0.26
ECHDC3-205ENST00000496136 LYZP61626 148 aa16.65■□□□□ 0.26
ECHDC3-205ENST00000496136 USF2Q15853 346 aaPredicted RBP16.65■□□□□ 0.26
ECHDC3-205ENST00000496136 C1QL4Q86Z23 238 aa16.65■□□□□ 0.26
ECHDC3-205ENST00000496136 PBDC1Q9BVG4 233 aa16.65■□□□□ 0.26
ECHDC3-205ENST00000496136 LGALS9O00182 355 aa16.64■□□□□ 0.25
ECHDC3-205ENST00000496136 SERF2P84101 59 aa16.64■□□□□ 0.25
ECHDC3-205ENST00000496136 OR2G3Q8NGZ4 309 aa16.64■□□□□ 0.25
ECHDC3-205ENST00000496136 FFAR4Q5NUL3 377 aa16.64■□□□□ 0.25
ECHDC3-205ENST00000496136 PATE2Q6UY27 113 aa16.64■□□□□ 0.25
ECHDC3-205ENST00000496136 REC114Q7Z4M0 266 aa16.64■□□□□ 0.25
ECHDC3-205ENST00000496136 OR1B1Q8NGR6 318 aa16.64■□□□□ 0.25
ECHDC3-205ENST00000496136 DOK5Q9P104 306 aa16.64■□□□□ 0.25
ECHDC3-205ENST00000496136 SEC11BP0C7V7 166 aa16.63■□□□□ 0.25
ECHDC3-205ENST00000496136 GCSAMLQ5JQS6 135 aa16.63■□□□□ 0.25
ECHDC3-205ENST00000496136 TMEM37Q8WXS4 190 aa16.63■□□□□ 0.25
ECHDC3-205ENST00000496136 MRPL27Q9P0M9 148 aaKnown RBP16.63■□□□□ 0.25
ECHDC3-205ENST00000496136 VWFP04275 2813 aa16.62■□□□□ 0.25
ECHDC3-205ENST00000496136 ZNF207O43670 478 aaKnown RBP16.62■□□□□ 0.25
ECHDC3-205ENST00000496136 HYPMO75409 117 aa16.62■□□□□ 0.25
ECHDC3-205ENST00000496136 PF4P02776 101 aa16.62■□□□□ 0.25
ECHDC3-205ENST00000496136 ELLP55199 621 aaPredicted RBP16.62■□□□□ 0.25
ECHDC3-205ENST00000496136 TM4SF20Q53R12 229 aa16.62■□□□□ 0.25
ECHDC3-205ENST00000496136 PXDC1Q5TGL8 231 aa16.62■□□□□ 0.25
ECHDC3-205ENST00000496136 TMED6Q8WW62 240 aa16.62■□□□□ 0.25
ECHDC3-205ENST00000496136 DNAJC4Q9NNZ3 241 aa16.62■□□□□ 0.25
ECHDC3-205ENST00000496136 K7EMT4 169 aa16.61■□□□□ 0.25
ECHDC3-205ENST00000496136 OR5G3P0C626 314 aa16.61■□□□□ 0.25
ECHDC3-205ENST00000496136 VSIRQ9H7M9 311 aa16.61■□□□□ 0.25
ECHDC3-205ENST00000496136 DAZ1Q9NQZ3 744 aaKnown RBP16.61■□□□□ 0.25
ECHDC3-205ENST00000496136 PLA2G2EQ9NZK7 142 aa16.61■□□□□ 0.25
ECHDC3-205ENST00000496136 UFC1Q9Y3C8 167 aa16.61■□□□□ 0.25
ECHDC3-205ENST00000496136 A8MWP6 167 aa16.61■□□□□ 0.25
ECHDC3-205ENST00000496136 OR9G4Q8NGQ1 327 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms