RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 SLC35E1Q96K37 410 aa9.31□□□□□ -0.92
PTPRF-214ENST00000496043 RAB40CQ96S21 281 aa9.31□□□□□ -0.92
PTPRF-214ENST00000496043 MFFQ9GZY8 342 aa9.31□□□□□ -0.92
PTPRF-214ENST00000496043 C11orf68Q9H3H3 251 aaKnown RBP9.31□□□□□ -0.92
PTPRF-214ENST00000496043 SEPSECSQ9HD40 501 aaKnown RBP9.31□□□□□ -0.92
PTPRF-214ENST00000496043 V9GYH0 126 aa9.31□□□□□ -0.92
PTPRF-214ENST00000496043 PLECQ15149 4684 aaKnown RBP9.3□□□□□ -0.92
PTPRF-214ENST00000496043 ZFP92A6NM28 416 aa9.3□□□□□ -0.92
PTPRF-214ENST00000496043 MED6O75586 246 aa9.3□□□□□ -0.92
PTPRF-214ENST00000496043 SFT2D2O95562 160 aa9.3□□□□□ -0.92
PTPRF-214ENST00000496043 FABP1P07148 127 aa9.3□□□□□ -0.92
PTPRF-214ENST00000496043 SNRPD3P62318 126 aaKnown RBP9.3□□□□□ -0.92
PTPRF-214ENST00000496043 RPP30P78346 268 aaKnown RBP9.3□□□□□ -0.92
PTPRF-214ENST00000496043 PSMG4Q5JS54 123 aa9.3□□□□□ -0.92
PTPRF-214ENST00000496043 ACTL10Q5JWF8 245 aa9.3□□□□□ -0.92
PTPRF-214ENST00000496043 TMED3Q9Y3Q3 217 aa9.3□□□□□ -0.92
PTPRF-214ENST00000496043 SNRPGP15A8MWD9 76 aa9.29□□□□□ -0.92
PTPRF-214ENST00000496043 FAM90A26D6RGX4 464 aa9.29□□□□□ -0.92
PTPRF-214ENST00000496043 GIG44P09565 113 aaPredicted RBP9.29□□□□□ -0.92
PTPRF-214ENST00000496043 NUP62P37198 522 aaPredicted RBP9.29□□□□□ -0.92
PTPRF-214ENST00000496043 NANOS2P60321 138 aaKnown RBP9.29□□□□□ -0.92
PTPRF-214ENST00000496043 ZNF79Q15937 498 aa9.29□□□□□ -0.92
PTPRF-214ENST00000496043 SPANXN2Q5MJ10 180 aa9.29□□□□□ -0.92
PTPRF-214ENST00000496043 SIGLEC15Q6ZMC9 328 aa9.29□□□□□ -0.92
PTPRF-214ENST00000496043 CENPSQ8N2Z9 138 aa9.29□□□□□ -0.92
PTPRF-214ENST00000496043 RNF125Q96EQ8 232 aa9.29□□□□□ -0.92
PTPRF-214ENST00000496043 CIB3Q96Q77 187 aaPredicted RBP9.29□□□□□ -0.92
PTPRF-214ENST00000496043 PBDC1Q9BVG4 233 aa9.29□□□□□ -0.92
PTPRF-214ENST00000496043 RBM38Q9H0Z9 239 aaKnown RBP9.29□□□□□ -0.92
PTPRF-214ENST00000496043 NRN1Q9NPD7 142 aa9.29□□□□□ -0.92
PTPRF-214ENST00000496043 PAIP2BQ9ULR5 123 aaKnown RBP9.29□□□□□ -0.92
PTPRF-214ENST00000496043 ZNF701M0R085 212 aaPredicted RBP9.28□□□□□ -0.92
PTPRF-214ENST00000496043 DEFB4AO15263 64 aa9.28□□□□□ -0.92
PTPRF-214ENST00000496043 IAPPP10997 89 aa9.28□□□□□ -0.92
PTPRF-214ENST00000496043 INPP1P49441 399 aa9.28□□□□□ -0.92
PTPRF-214ENST00000496043 NUTF2P61970 127 aaKnown RBP9.28□□□□□ -0.92
PTPRF-214ENST00000496043 ZNF90Q03938 601 aa9.28□□□□□ -0.92
PTPRF-214ENST00000496043 PPP1R1AQ13522 171 aa9.28□□□□□ -0.92
PTPRF-214ENST00000496043 OR8G2PQ6IF36 304 aa9.28□□□□□ -0.92
PTPRF-214ENST00000496043 FBXL17Q9UF56 701 aa9.28□□□□□ -0.92
PTPRF-214ENST00000496043 IGKV1D-37A0A075B6S9 117 aa9.27□□□□□ -0.93
PTPRF-214ENST00000496043 SYNGR2O43760 224 aa9.27□□□□□ -0.93
PTPRF-214ENST00000496043 HOXB5P09067 269 aa9.27□□□□□ -0.93
PTPRF-214ENST00000496043 MIFP14174 115 aa9.27□□□□□ -0.93
PTPRF-214ENST00000496043 ID1P41134 155 aa9.27□□□□□ -0.93
PTPRF-214ENST00000496043 UBE2MP61081 183 aaKnown RBP9.27□□□□□ -0.93
PTPRF-214ENST00000496043 C1orf194Q5T5A4 169 aa9.27□□□□□ -0.93
PTPRF-214ENST00000496043 TRGV9Q99603 122 aa9.27□□□□□ -0.93
PTPRF-214ENST00000496043 MAGT1Q9H0U3 335 aa9.27□□□□□ -0.93
PTPRF-214ENST00000496043 HYDINQ4G0P3 5121 aa9.27□□□□□ -0.93
PTPRF-214ENST00000496043 NAP1L6A6NFF2 107 aa9.26□□□□□ -0.93
PTPRF-214ENST00000496043 WRBO00258 174 aa9.26□□□□□ -0.93
PTPRF-214ENST00000496043 CFDP00746 253 aaPredicted RBP9.26□□□□□ -0.93
PTPRF-214ENST00000496043 NKX2-1P43699 371 aaPredicted RBP9.26□□□□□ -0.93
PTPRF-214ENST00000496043 LYZP61626 148 aa9.26□□□□□ -0.93
PTPRF-214ENST00000496043 OR2F1Q13607 317 aa9.26□□□□□ -0.93
PTPRF-214ENST00000496043 GGNBP1Q5YKI7 109 aa9.26□□□□□ -0.93
PTPRF-214ENST00000496043 Q8NAQ8 132 aa9.26□□□□□ -0.93
PTPRF-214ENST00000496043 PPP1R14BQ96C90 147 aa9.26□□□□□ -0.93
PTPRF-214ENST00000496043 C1QTNF4Q9BXJ3 329 aa9.26□□□□□ -0.93
PTPRF-214ENST00000496043 SRRQ9GZT4 340 aa9.26□□□□□ -0.93
PTPRF-214ENST00000496043 TBC1D24Q9ULP9 559 aa9.26□□□□□ -0.93
PTPRF-214ENST00000496043 IGHV4-28A0A0C4DH34 117 aa9.25□□□□□ -0.93
PTPRF-214ENST00000496043 C9orf170A2RU37 121 aa9.25□□□□□ -0.93
PTPRF-214ENST00000496043 ZNF705EA8MWA4 302 aaPredicted RBP9.25□□□□□ -0.93
PTPRF-214ENST00000496043 H3BMM0 161 aa9.25□□□□□ -0.93
PTPRF-214ENST00000496043 RBMY1A1P0DJD3 496 aaKnown RBP9.25□□□□□ -0.93
PTPRF-214ENST00000496043 RBMY1CP0DJD4 496 aa9.25□□□□□ -0.93
PTPRF-214ENST00000496043 C4BPBP20851 252 aa9.25□□□□□ -0.93
PTPRF-214ENST00000496043 RBMY1FQ15415 496 aaKnown RBP9.25□□□□□ -0.93
PTPRF-214ENST00000496043 TRIQKQ629K1 86 aa9.25□□□□□ -0.93
PTPRF-214ENST00000496043 LGALS9CQ6DKI2 356 aa9.25□□□□□ -0.93
PTPRF-214ENST00000496043 THAP8Q8NA92 274 aa9.25□□□□□ -0.93
PTPRF-214ENST00000496043 CSNK1G2-AS1Q8NCQ2 148 aa9.25□□□□□ -0.93
PTPRF-214ENST00000496043 C2CD4CQ8TF44 421 aa9.25□□□□□ -0.93
PTPRF-214ENST00000496043 HRH4Q9H3N8 390 aa9.25□□□□□ -0.93
PTPRF-214ENST00000496043 CLEC5AQ9NY25 188 aa9.25□□□□□ -0.93
PTPRF-214ENST00000496043 ALMS1Q8TCU4 4167 aa9.24□□□□□ -0.93
PTPRF-214ENST00000496043 AGRNO00468 2067 aa9.24□□□□□ -0.93
PTPRF-214ENST00000496043 CENPXA8MT69 81 aa9.24□□□□□ -0.93
PTPRF-214ENST00000496043 C11orf94C9JXX5 98 aa9.24□□□□□ -0.93
PTPRF-214ENST00000496043 NDUFB6O95139 128 aa9.24□□□□□ -0.93
PTPRF-214ENST00000496043 IFNA21P01568 189 aa9.24□□□□□ -0.93
PTPRF-214ENST00000496043 TCTAP57738 103 aa9.24□□□□□ -0.93
PTPRF-214ENST00000496043 ID3Q02535 119 aa9.24□□□□□ -0.93
PTPRF-214ENST00000496043 BAK1Q16611 211 aa9.24□□□□□ -0.93
PTPRF-214ENST00000496043 SPANXN5Q5MJ07 72 aa9.24□□□□□ -0.93
PTPRF-214ENST00000496043 OR8I2Q8N0Y5 310 aa9.24□□□□□ -0.93
PTPRF-214ENST00000496043 COQ8AQ8NI60 647 aa9.24□□□□□ -0.93
PTPRF-214ENST00000496043 LINC00052Q96N35 136 aa9.24□□□□□ -0.93
PTPRF-214ENST00000496043 STRAPQ9Y3F4 350 aaKnown RBP9.24□□□□□ -0.93
PTPRF-214ENST00000496043 X6R8D5 127 aa9.24□□□□□ -0.93
PTPRF-214ENST00000496043 HLA-DRB4P13762 266 aa9.23□□□□□ -0.93
PTPRF-214ENST00000496043 S100A7P31151 101 aa9.23□□□□□ -0.93
PTPRF-214ENST00000496043 XCL2Q9UBD3 114 aa9.23□□□□□ -0.93
PTPRF-214ENST00000496043 HLA-DRB4X5D2U9 266 aa9.23□□□□□ -0.93
PTPRF-214ENST00000496043 EPPK1P58107 5090 aaKnown RBP9.23□□□□□ -0.93
PTPRF-214ENST00000496043 IGKV1OR2-108A0A075B7D4 117 aa9.22□□□□□ -0.93
PTPRF-214ENST00000496043 ELOA3CA0A087WX78 387 aaPredicted RBP9.22□□□□□ -0.93
PTPRF-214ENST00000496043 LINC00854A0A1B0GVQ3 168 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms