RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 IGHV3OR16-12A0A075B7B8 117 aa8.58□□□□□ -1.04
SHROOM1-206ENST00000495680 TEX13DA0A0J9YY54 714 aaPredicted RBP8.58□□□□□ -1.04
SHROOM1-206ENST00000495680 RD3LP0DJH9 198 aa8.58□□□□□ -1.04
SHROOM1-206ENST00000495680 NPY1RP25929 384 aa8.58□□□□□ -1.04
SHROOM1-206ENST00000495680 TAS2R19P59542 299 aa8.58□□□□□ -1.04
SHROOM1-206ENST00000495680 CTF1Q16619 201 aa8.58□□□□□ -1.04
SHROOM1-206ENST00000495680 TMEM268Q5VZI3 342 aa8.58□□□□□ -1.04
SHROOM1-206ENST00000495680 ZNF709Q8N972 641 aa8.58□□□□□ -1.04
SHROOM1-206ENST00000495680 C1QTNF4Q9BXJ3 329 aa8.58□□□□□ -1.04
SHROOM1-206ENST00000495680 NACAE9PAV3 2078 aa8.58□□□□□ -1.04
SHROOM1-206ENST00000495680 HSPG2P98160 4391 aa8.57□□□□□ -1.04
SHROOM1-206ENST00000495680 SOCS3O14543 225 aa8.57□□□□□ -1.04
SHROOM1-206ENST00000495680 TNFAIP8O95379 198 aa8.57□□□□□ -1.04
SHROOM1-206ENST00000495680 SPART-AS1P0CW21 52 aa8.57□□□□□ -1.04
SHROOM1-206ENST00000495680 NKX2-1P43699 371 aaPredicted RBP8.57□□□□□ -1.04
SHROOM1-206ENST00000495680 NUTF2P61970 127 aaKnown RBP8.57□□□□□ -1.04
SHROOM1-206ENST00000495680 ZNF90Q03938 601 aa8.57□□□□□ -1.04
SHROOM1-206ENST00000495680 LGALS9BQ3B8N2 356 aa8.57□□□□□ -1.04
SHROOM1-206ENST00000495680 NMSQ5H8A3 153 aa8.57□□□□□ -1.04
SHROOM1-206ENST00000495680 MZT2AQ6P582 158 aa8.57□□□□□ -1.04
SHROOM1-206ENST00000495680 Q6ZR54 194 aa8.57□□□□□ -1.04
SHROOM1-206ENST00000495680 ZNF575Q86XF7 245 aa8.57□□□□□ -1.04
SHROOM1-206ENST00000495680 RNF125Q96EQ8 232 aa8.57□□□□□ -1.04
SHROOM1-206ENST00000495680 LINC00052Q96N35 136 aa8.57□□□□□ -1.04
SHROOM1-206ENST00000495680 NEU1Q99519 415 aa8.57□□□□□ -1.04
SHROOM1-206ENST00000495680 SLC35B3Q9H1N7 401 aa8.57□□□□□ -1.04
SHROOM1-206ENST00000495680 SAV1Q9H4B6 383 aaPredicted RBP8.57□□□□□ -1.04
SHROOM1-206ENST00000495680 SEPSECSQ9HD40 501 aaKnown RBP8.57□□□□□ -1.04
SHROOM1-206ENST00000495680 DKK2Q9UBU2 259 aa8.57□□□□□ -1.04
SHROOM1-206ENST00000495680 C14orf166Q9Y224 244 aaKnown RBP8.57□□□□□ -1.04
SHROOM1-206ENST00000495680 IGKV1D-37A0A075B6S9 117 aa8.56□□□□□ -1.04
SHROOM1-206ENST00000495680 CRYM-AS1A6NIL9 109 aa8.56□□□□□ -1.04
SHROOM1-206ENST00000495680 F6UB75 175 aa8.56□□□□□ -1.04
SHROOM1-206ENST00000495680 GABARAPH6UMI1 98 aa8.56□□□□□ -1.04
SHROOM1-206ENST00000495680 B3GALNT1O75752 331 aa8.56□□□□□ -1.04
SHROOM1-206ENST00000495680 GABARAPO95166 117 aa8.56□□□□□ -1.04
SHROOM1-206ENST00000495680 IFNA10P01566 189 aa8.56□□□□□ -1.04
SHROOM1-206ENST00000495680 ZNF182P17025 639 aaPredicted RBP8.56□□□□□ -1.04
SHROOM1-206ENST00000495680 FAM222AQ5U5X8 452 aa8.56□□□□□ -1.04
SHROOM1-206ENST00000495680 GPR107Q5VW38 600 aa8.56□□□□□ -1.04
SHROOM1-206ENST00000495680 PBDC1Q9BVG4 233 aa8.56□□□□□ -1.04
SHROOM1-206ENST00000495680 GPR132Q9UNW8 380 aa8.56□□□□□ -1.04
SHROOM1-206ENST00000495680 TMEM56-RWDD3S4R434 201 aa8.56□□□□□ -1.04
SHROOM1-206ENST00000495680 GSTZ1O43708 216 aaPredicted RBP8.55□□□□□ -1.04
SHROOM1-206ENST00000495680 HTN3P15516 51 aa8.55□□□□□ -1.04
SHROOM1-206ENST00000495680 ETFRF1Q6IPR1 90 aa8.55□□□□□ -1.04
SHROOM1-206ENST00000495680 UBE2DNLQ8IWF7 75 aa8.55□□□□□ -1.04
SHROOM1-206ENST00000495680 C1orf158Q8N1D5 194 aa8.55□□□□□ -1.04
SHROOM1-206ENST00000495680 OR4B1Q8NGF8 309 aa8.55□□□□□ -1.04
SHROOM1-206ENST00000495680 OR4C16Q8NGL9 310 aa8.55□□□□□ -1.04
SHROOM1-206ENST00000495680 AP3S1Q92572 193 aa8.55□□□□□ -1.04
SHROOM1-206ENST00000495680 SMIM9A6NGZ8 99 aa8.54□□□□□ -1.04
SHROOM1-206ENST00000495680 CTDSP2O14595 271 aa8.54□□□□□ -1.04
SHROOM1-206ENST00000495680 PRM2P04554 102 aa8.54□□□□□ -1.04
SHROOM1-206ENST00000495680 SMIM18P0DKX4 95 aa8.54□□□□□ -1.04
SHROOM1-206ENST00000495680 SULT1A3P0DMM9 295 aa8.54□□□□□ -1.04
SHROOM1-206ENST00000495680 SULT1A4P0DMN0 295 aa8.54□□□□□ -1.04
SHROOM1-206ENST00000495680 OR2F1Q13607 317 aa8.54□□□□□ -1.04
SHROOM1-206ENST00000495680 KLF9Q13886 244 aaPredicted RBP8.54□□□□□ -1.04
SHROOM1-206ENST00000495680 GAMTQ14353 236 aa8.54□□□□□ -1.04
SHROOM1-206ENST00000495680 FOXI2Q6ZQN5 318 aa8.54□□□□□ -1.04
SHROOM1-206ENST00000495680 C20orf173Q96LM9 149 aa8.54□□□□□ -1.04
SHROOM1-206ENST00000495680 C17orf77Q96MU5 243 aa8.54□□□□□ -1.04
SHROOM1-206ENST00000495680 NIPSNAP3BQ9BS92 247 aa8.54□□□□□ -1.04
SHROOM1-206ENST00000495680 RBKSQ9H477 322 aa8.54□□□□□ -1.04
SHROOM1-206ENST00000495680 YTHDF2Q9Y5A9 579 aaKnown RBP8.54□□□□□ -1.04
SHROOM1-206ENST00000495680 RFNGQ9Y644 331 aa8.54□□□□□ -1.04
SHROOM1-206ENST00000495680 LRP1BQ9NZR2 4599 aa8.53□□□□□ -1.04
SHROOM1-206ENST00000495680 TMEM189A5PLL7 270 aa8.53□□□□□ -1.04
SHROOM1-206ENST00000495680 ZFP92A6NM28 416 aa8.53□□□□□ -1.04
SHROOM1-206ENST00000495680 DISC1C4P0D8 188 aa8.53□□□□□ -1.04
SHROOM1-206ENST00000495680 IFNA21P01568 189 aa8.53□□□□□ -1.04
SHROOM1-206ENST00000495680 PSMB3P49720 205 aa8.53□□□□□ -1.04
SHROOM1-206ENST00000495680 LYZP61626 148 aa8.53□□□□□ -1.04
SHROOM1-206ENST00000495680 SURF2Q15527 256 aaPredicted RBP8.53□□□□□ -1.04
SHROOM1-206ENST00000495680 ZNF79Q15937 498 aa8.53□□□□□ -1.04
SHROOM1-206ENST00000495680 FAM78BQ5VT40 261 aa8.53□□□□□ -1.04
SHROOM1-206ENST00000495680 TMEM88Q6PEY1 159 aa8.53□□□□□ -1.04
SHROOM1-206ENST00000495680 LYZL2Q7Z4W2 148 aa8.53□□□□□ -1.04
SHROOM1-206ENST00000495680 LGI3Q8N145 548 aa8.53□□□□□ -1.04
SHROOM1-206ENST00000495680 OR51S1Q8NGJ8 323 aa8.53□□□□□ -1.04
SHROOM1-206ENST00000495680 COQ8AQ8NI60 647 aa8.53□□□□□ -1.04
SHROOM1-206ENST00000495680 DTD1Q8TEA8 209 aa8.53□□□□□ -1.04
SHROOM1-206ENST00000495680 SMIM4Q8WVI0 70 aa8.53□□□□□ -1.04
SHROOM1-206ENST00000495680 HSPB7Q9UBY9 170 aa8.53□□□□□ -1.04
SHROOM1-206ENST00000495680 LOC102723971A0A1B0GUV8 181 aa8.52□□□□□ -1.05
SHROOM1-206ENST00000495680 SUPT4H1P63272 117 aaKnown RBP8.52□□□□□ -1.05
SHROOM1-206ENST00000495680 SSBP1Q04837 148 aaKnown RBP8.52□□□□□ -1.05
SHROOM1-206ENST00000495680 OR8G2PQ6IF36 304 aa8.52□□□□□ -1.05
SHROOM1-206ENST00000495680 C15orf40Q8WUR7 153 aa8.52□□□□□ -1.05
SHROOM1-206ENST00000495680 IL22RA2Q969J5 263 aa8.52□□□□□ -1.05
SHROOM1-206ENST00000495680 CLUHP3Q96NS8 147 aa8.52□□□□□ -1.05
SHROOM1-206ENST00000495680 U3KQ87 197 aa8.52□□□□□ -1.05
SHROOM1-206ENST00000495680 IGKV1OR2-108A0A075B7D4 117 aa8.51□□□□□ -1.05
SHROOM1-206ENST00000495680 A0A0J9YX75 114 aa8.51□□□□□ -1.05
SHROOM1-206ENST00000495680 RGS5O15539 181 aa8.51□□□□□ -1.05
SHROOM1-206ENST00000495680 AKAIN1P0CW23 69 aa8.51□□□□□ -1.05
SHROOM1-206ENST00000495680 ID1P41134 155 aa8.51□□□□□ -1.05
SHROOM1-206ENST00000495680 CCR6P51684 374 aa8.51□□□□□ -1.05
SHROOM1-206ENST00000495680 PAX9P55771 341 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms