RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 IGHV3OR16-13A0A075B7E8 117 aa9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 IGHV3-74A0A0B4J1X5 117 aa9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 FAM24AA6NFZ4 105 aa9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 FNDC10F2Z333 226 aa9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 CHEK1O14757 476 aa9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 CCNKO75909 580 aa9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 CST7O76096 145 aa9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 CFDP00746 253 aaPredicted RBP9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 CD5P06127 495 aa9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 SULT1A1P50225 295 aa9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 RPL11P62913 178 aaKnown RBP9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 ZNF90Q03938 601 aa9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 SLC38A11Q08AI6 406 aa9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 TMEM144Q7Z5S9 345 aa9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 TMEM61Q8N0U2 210 aa9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 LILRB2Q8N423 598 aa9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 TMEM217Q8N7C4 229 aa9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 WDR89Q96FK6 387 aaPredicted RBP9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 ZNF414Q96IQ9 312 aa9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 PBDC1Q9BVG4 233 aa9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 SLC25A31Q9H0C2 315 aa9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 SMAD5-AS1Q9Y6J3 95 aa9.12□□□□□ -0.95
CSNK1E-213ENST00000495232 IGKV1D-37A0A075B6S9 117 aa9.11□□□□□ -0.95
CSNK1E-213ENST00000495232 IGHV3-66A0A0C4DH42 116 aa9.11□□□□□ -0.95
CSNK1E-213ENST00000495232 HNRNPCP07910 306 aaKnown RBP eCLIP9.11□□□□□ -0.95
CSNK1E-213ENST00000495232 CRYBB3P26998 211 aa9.11□□□□□ -0.95
CSNK1E-213ENST00000495232 S100A11P31949 105 aa9.11□□□□□ -0.95
CSNK1E-213ENST00000495232 NUP62P37198 522 aaPredicted RBP9.11□□□□□ -0.95
CSNK1E-213ENST00000495232 P2RY1P47900 373 aa9.11□□□□□ -0.95
CSNK1E-213ENST00000495232 EIF2B2P49770 351 aaKnown RBP9.11□□□□□ -0.95
CSNK1E-213ENST00000495232 LYZP61626 148 aa9.11□□□□□ -0.95
CSNK1E-213ENST00000495232 PAFAH1B2P68402 229 aa9.11□□□□□ -0.95
CSNK1E-213ENST00000495232 OR2F1Q13607 317 aa9.11□□□□□ -0.95
CSNK1E-213ENST00000495232 TEPPQ6URK8 271 aa9.11□□□□□ -0.95
CSNK1E-213ENST00000495232 TMEM252Q8N6L7 170 aa9.11□□□□□ -0.95
CSNK1E-213ENST00000495232 BPIFCQ8NFQ6 507 aa9.11□□□□□ -0.95
CSNK1E-213ENST00000495232 ST8SIA2Q92186 375 aa9.11□□□□□ -0.95
CSNK1E-213ENST00000495232 RNF125Q96EQ8 232 aa9.11□□□□□ -0.95
CSNK1E-213ENST00000495232 RNF2Q99496 336 aa9.11□□□□□ -0.95
CSNK1E-213ENST00000495232 C11orf1Q9H5F2 150 aa9.11□□□□□ -0.95
CSNK1E-213ENST00000495232 IGKV1OR2-108A0A075B7D4 117 aa9.1□□□□□ -0.95
CSNK1E-213ENST00000495232 ZNF785A8K8V0 405 aa9.1□□□□□ -0.95
CSNK1E-213ENST00000495232 TSPAN4O14817 238 aa9.1□□□□□ -0.95
CSNK1E-213ENST00000495232 MPC2O95563 127 aa9.1□□□□□ -0.95
CSNK1E-213ENST00000495232 APOHP02749 345 aaPredicted RBP9.1□□□□□ -0.95
CSNK1E-213ENST00000495232 S100A7P31151 101 aa9.1□□□□□ -0.95
CSNK1E-213ENST00000495232 CD81P60033 236 aa9.1□□□□□ -0.95
CSNK1E-213ENST00000495232 SELENOTP62341 195 aa9.1□□□□□ -0.95
CSNK1E-213ENST00000495232 ARL16Q0P5N6 197 aa9.1□□□□□ -0.95
CSNK1E-213ENST00000495232 RAB31Q13636 194 aa9.1□□□□□ -0.95
CSNK1E-213ENST00000495232 FCN2Q15485 313 aa9.1□□□□□ -0.95
CSNK1E-213ENST00000495232 USF2Q15853 346 aaPredicted RBP9.1□□□□□ -0.95
CSNK1E-213ENST00000495232 CYP2G1PQ6ZSU1 146 aa9.1□□□□□ -0.95
CSNK1E-213ENST00000495232 TCF24Q7RTU0 167 aa9.1□□□□□ -0.95
CSNK1E-213ENST00000495232 PPP1R14BQ96C90 147 aa9.1□□□□□ -0.95
CSNK1E-213ENST00000495232 SPAG8Q99932 426 aaPredicted RBP9.1□□□□□ -0.95
CSNK1E-213ENST00000495232 VSIRQ9H7M9 311 aa9.1□□□□□ -0.95
CSNK1E-213ENST00000495232 OR5AC2Q9NZP5 309 aa9.1□□□□□ -0.95
CSNK1E-213ENST00000495232 IGKV3-7A0A075B6H7 116 aa9.09□□□□□ -0.95
CSNK1E-213ENST00000495232 IGSF23A1L1A6 192 aa9.09□□□□□ -0.95
CSNK1E-213ENST00000495232 OR4C46A6NHA9 309 aa9.09□□□□□ -0.95
CSNK1E-213ENST00000495232 DNASE2O00115 360 aaPredicted RBP9.09□□□□□ -0.95
CSNK1E-213ENST00000495232 CXCL3P19876 107 aa9.09□□□□□ -0.95
CSNK1E-213ENST00000495232 BAXQ07812 192 aa9.09□□□□□ -0.95
CSNK1E-213ENST00000495232 ATP6V1FQ16864 119 aa9.09□□□□□ -0.95
CSNK1E-213ENST00000495232 OR11H7Q8NGC8 314 aa9.09□□□□□ -0.95
CSNK1E-213ENST00000495232 THAP6Q8TBB0 222 aa9.09□□□□□ -0.95
CSNK1E-213ENST00000495232 ASB13Q8WXK3 278 aa9.09□□□□□ -0.95
CSNK1E-213ENST00000495232 NEURL2Q9BR09 285 aa9.09□□□□□ -0.95
CSNK1E-213ENST00000495232 TUBA4BQ9H853 241 aa9.09□□□□□ -0.95
CSNK1E-213ENST00000495232 UQCC1Q9NVA1 299 aa9.09□□□□□ -0.95
CSNK1E-213ENST00000495232 LSM4Q9Y4Z0 139 aaKnown RBP9.09□□□□□ -0.95
CSNK1E-213ENST00000495232 HELTA6NFD8 242 aa9.08□□□□□ -0.96
CSNK1E-213ENST00000495232 H0YIZ8 118 aa9.08□□□□□ -0.96
CSNK1E-213ENST00000495232 DFFBO76075 338 aa9.08□□□□□ -0.96
CSNK1E-213ENST00000495232 ORM2P19652 201 aa9.08□□□□□ -0.96
CSNK1E-213ENST00000495232 TFPI2P48307 235 aa9.08□□□□□ -0.96
CSNK1E-213ENST00000495232 AP2S1P53680 142 aaPredicted RBP9.08□□□□□ -0.96
CSNK1E-213ENST00000495232 EWSR1Q01844 656 aaKnown RBP eCLIP9.08□□□□□ -0.96
CSNK1E-213ENST00000495232 FGL1Q08830 312 aa9.08□□□□□ -0.96
CSNK1E-213ENST00000495232 S100A7AQ86SG5 101 aa9.08□□□□□ -0.96
CSNK1E-213ENST00000495232 ZNF546Q86UE3 836 aa9.08□□□□□ -0.96
CSNK1E-213ENST00000495232 OR1B1Q8NGR6 318 aa9.08□□□□□ -0.96
CSNK1E-213ENST00000495232 TMEM147Q9BVK8 224 aa9.08□□□□□ -0.96
CSNK1E-213ENST00000495232 PRKDCP78527 4128 aaKnown RBP9.07□□□□□ -0.96
CSNK1E-213ENST00000495232 UBE2L5PA0A1B0GUS4 154 aa9.07□□□□□ -0.96
CSNK1E-213ENST00000495232 OR11H12B2RN74 326 aa9.07□□□□□ -0.96
CSNK1E-213ENST00000495232 CD7P09564 240 aa9.07□□□□□ -0.96
CSNK1E-213ENST00000495232 GATA2P23769 480 aaPredicted RBP9.07□□□□□ -0.96
CSNK1E-213ENST00000495232 NHLH2Q02577 135 aa9.07□□□□□ -0.96
CSNK1E-213ENST00000495232 Q8N1Y9 231 aa9.07□□□□□ -0.96
CSNK1E-213ENST00000495232 GBGT1Q8N5D6 347 aa9.07□□□□□ -0.96
CSNK1E-213ENST00000495232 OR5C1Q8NGR4 320 aa9.07□□□□□ -0.96
CSNK1E-213ENST00000495232 RNF126Q9BV68 326 aa9.07□□□□□ -0.96
CSNK1E-213ENST00000495232 MBD2Q9UBB5 411 aa9.07□□□□□ -0.96
CSNK1E-213ENST00000495232 AGPAT2O15120 278 aa9.06□□□□□ -0.96
CSNK1E-213ENST00000495232 BUB3O43684 328 aa9.06□□□□□ -0.96
CSNK1E-213ENST00000495232 GIPP09681 153 aaPredicted RBP9.06□□□□□ -0.96
CSNK1E-213ENST00000495232 LINC00869P0C866 280 aa9.06□□□□□ -0.96
CSNK1E-213ENST00000495232 IGHV4-30-4P0DP06 118 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms