RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 FAM228BP0C875 321 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 OR12D1P0DN82 309 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 CD36P16671 472 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 SRP14P37108 136 aaKnown RBP1.99□□□□□ -2.09
SMC4-224ENST00000494612 SLCO1A2P46721 670 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 REG1BP48304 166 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 GZMMP51124 257 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 TBPL1P62380 186 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 MYL5Q02045 173 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 AESQ08117 197 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 TMEM267Q0VDI3 215 aaPredicted RBP1.99□□□□□ -2.09
SMC4-224ENST00000494612 TSPAN31Q12999 210 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 JOSD1Q15040 202 aaPredicted RBP1.99□□□□□ -2.09
SMC4-224ENST00000494612 HIST2H3PS2Q5TEC6 136 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 OR10K2Q6IF99 312 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 LCN8Q6JVE9 175 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 NOXRED1Q6NXP6 359 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 Q6ZRU5 148 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 HIST2H3AQ71DI3 136 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 LYZL2Q7Z4W2 148 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 LRRC25Q8N386 305 aaPredicted RBP1.99□□□□□ -2.09
SMC4-224ENST00000494612 Q8NAQ8 132 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 MORN4Q8NDC4 146 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 OR51H1Q8NH63 302 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 C16orf78Q8WTQ4 265 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 EEF1AKMT1Q8WVE0 214 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 KCTD4Q8WVF5 259 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 CMBLQ96DG6 245 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 ACY3Q96HD9 319 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 ABHD14BQ96IU4 210 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 OR7D2Q96RA2 312 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 HIGD2AQ9BW72 106 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 PCBD2Q9H0N5 130 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 PRTFDC1Q9NRG1 225 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 SLC2A9Q9NRM0 540 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 PHLDA3Q9Y5J5 127 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 CMYA5Q8N3K9 4069 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 HEATR5AQ86XA9 2040 aa1.99□□□□□ -2.09
SMC4-224ENST00000494612 HEATR5BQ9P2D3 2071 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 DNAJC13O75165 2243 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 TRBV24-1A0A075B6N3 115 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 hCG_1818297A0A087WSY0 165 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 TRAV8-1A0A0A6YYK1 113 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 A0A1W2PNM2 257 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 C5orf49A4QMS7 147 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 H3BSA7 217 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 APOC4-APOC2K7ER74 178 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 TP53I11O14683 189 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 MRASO14807 208 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 PSCAO43653 123 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 ZNF189O75820 626 aaPredicted RBP1.98□□□□□ -2.09
SMC4-224ENST00000494612 LTAP01374 205 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 APOC2P02655 101 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 CRHP06850 196 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 HIST1H1EP10412 219 aaKnown RBP1.98□□□□□ -2.09
SMC4-224ENST00000494612 SLC25A16P16260 332 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 RPS3P23396 243 aaKnown RBP eCLIP1.98□□□□□ -2.09
SMC4-224ENST00000494612 OMPP47874 163 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 OR1E2P47887 323 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 CDK9P50750 372 aaKnown RBP1.98□□□□□ -2.09
SMC4-224ENST00000494612 KRTAP12-3P60328 96 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 HERVK_113P63121 156 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 BTN3A2P78410 334 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 APOFQ13790 326 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 MMDQ15546 238 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 ZNF791Q3KP31 576 aaPredicted RBP1.98□□□□□ -2.09
SMC4-224ENST00000494612 ACSBG2Q5FVE4 666 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 TMPPEQ6ZT21 453 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 SCXQ7RTU7 201 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 KRTCAP2Q8N6L1 136 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 OR51D1Q8NGF3 324 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 HIST1H2BAQ96A08 127 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 PYURFQ96I23 114 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 OR8B2Q96RD0 313 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 GNB1LQ9BYB4 327 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 ALX4Q9H161 411 aaPredicted RBP1.98□□□□□ -2.09
SMC4-224ENST00000494612 HES4Q9HCC6 221 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 FAIMQ9NVQ4 179 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 MRPL16Q9NX20 251 aaKnown RBP1.98□□□□□ -2.09
SMC4-224ENST00000494612 WASHC3Q9Y3C0 194 aa1.98□□□□□ -2.09
SMC4-224ENST00000494612 CHCHD2Q9Y6H1 151 aaPredicted RBP1.98□□□□□ -2.09
SMC4-224ENST00000494612 RYR3Q15413 4870 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 A0A1W2PQL4 384 aaPredicted RBP1.97□□□□□ -2.09
SMC4-224ENST00000494612 SH2D1AO60880 128 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 DEDDO75618 318 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 CDS2O95674 445 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 C8GP07360 202 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 MPC1LP0DKB6 136 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 MYL12AP19105 171 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 RPL22P35268 128 aaKnown RBP1.97□□□□□ -2.09
SMC4-224ENST00000494612 CTBP2P56545 445 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 HLA-DRB3P79483 266 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 SPA17Q15506 151 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 LRRC75BQ2VPJ9 315 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 AGTRAPQ6RW13 159 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 SBSNQ6UWP8 590 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 OR10D4PQ8NGN7 298 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 OR5C1Q8NGR4 320 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 Q8WTZ3 238 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 ASB17Q8WXJ9 295 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms