RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 SSX3Q99909 188 aa12.98□□□□□ -0.33
ATG4B-225ENST00000494465 S4R3C0 116 aa12.98□□□□□ -0.33
ATG4B-225ENST00000494465 NBPF19A0A087WUL8 3843 aa12.98□□□□□ -0.33
ATG4B-225ENST00000494465 A0A1W2PRE2 83 aa12.98□□□□□ -0.33
ATG4B-225ENST00000494465 AMY1AP04745 511 aa12.98□□□□□ -0.33
ATG4B-225ENST00000494465 ELOBQ15370 118 aa12.98□□□□□ -0.33
ATG4B-225ENST00000494465 FXYD5Q96DB9 178 aa12.98□□□□□ -0.33
ATG4B-225ENST00000494465 PAXXQ9BUH6 204 aa12.98□□□□□ -0.33
ATG4B-225ENST00000494465 OR51M1Q9H341 326 aa12.98□□□□□ -0.33
ATG4B-225ENST00000494465 NDUFB8O95169 186 aa12.97□□□□□ -0.33
ATG4B-225ENST00000494465 GATA3P23771 443 aa12.97□□□□□ -0.33
ATG4B-225ENST00000494465 SMUG1Q53HV7 270 aa12.97□□□□□ -0.33
ATG4B-225ENST00000494465 LINC01551Q86U37 167 aa12.97□□□□□ -0.33
ATG4B-225ENST00000494465 ZNF48Q96MX3 618 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-225ENST00000494465 KLK9Q2XQG4 91 aa12.96□□□□□ -0.33
ATG4B-225ENST00000494465 LINC01356Q8N9X3 169 aa12.96□□□□□ -0.33
ATG4B-225ENST00000494465 Q8WTZ3 238 aa12.96□□□□□ -0.33
ATG4B-225ENST00000494465 KLK9Q9UKQ9 250 aa12.96□□□□□ -0.33
ATG4B-225ENST00000494465 CR1P17927 2039 aa12.96□□□□□ -0.33
ATG4B-225ENST00000494465 PGPEP1LA6NFU8 196 aa12.96□□□□□ -0.33
ATG4B-225ENST00000494465 RD3LP0DJH9 198 aa12.96□□□□□ -0.33
ATG4B-225ENST00000494465 RAB5AP20339 215 aa12.96□□□□□ -0.33
ATG4B-225ENST00000494465 FAM110DQ8TAY7 271 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-225ENST00000494465 CTDSP1Q9GZU7 261 aa12.96□□□□□ -0.33
ATG4B-225ENST00000494465 MOB4Q9Y3A3 225 aa12.96□□□□□ -0.33
ATG4B-225ENST00000494465 OR2J3O76001 311 aa12.95□□□□□ -0.34
ATG4B-225ENST00000494465 LYZP61626 148 aa12.95□□□□□ -0.34
ATG4B-225ENST00000494465 BEX4Q9NWD9 120 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-225ENST00000494465 MRPL27Q9P0M9 148 aaKnown RBP12.95□□□□□ -0.34
ATG4B-225ENST00000494465 URGCP-MRPS24S4R325 110 aa12.95□□□□□ -0.34
ATG4B-225ENST00000494465 APCP25054 2843 aa12.95□□□□□ -0.34
ATG4B-225ENST00000494465 CLDN34H7C241 214 aa12.95□□□□□ -0.34
ATG4B-225ENST00000494465 TOMM40O96008 361 aa12.95□□□□□ -0.34
ATG4B-225ENST00000494465 CXCL1P09341 107 aa12.95□□□□□ -0.34
ATG4B-225ENST00000494465 MFAP4P55083 255 aa12.95□□□□□ -0.34
ATG4B-225ENST00000494465 DEFB113Q30KQ7 82 aa12.95□□□□□ -0.34
ATG4B-225ENST00000494465 UNQ5815/PRO19632Q6UWF5 114 aa12.95□□□□□ -0.34
ATG4B-225ENST00000494465 MAPK1IP1LQ8NDC0 245 aa12.95□□□□□ -0.34
ATG4B-225ENST00000494465 TMUB1Q9BVT8 246 aa12.95□□□□□ -0.34
ATG4B-225ENST00000494465 AURKAIP1Q9NWT8 199 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-225ENST00000494465 ZANQ9Y493 2812 aa12.95□□□□□ -0.34
ATG4B-225ENST00000494465 CRYBB3P26998 211 aa12.94□□□□□ -0.34
ATG4B-225ENST00000494465 SUMO1P63165 101 aaKnown RBP12.94□□□□□ -0.34
ATG4B-225ENST00000494465 LOXL1Q08397 574 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-225ENST00000494465 ECSCRQ19T08 205 aa12.94□□□□□ -0.34
ATG4B-225ENST00000494465 C16orf82Q7Z2V1 217 aa12.94□□□□□ -0.34
ATG4B-225ENST00000494465 ELOVL1Q9BW60 279 aa12.94□□□□□ -0.34
ATG4B-225ENST00000494465 C21orf62Q9NYP8 219 aa12.94□□□□□ -0.34
ATG4B-225ENST00000494465 THYN1Q9P016 225 aa12.94□□□□□ -0.34
ATG4B-225ENST00000494465 HIGD1AQ9Y241 93 aa12.94□□□□□ -0.34
ATG4B-225ENST00000494465 DOPEY2Q9Y3R5 2298 aa12.94□□□□□ -0.34
ATG4B-225ENST00000494465 G3V318 75 aa12.94□□□□□ -0.34
ATG4B-225ENST00000494465 GP9P14770 177 aa12.94□□□□□ -0.34
ATG4B-225ENST00000494465 LEMD1Q68G75 181 aa12.94□□□□□ -0.34
ATG4B-225ENST00000494465 ZNF491Q8N8L2 437 aa12.94□□□□□ -0.34
ATG4B-225ENST00000494465 STXBP6Q8NFX7 210 aa12.94□□□□□ -0.34
ATG4B-225ENST00000494465 C2CD4CQ8TF44 421 aa12.94□□□□□ -0.34
ATG4B-225ENST00000494465 NAV2Q8IVL1 2488 aa12.94□□□□□ -0.34
ATG4B-225ENST00000494465 CSPG4Q6UVK1 2322 aa12.94□□□□□ -0.34
ATG4B-225ENST00000494465 TRAV30A0A087WSZ9 112 aa12.93□□□□□ -0.34
ATG4B-225ENST00000494465 GNG7O60262 68 aa12.93□□□□□ -0.34
ATG4B-225ENST00000494465 PLA2G2AP14555 144 aa12.93□□□□□ -0.34
ATG4B-225ENST00000494465 RPL35P42766 123 aaKnown RBP12.93□□□□□ -0.34
ATG4B-225ENST00000494465 YPEL3P61236 119 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-225ENST00000494465 LRRC75A-AS1Q8N1F1 130 aa12.93□□□□□ -0.34
ATG4B-225ENST00000494465 SLC25A39Q9BZJ4 359 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-225ENST00000494465 MLXQ9UH92 298 aa12.93□□□□□ -0.34
ATG4B-225ENST00000494465 FBXL7Q9UJT9 491 aa12.93□□□□□ -0.34
ATG4B-225ENST00000494465 PRELID1Q9Y255 219 aa12.93□□□□□ -0.34
ATG4B-225ENST00000494465 TGIF2-C20orf24A0A0A6YYL0 155 aa12.93□□□□□ -0.34
ATG4B-225ENST00000494465 TRBV9A0A0B4J1U6 114 aa12.93□□□□□ -0.34
ATG4B-225ENST00000494465 WI2-2373I1.2A0A1W2PRP0 233 aa12.93□□□□□ -0.34
ATG4B-225ENST00000494465 RNF223E7ERA6 249 aa12.93□□□□□ -0.34
ATG4B-225ENST00000494465 FABP1P07148 127 aa12.93□□□□□ -0.34
ATG4B-225ENST00000494465 SNRPCP09234 159 aaKnown RBP12.93□□□□□ -0.34
ATG4B-225ENST00000494465 MYCNOSP40205 109 aa12.93□□□□□ -0.34
ATG4B-225ENST00000494465 A6NDX4 124 aa12.92□□□□□ -0.34
ATG4B-225ENST00000494465 IGHV3-23P01764 117 aa12.92□□□□□ -0.34
ATG4B-225ENST00000494465 FCGR2BP31994 310 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-225ENST00000494465 FLI1Q01543 452 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-225ENST00000494465 C19orf54Q5BKX5 351 aa12.92□□□□□ -0.34
ATG4B-225ENST00000494465 OCC1Q8TAD7 63 aa12.92□□□□□ -0.34
ATG4B-225ENST00000494465 C9JCJ5 164 aa12.92□□□□□ -0.34
ATG4B-225ENST00000494465 H3BUX3 64 aa12.92□□□□□ -0.34
ATG4B-225ENST00000494465 HIST1H1BP16401 226 aaKnown RBP12.92□□□□□ -0.34
ATG4B-225ENST00000494465 ZNF329Q86UD4 541 aa12.92□□□□□ -0.34
ATG4B-225ENST00000494465 TMEM68Q96MH6 324 aa12.92□□□□□ -0.34
ATG4B-225ENST00000494465 Q56UQ5 140 aa12.91□□□□□ -0.34
ATG4B-225ENST00000494465 RNF125Q96EQ8 232 aa12.91□□□□□ -0.34
ATG4B-225ENST00000494465 K7EN84 100 aa12.91□□□□□ -0.34
ATG4B-225ENST00000494465 IL4P05112 153 aa12.91□□□□□ -0.34
ATG4B-225ENST00000494465 PFN1P07737 140 aaKnown RBP12.91□□□□□ -0.34
ATG4B-225ENST00000494465 CTSGP08311 255 aa12.91□□□□□ -0.34
ATG4B-225ENST00000494465 CRIP2P52943 208 aaPredicted RBP12.91□□□□□ -0.34
ATG4B-225ENST00000494465 LY6EQ16553 131 aa12.91□□□□□ -0.34
ATG4B-225ENST00000494465 Q5PR19 223 aa12.91□□□□□ -0.34
ATG4B-225ENST00000494465 BCL6BQ8N143 479 aaPredicted RBP12.91□□□□□ -0.34
ATG4B-225ENST00000494465 VN1R17PQ8TDU5 208 aa12.91□□□□□ -0.34
ATG4B-225ENST00000494465 ANAPC16Q96DE5 110 aa12.91□□□□□ -0.34
ATG4B-225ENST00000494465 ZNF414Q96IQ9 312 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 271.8 ms