RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 RCL1Q9Y2P8 373 aaKnown RBP6.55□□□□□ -1.36
ITGB1-217ENST00000494395 IGKV1OR2-108A0A075B7D4 117 aa6.54□□□□□ -1.36
ITGB1-217ENST00000494395 IGHV3-49A0A0A0MS15 119 aa6.54□□□□□ -1.36
ITGB1-217ENST00000494395 TRAV14DV4A0A0A6YYC5 116 aa6.54□□□□□ -1.36
ITGB1-217ENST00000494395 NPIPB6E9PJ23 425 aa6.54□□□□□ -1.36
ITGB1-217ENST00000494395 YIF1AO95070 293 aa6.54□□□□□ -1.36
ITGB1-217ENST00000494395 MBPP02686 304 aaPredicted RBP6.54□□□□□ -1.36
ITGB1-217ENST00000494395 APOHP02749 345 aaPredicted RBP6.54□□□□□ -1.36
ITGB1-217ENST00000494395 IFNA4P05014 189 aa6.54□□□□□ -1.36
ITGB1-217ENST00000494395 CRYBB3P26998 211 aa6.54□□□□□ -1.36
ITGB1-217ENST00000494395 CD81P60033 236 aa6.54□□□□□ -1.36
ITGB1-217ENST00000494395 IL15RAQ13261 267 aa6.54□□□□□ -1.36
ITGB1-217ENST00000494395 GUCA2BQ16661 112 aa6.54□□□□□ -1.36
ITGB1-217ENST00000494395 NRARPQ7Z6K4 114 aa6.54□□□□□ -1.36
ITGB1-217ENST00000494395 C12orf45Q8N5I9 185 aaPredicted RBP6.54□□□□□ -1.36
ITGB1-217ENST00000494395 ST8SIA2Q92186 375 aa6.54□□□□□ -1.36
ITGB1-217ENST00000494395 SPAG8Q99932 426 aaPredicted RBP6.54□□□□□ -1.36
ITGB1-217ENST00000494395 GINS3Q9BRX5 216 aa6.54□□□□□ -1.36
ITGB1-217ENST00000494395 MARVELD1Q9BSK0 173 aa6.54□□□□□ -1.36
ITGB1-217ENST00000494395 RHPN1-AS1Q9BWJ2 59 aa6.54□□□□□ -1.36
ITGB1-217ENST00000494395 C11orf1Q9H5F2 150 aa6.54□□□□□ -1.36
ITGB1-217ENST00000494395 HUWE1Q7Z6Z7 4374 aaKnown RBP6.54□□□□□ -1.36
ITGB1-217ENST00000494395 IGHV3OR16-13A0A075B7E8 117 aa6.53□□□□□ -1.36
ITGB1-217ENST00000494395 IGHV3-74A0A0B4J1X5 117 aa6.53□□□□□ -1.36
ITGB1-217ENST00000494395 H3BP45 60 aa6.53□□□□□ -1.36
ITGB1-217ENST00000494395 SCGB2A1O75556 95 aa6.53□□□□□ -1.36
ITGB1-217ENST00000494395 CCNKO75909 580 aa6.53□□□□□ -1.36
ITGB1-217ENST00000494395 TOMM40O96008 361 aa6.53□□□□□ -1.36
ITGB1-217ENST00000494395 NHLRC4P0CG21 123 aaPredicted RBP6.53□□□□□ -1.36
ITGB1-217ENST00000494395 TAS2R30P59541 319 aa6.53□□□□□ -1.36
ITGB1-217ENST00000494395 RAB11AP62491 216 aa6.53□□□□□ -1.36
ITGB1-217ENST00000494395 USF2Q15853 346 aaPredicted RBP6.53□□□□□ -1.36
ITGB1-217ENST00000494395 ODF3L2Q3SX64 289 aa6.53□□□□□ -1.36
ITGB1-217ENST00000494395 SPANXN5Q5MJ07 72 aa6.53□□□□□ -1.36
ITGB1-217ENST00000494395 TMEM14EPQ6UXP3 125 aa6.53□□□□□ -1.36
ITGB1-217ENST00000494395 DEFB125Q8N687 156 aa6.53□□□□□ -1.36
ITGB1-217ENST00000494395 THAP8Q8NA92 274 aa6.53□□□□□ -1.36
ITGB1-217ENST00000494395 ENKURQ8TC29 256 aa6.53□□□□□ -1.36
ITGB1-217ENST00000494395 ACY3Q96HD9 319 aa6.53□□□□□ -1.36
ITGB1-217ENST00000494395 SMIM8Q96KF7 97 aa6.53□□□□□ -1.36
ITGB1-217ENST00000494395 ASCL2Q99929 193 aa6.53□□□□□ -1.36
ITGB1-217ENST00000494395 TM2D3Q9BRN9 247 aa6.53□□□□□ -1.36
ITGB1-217ENST00000494395 STRAPQ9Y3F4 350 aaKnown RBP6.53□□□□□ -1.36
ITGB1-217ENST00000494395 RBMY1BA6NDE4 496 aaKnown RBP6.52□□□□□ -1.37
ITGB1-217ENST00000494395 RBMY1EA6NEQ0 496 aaKnown RBP6.52□□□□□ -1.37
ITGB1-217ENST00000494395 OR11H12B2RN74 326 aa6.52□□□□□ -1.37
ITGB1-217ENST00000494395 SSSCA1O60232 199 aa6.52□□□□□ -1.37
ITGB1-217ENST00000494395 RBMY1DP0C7P1 496 aaKnown RBP6.52□□□□□ -1.37
ITGB1-217ENST00000494395 NPPCP23582 126 aa6.52□□□□□ -1.37
ITGB1-217ENST00000494395 RPP30P78346 268 aaKnown RBP6.52□□□□□ -1.37
ITGB1-217ENST00000494395 RBPMS2Q6ZRY4 209 aaKnown RBP6.52□□□□□ -1.37
ITGB1-217ENST00000494395 SLC35E1Q96K37 410 aa6.52□□□□□ -1.37
ITGB1-217ENST00000494395 C2orf50Q96LR7 162 aa6.52□□□□□ -1.37
ITGB1-217ENST00000494395 RAB40CQ96S21 281 aa6.52□□□□□ -1.37
ITGB1-217ENST00000494395 TRGV9Q99603 122 aa6.52□□□□□ -1.37
ITGB1-217ENST00000494395 FAM110AQ9BQ89 295 aa6.52□□□□□ -1.37
ITGB1-217ENST00000494395 PSENENQ9NZ42 101 aa6.52□□□□□ -1.37
ITGB1-217ENST00000494395 C7orf66A4D0T2 115 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 SNRPGP15A8MWD9 76 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 INMT-MINDY4F8WBC2 141 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 K7EPK0 472 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 PRAF2O60831 178 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 TSC22D2O75157 780 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 IL4P05112 153 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 CD5P06127 495 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 HNRNPCP07910 306 aaKnown RBP eCLIP6.51□□□□□ -1.37
ITGB1-217ENST00000494395 RD3LP0DJH9 198 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 PSG1P11464 419 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 DEFA1P59665 94 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 DEFA3P59666 94 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 ZNF90Q03938 601 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 HAGHQ16775 308 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 RNF151Q2KHN1 245 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 LAMTOR1Q6IAA8 161 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 ACOT7LQ6ZUV0 252 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 TCF24Q7RTU0 167 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 Q8WTZ3 238 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 GLMPQ8WWB7 406 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 METTL26Q96S19 204 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 SRD5A3Q9H8P0 318 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 GSKIPQ9P0R6 139 aa6.51□□□□□ -1.37
ITGB1-217ENST00000494395 TENM3Q9P273 2699 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 TRAV2A0A0B4J234 112 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 IGHV3-66A0A0C4DH42 116 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 C5orf51A6NDU8 294 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 OR4C46A6NHA9 309 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 ZFP92A6NM28 416 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 FNDC10F2Z333 226 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 BUB3O43684 328 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 DFFBO76075 338 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 GYPEP15421 78 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 BMI1P35226 326 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 P2RY1P47900 373 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 DLK1P80370 383 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 ARL16Q0P5N6 197 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 OR8G2PQ6IF36 304 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 C16orf54Q6UWD8 224 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 GSG1LQ6UXU4 331 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 TMEM144Q7Z5S9 345 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 OR51G1Q8NGK1 321 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms