RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 NUDT15Q9NV35 164 aa10.87□□□□□ -0.67
ATG4B-224ENST00000494132 IGKV1OR2-108A0A075B7D4 117 aa10.86□□□□□ -0.67
ATG4B-224ENST00000494132 LYL1P12980 280 aa10.86□□□□□ -0.67
ATG4B-224ENST00000494132 GPX4P36969 197 aaPredicted RBP10.86□□□□□ -0.67
ATG4B-224ENST00000494132 IAH1Q2TAA2 248 aaPredicted RBP10.86□□□□□ -0.67
ATG4B-224ENST00000494132 GSG1LQ6UXU4 331 aa10.86□□□□□ -0.67
ATG4B-224ENST00000494132 MITD1Q8WV92 249 aa10.86□□□□□ -0.67
ATG4B-224ENST00000494132 RNF125Q96EQ8 232 aa10.86□□□□□ -0.67
ATG4B-224ENST00000494132 GRAMD2BQ96HH9 432 aa10.86□□□□□ -0.67
ATG4B-224ENST00000494132 GSKIPQ9P0R6 139 aa10.86□□□□□ -0.67
ATG4B-224ENST00000494132 TBC1D24Q9ULP9 559 aa10.86□□□□□ -0.67
ATG4B-224ENST00000494132 U3KQE9 123 aa10.86□□□□□ -0.67
ATG4B-224ENST00000494132 PRSS46E5RG02 174 aa10.85□□□□□ -0.67
ATG4B-224ENST00000494132 CCNKO75909 580 aa10.85□□□□□ -0.67
ATG4B-224ENST00000494132 CD5P06127 495 aa10.85□□□□□ -0.67
ATG4B-224ENST00000494132 ZNF688P0C7X2 276 aa10.85□□□□□ -0.67
ATG4B-224ENST00000494132 APOC4P55056 127 aa10.85□□□□□ -0.67
ATG4B-224ENST00000494132 ATP5IP56385 69 aaPredicted RBP10.85□□□□□ -0.67
ATG4B-224ENST00000494132 LYZP61626 148 aa10.85□□□□□ -0.67
ATG4B-224ENST00000494132 ID3Q02535 119 aa10.85□□□□□ -0.67
ATG4B-224ENST00000494132 C16orf54Q6UWD8 224 aa10.85□□□□□ -0.67
ATG4B-224ENST00000494132 ZBTB8BQ8NAP8 495 aaPredicted RBP10.85□□□□□ -0.67
ATG4B-224ENST00000494132 GLMPQ8WWB7 406 aa10.85□□□□□ -0.67
ATG4B-224ENST00000494132 S100ZQ8WXG8 99 aa10.85□□□□□ -0.67
ATG4B-224ENST00000494132 PSENENQ9NZ42 101 aa10.85□□□□□ -0.67
ATG4B-224ENST00000494132 STRAPQ9Y3F4 350 aaKnown RBP10.85□□□□□ -0.67
ATG4B-224ENST00000494132 FAM25EA8MYX2 175 aa10.84□□□□□ -0.67
ATG4B-224ENST00000494132 K7EQG2 157 aa10.84□□□□□ -0.67
ATG4B-224ENST00000494132 H2AFB2P0C5Z0 115 aa10.84□□□□□ -0.67
ATG4B-224ENST00000494132 RPP30P78346 268 aaKnown RBP10.84□□□□□ -0.67
ATG4B-224ENST00000494132 OR8G2PQ6IF36 304 aa10.84□□□□□ -0.67
ATG4B-224ENST00000494132 ACOT7LQ6ZUV0 252 aa10.84□□□□□ -0.67
ATG4B-224ENST00000494132 STPG3Q8N7X2 389 aa10.84□□□□□ -0.67
ATG4B-224ENST00000494132 STARD9Q9P2P6 4700 aa10.83□□□□□ -0.68
ATG4B-224ENST00000494132 FAM240BA0A1B0GVZ2 78 aa10.83□□□□□ -0.68
ATG4B-224ENST00000494132 SMCO3A2RU48 225 aa10.83□□□□□ -0.68
ATG4B-224ENST00000494132 BUB3O43684 328 aa10.83□□□□□ -0.68
ATG4B-224ENST00000494132 GATA2P23769 480 aaPredicted RBP10.83□□□□□ -0.68
ATG4B-224ENST00000494132 PAX9P55771 341 aa10.83□□□□□ -0.68
ATG4B-224ENST00000494132 RRAS2P62070 204 aaPredicted RBP10.83□□□□□ -0.68
ATG4B-224ENST00000494132 AKR1C1Q04828 323 aa10.83□□□□□ -0.68
ATG4B-224ENST00000494132 DCANP1Q8TF63 244 aa10.83□□□□□ -0.68
ATG4B-224ENST00000494132 PTTG2Q9NZH5 202 aa10.83□□□□□ -0.68
ATG4B-224ENST00000494132 SPRY2O43597 315 aa10.82□□□□□ -0.68
ATG4B-224ENST00000494132 EIF2B2P49770 351 aaKnown RBP10.82□□□□□ -0.68
ATG4B-224ENST00000494132 CMC4P56277 68 aaPredicted RBP10.82□□□□□ -0.68
ATG4B-224ENST00000494132 IFITM3Q01628 133 aa10.82□□□□□ -0.68
ATG4B-224ENST00000494132 SIGLEC15Q6ZMC9 328 aa10.82□□□□□ -0.68
ATG4B-224ENST00000494132 TMEM182Q6ZP80 229 aaPredicted RBP10.82□□□□□ -0.68
ATG4B-224ENST00000494132 LINC00299Q6ZSB3 139 aa10.82□□□□□ -0.68
ATG4B-224ENST00000494132 THAP8Q8NA92 274 aa10.82□□□□□ -0.68
ATG4B-224ENST00000494132 ZNF431Q8TF32 576 aaPredicted RBP10.82□□□□□ -0.68
ATG4B-224ENST00000494132 TRGV9Q99603 122 aa10.82□□□□□ -0.68
ATG4B-224ENST00000494132 RCL1Q9Y2P8 373 aaKnown RBP10.82□□□□□ -0.68
ATG4B-224ENST00000494132 TRAV2A0A0B4J234 112 aa10.81□□□□□ -0.68
ATG4B-224ENST00000494132 KIR2DL5BA0A0G2JN68 375 aa10.81□□□□□ -0.68
ATG4B-224ENST00000494132 KIR2DL5BA0A0G2JPC4 375 aa10.81□□□□□ -0.68
ATG4B-224ENST00000494132 HELTA6NFD8 242 aa10.81□□□□□ -0.68
ATG4B-224ENST00000494132 KNCNA6PVL3 124 aa10.81□□□□□ -0.68
ATG4B-224ENST00000494132 PMS2P5A8MQ11 134 aa10.81□□□□□ -0.68
ATG4B-224ENST00000494132 METTL15P1P0C7V9 234 aa10.81□□□□□ -0.68
ATG4B-224ENST00000494132 ASAH1Q13510 395 aa10.81□□□□□ -0.68
ATG4B-224ENST00000494132 ZNF846Q147U1 533 aa10.81□□□□□ -0.68
ATG4B-224ENST00000494132 MZT2BQ6NZ67 158 aa10.81□□□□□ -0.68
ATG4B-224ENST00000494132 Q6ZWC4 215 aa10.81□□□□□ -0.68
ATG4B-224ENST00000494132 KIR2DL5AQ8N109 375 aa10.81□□□□□ -0.68
ATG4B-224ENST00000494132 C12orf45Q8N5I9 185 aaPredicted RBP10.81□□□□□ -0.68
ATG4B-224ENST00000494132 KIR2DL5BQ8NHK3 375 aa10.81□□□□□ -0.68
ATG4B-224ENST00000494132 WDR12Q9GZL7 423 aaKnown RBP10.81□□□□□ -0.68
ATG4B-224ENST00000494132 LSM5Q9Y4Y9 91 aaKnown RBP10.81□□□□□ -0.68
ATG4B-224ENST00000494132 A0A0J9YWU9 116 aa10.8□□□□□ -0.68
ATG4B-224ENST00000494132 C5orf51A6NDU8 294 aa10.8□□□□□ -0.68
ATG4B-224ENST00000494132 SNRPGP15A8MWD9 76 aa10.8□□□□□ -0.68
ATG4B-224ENST00000494132 UBE2CO00762 179 aa10.8□□□□□ -0.68
ATG4B-224ENST00000494132 UPK1BO75841 260 aa10.8□□□□□ -0.68
ATG4B-224ENST00000494132 MBPP02686 304 aaPredicted RBP10.8□□□□□ -0.68
ATG4B-224ENST00000494132 EWSR1Q01844 656 aaKnown RBP eCLIP10.8□□□□□ -0.68
ATG4B-224ENST00000494132 PSMG4Q5JS54 123 aa10.8□□□□□ -0.68
ATG4B-224ENST00000494132 PPP1R14BQ96C90 147 aa10.8□□□□□ -0.68
ATG4B-224ENST00000494132 RNF183Q96D59 192 aa10.8□□□□□ -0.68
ATG4B-224ENST00000494132 SMIM8Q96KF7 97 aa10.8□□□□□ -0.68
ATG4B-224ENST00000494132 CSTL1Q9H114 145 aa10.8□□□□□ -0.68
ATG4B-224ENST00000494132 CSMD3Q7Z407 3707 aa10.79□□□□□ -0.68
ATG4B-224ENST00000494132 CA1P00915 261 aaPredicted RBP10.79□□□□□ -0.68
ATG4B-224ENST00000494132 FABP1P07148 127 aa10.79□□□□□ -0.68
ATG4B-224ENST00000494132 DEFB1P60022 68 aa10.79□□□□□ -0.68
ATG4B-224ENST00000494132 ACTL10Q5JWF8 245 aa10.79□□□□□ -0.68
ATG4B-224ENST00000494132 TMEM14EPQ6UXP3 125 aa10.79□□□□□ -0.68
ATG4B-224ENST00000494132 STHQ8IWL8 128 aa10.79□□□□□ -0.68
ATG4B-224ENST00000494132 ENKURQ8TC29 256 aa10.79□□□□□ -0.68
ATG4B-224ENST00000494132 NRN1Q9NPD7 142 aa10.79□□□□□ -0.68
ATG4B-224ENST00000494132 DOK5Q9P104 306 aa10.79□□□□□ -0.68
ATG4B-224ENST00000494132 C7orf66A4D0T2 115 aa10.78□□□□□ -0.68
ATG4B-224ENST00000494132 ORM2P19652 201 aa10.78□□□□□ -0.68
ATG4B-224ENST00000494132 AP2S1P53680 142 aaPredicted RBP10.78□□□□□ -0.68
ATG4B-224ENST00000494132 ARL16Q0P5N6 197 aa10.78□□□□□ -0.68
ATG4B-224ENST00000494132 OR1B1Q8NGR6 318 aa10.78□□□□□ -0.68
ATG4B-224ENST00000494132 RAB40CQ96S21 281 aa10.78□□□□□ -0.68
ATG4B-224ENST00000494132 SLC25A22Q9H936 323 aa10.78□□□□□ -0.68
ATG4B-224ENST00000494132 TP53TG1Q9Y2A0 90 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms