RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ZFAND3Q9H8U3 227 aa11.09□□□□□ -0.63
BRCA1-223ENST00000494123 TMEM213A2RRL7 107 aa11.09□□□□□ -0.63
BRCA1-223ENST00000494123 C2orf70A6NJV1 201 aa11.09□□□□□ -0.63
BRCA1-223ENST00000494123 K7EMT4 169 aa11.09□□□□□ -0.63
BRCA1-223ENST00000494123 FGF7P21781 194 aa11.09□□□□□ -0.63
BRCA1-223ENST00000494123 SELENOTP62341 195 aa11.09□□□□□ -0.63
BRCA1-223ENST00000494123 BTNL8Q6UX41 500 aa11.09□□□□□ -0.63
BRCA1-223ENST00000494123 TCTE3Q8IZS6 198 aa11.09□□□□□ -0.63
BRCA1-223ENST00000494123 ZNF414Q96IQ9 312 aa11.09□□□□□ -0.63
BRCA1-223ENST00000494123 PBDC1Q9BVG4 233 aa11.09□□□□□ -0.63
BRCA1-223ENST00000494123 WDR83OSQ9Y284 106 aa11.09□□□□□ -0.63
BRCA1-223ENST00000494123 LSM4Q9Y4Z0 139 aaKnown RBP11.09□□□□□ -0.63
BRCA1-223ENST00000494123 AGPAT2O15120 278 aa11.08□□□□□ -0.64
BRCA1-223ENST00000494123 MPDU1O75352 247 aa11.08□□□□□ -0.64
BRCA1-223ENST00000494123 CFDP00746 253 aaPredicted RBP11.08□□□□□ -0.64
BRCA1-223ENST00000494123 IFNA5P01569 189 aa11.08□□□□□ -0.64
BRCA1-223ENST00000494123 CSN3P07498 182 aa11.08□□□□□ -0.64
BRCA1-223ENST00000494123 FOLR2P14207 255 aa11.08□□□□□ -0.64
BRCA1-223ENST00000494123 CAMLGP49069 296 aa11.08□□□□□ -0.64
BRCA1-223ENST00000494123 INSL3P51460 131 aa11.08□□□□□ -0.64
BRCA1-223ENST00000494123 LYZP61626 148 aa11.08□□□□□ -0.64
BRCA1-223ENST00000494123 DYNLRB2Q8TF09 96 aa11.08□□□□□ -0.64
BRCA1-223ENST00000494123 MARC2Q969Z3 335 aa11.08□□□□□ -0.64
BRCA1-223ENST00000494123 RNF125Q96EQ8 232 aa11.08□□□□□ -0.64
BRCA1-223ENST00000494123 METTL26Q96S19 204 aa11.08□□□□□ -0.64
BRCA1-223ENST00000494123 MGST2Q99735 147 aa11.08□□□□□ -0.64
BRCA1-223ENST00000494123 MFFQ9GZY8 342 aa11.08□□□□□ -0.64
BRCA1-223ENST00000494123 MRPL27Q9P0M9 148 aaKnown RBP11.08□□□□□ -0.64
BRCA1-223ENST00000494123 FBXL17Q9UF56 701 aa11.08□□□□□ -0.64
BRCA1-223ENST00000494123 RNF222A6NCQ9 220 aa11.07□□□□□ -0.64
BRCA1-223ENST00000494123 CBLN1P23435 193 aa11.07□□□□□ -0.64
BRCA1-223ENST00000494123 GATA2P23769 480 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-223ENST00000494123 IL34Q6ZMJ4 242 aa11.07□□□□□ -0.64
BRCA1-223ENST00000494123 NARS2Q96I59 477 aaKnown RBP11.07□□□□□ -0.64
BRCA1-223ENST00000494123 EDN2P20800 178 aa11.06□□□□□ -0.64
BRCA1-223ENST00000494123 NPPCP23582 126 aa11.06□□□□□ -0.64
BRCA1-223ENST00000494123 BMI1P35226 326 aa11.06□□□□□ -0.64
BRCA1-223ENST00000494123 USF2Q15853 346 aaPredicted RBP11.06□□□□□ -0.64
BRCA1-223ENST00000494123 OXLD1Q5BKU9 147 aa11.06□□□□□ -0.64
BRCA1-223ENST00000494123 SCGB1C1Q8TD33 95 aa11.06□□□□□ -0.64
BRCA1-223ENST00000494123 SIGLEC8Q9NYZ4 499 aa11.06□□□□□ -0.64
BRCA1-223ENST00000494123 RABAC1Q9UI14 185 aa11.06□□□□□ -0.64
BRCA1-223ENST00000494123 IGHV3-49A0A0A0MS15 119 aa11.06□□□□□ -0.64
BRCA1-223ENST00000494123 IGHV7-4-1A0A0J9YVY3 117 aa11.06□□□□□ -0.64
BRCA1-223ENST00000494123 WI2-2373I1.2A0A1W2PRP0 233 aa11.06□□□□□ -0.64
BRCA1-223ENST00000494123 HMSDA8MTL9 139 aa11.06□□□□□ -0.64
BRCA1-223ENST00000494123 LINC00869P0C866 280 aa11.06□□□□□ -0.64
BRCA1-223ENST00000494123 ZNF266Q14584 549 aa11.06□□□□□ -0.64
BRCA1-223ENST00000494123 TMEM182Q6ZP80 229 aaPredicted RBP11.06□□□□□ -0.64
BRCA1-223ENST00000494123 ZNF709Q8N972 641 aa11.06□□□□□ -0.64
BRCA1-223ENST00000494123 OR11H4Q8NGC9 324 aa11.06□□□□□ -0.64
BRCA1-223ENST00000494123 WDR61Q9GZS3 305 aaKnown RBP11.06□□□□□ -0.64
BRCA1-223ENST00000494123 PFDN2Q9UHV9 154 aa11.06□□□□□ -0.64
BRCA1-223ENST00000494123 NOTCH3Q9UM47 2321 aa11.05□□□□□ -0.64
BRCA1-223ENST00000494123 IGHV3OR16-13A0A075B7E8 117 aa11.05□□□□□ -0.64
BRCA1-223ENST00000494123 IGHV3-74A0A0B4J1X5 117 aa11.05□□□□□ -0.64
BRCA1-223ENST00000494123 C17orf112F2Z3M2 114 aa11.05□□□□□ -0.64
BRCA1-223ENST00000494123 HNRNPCP07910 306 aaKnown RBP eCLIP11.05□□□□□ -0.64
BRCA1-223ENST00000494123 ORM2P19652 201 aa11.05□□□□□ -0.64
BRCA1-223ENST00000494123 OR1B1Q8NGR6 318 aa11.05□□□□□ -0.64
BRCA1-223ENST00000494123 PPP1R14BQ96C90 147 aa11.05□□□□□ -0.64
BRCA1-223ENST00000494123 RHPN1-AS1Q9BWJ2 59 aa11.05□□□□□ -0.64
BRCA1-223ENST00000494123 GGTLC1Q9BX51 225 aa11.05□□□□□ -0.64
BRCA1-223ENST00000494123 NPCDR1Q9BY65 106 aa11.05□□□□□ -0.64
BRCA1-223ENST00000494123 TMEM231Q9H6L2 316 aa11.05□□□□□ -0.64
BRCA1-223ENST00000494123 WFDC1Q9HC57 220 aa11.05□□□□□ -0.64
BRCA1-223ENST00000494123 TECRQ9NZ01 308 aaKnown RBP11.05□□□□□ -0.64
BRCA1-223ENST00000494123 SMPXQ9UHP9 88 aa11.05□□□□□ -0.64
BRCA1-223ENST00000494123 SLC45A2Q9UMX9 530 aa11.05□□□□□ -0.64
BRCA1-223ENST00000494123 MGAM2Q2M2H8 2515 aa11.04□□□□□ -0.64
BRCA1-223ENST00000494123 A0A1W2PS18 150 aa11.04□□□□□ -0.64
BRCA1-223ENST00000494123 G3V4G9 280 aa11.04□□□□□ -0.64
BRCA1-223ENST00000494123 C1QBP02746 253 aa11.04□□□□□ -0.64
BRCA1-223ENST00000494123 C8orf88P0DMB2 117 aa11.04□□□□□ -0.64
BRCA1-223ENST00000494123 CRYBB3P26998 211 aa11.04□□□□□ -0.64
BRCA1-223ENST00000494123 EIF2B2P49770 351 aaKnown RBP11.04□□□□□ -0.64
BRCA1-223ENST00000494123 ZNF345Q14585 488 aa11.04□□□□□ -0.64
BRCA1-223ENST00000494123 MIC13Q5XKP0 118 aa11.04□□□□□ -0.64
BRCA1-223ENST00000494123 ADAMTSL5Q6ZMM2 481 aa11.04□□□□□ -0.64
BRCA1-223ENST00000494123 Q6ZRG5 221 aa11.04□□□□□ -0.64
BRCA1-223ENST00000494123 STPG3Q8N7X2 389 aa11.04□□□□□ -0.64
BRCA1-223ENST00000494123 KCNIP2Q9NS61 270 aa11.04□□□□□ -0.64
BRCA1-223ENST00000494123 DOK5Q9P104 306 aa11.04□□□□□ -0.64
BRCA1-223ENST00000494123 BORCS7-ASMTA0A0B4J1R7 106 aa11.03□□□□□ -0.64
BRCA1-223ENST00000494123 IGHV3-66A0A0C4DH42 116 aa11.03□□□□□ -0.64
BRCA1-223ENST00000494123 IGLV1-51P01701 117 aa11.03□□□□□ -0.64
BRCA1-223ENST00000494123 OR5G3P0C626 314 aa11.03□□□□□ -0.64
BRCA1-223ENST00000494123 S100A7P31151 101 aa11.03□□□□□ -0.64
BRCA1-223ENST00000494123 RPL29P47914 159 aaKnown RBP11.03□□□□□ -0.64
BRCA1-223ENST00000494123 OPCMLQ14982 345 aa11.03□□□□□ -0.64
BRCA1-223ENST00000494123 SAMD5Q5TGI4 173 aa11.03□□□□□ -0.64
BRCA1-223ENST00000494123 GRAMD2BQ96HH9 432 aa11.03□□□□□ -0.64
BRCA1-223ENST00000494123 ARL6Q9H0F7 186 aa11.03□□□□□ -0.64
BRCA1-223ENST00000494123 MLXQ9UH92 298 aa11.03□□□□□ -0.64
BRCA1-223ENST00000494123 SELENOKQ9Y6D0 94 aa11.03□□□□□ -0.64
BRCA1-223ENST00000494123 PXMP4Q9Y6I8 212 aa11.03□□□□□ -0.64
BRCA1-223ENST00000494123 A0A0D9SG52 128 aa11.02□□□□□ -0.64
BRCA1-223ENST00000494123 CHEK1O14757 476 aa11.02□□□□□ -0.64
BRCA1-223ENST00000494123 TAAR5O14804 337 aa11.02□□□□□ -0.64
BRCA1-223ENST00000494123 HYPMO75409 117 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms