RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 OR51G1Q8NGK1 321 aa13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 DYNLRB2Q8TF09 96 aa13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 ASB13Q8WXK3 278 aa13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 GPR61Q9BZJ8 451 aa13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 UQCC1Q9NVA1 299 aa13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 UBE2L5PA0A1B0GUS4 154 aa13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 IZUMO1RA6ND01 250 aa13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 K7EMT4 169 aa13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 WIPF1O43516 503 aa13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 SCAF4O95104 1147 aaKnown RBP13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 ELLP55199 621 aaPredicted RBP13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 FGL1Q08830 312 aa13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 USF2Q15853 346 aaPredicted RBP13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 CD300EQ496F6 205 aaPredicted RBP13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 TEPPQ6URK8 271 aa13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 PBDC1Q9BVG4 233 aa13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 SMIM3Q9BZL3 60 aa13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 SIGLEC8Q9NYZ4 499 aa13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 FXYD6-FXYD2A0A087WZ82 144 aa13.52□□□□□ -0.25
PDLIM7-208ENST00000493815 FNDC10F2Z333 226 aa13.52□□□□□ -0.25
PDLIM7-208ENST00000493815 C8orf88P0DMB2 117 aa13.52□□□□□ -0.25
PDLIM7-208ENST00000493815 DEFB114Q30KQ6 69 aa13.52□□□□□ -0.25
PDLIM7-208ENST00000493815 GINS3Q9BRX5 216 aa13.52□□□□□ -0.25
PDLIM7-208ENST00000493815 TMEM147Q9BVK8 224 aa13.52□□□□□ -0.25
PDLIM7-208ENST00000493815 MRPL27Q9P0M9 148 aaKnown RBP13.52□□□□□ -0.25
PDLIM7-208ENST00000493815 LSM4Q9Y4Z0 139 aaKnown RBP13.52□□□□□ -0.25
PDLIM7-208ENST00000493815 IGHV7-4-1A0A0J9YVY3 117 aa13.51□□□□□ -0.25
PDLIM7-208ENST00000493815 LYZP61626 148 aa13.51□□□□□ -0.25
PDLIM7-208ENST00000493815 BAXQ07812 192 aa13.51□□□□□ -0.25
PDLIM7-208ENST00000493815 VWC2Q2TAL6 325 aa13.51□□□□□ -0.25
PDLIM7-208ENST00000493815 CYP2G1PQ6ZSU1 146 aa13.51□□□□□ -0.25
PDLIM7-208ENST00000493815 RNF125Q96EQ8 232 aa13.51□□□□□ -0.25
PDLIM7-208ENST00000493815 MGST2Q99735 147 aa13.51□□□□□ -0.25
PDLIM7-208ENST00000493815 RHPN1-AS1Q9BWJ2 59 aa13.51□□□□□ -0.25
PDLIM7-208ENST00000493815 SMPXQ9UHP9 88 aa13.51□□□□□ -0.25
PDLIM7-208ENST00000493815 HSPB11Q9Y547 144 aa13.51□□□□□ -0.25
PDLIM7-208ENST00000493815 WI2-2373I1.2A0A1W2PRP0 233 aa13.5□□□□□ -0.25
PDLIM7-208ENST00000493815 NPPCP23582 126 aa13.5□□□□□ -0.25
PDLIM7-208ENST00000493815 EGFEM1PQ0D2K5 195 aa13.5□□□□□ -0.25
PDLIM7-208ENST00000493815 KPRPQ5T749 579 aaPredicted RBP13.5□□□□□ -0.25
PDLIM7-208ENST00000493815 ST8SIA2Q92186 375 aa13.5□□□□□ -0.25
PDLIM7-208ENST00000493815 MARC2Q969Z3 335 aa13.5□□□□□ -0.25
PDLIM7-208ENST00000493815 METTL26Q96S19 204 aa13.5□□□□□ -0.25
PDLIM7-208ENST00000493815 MEGF8Q7Z7M0 2845 aa13.5□□□□□ -0.25
PDLIM7-208ENST00000493815 DNAH3Q8TD57 4116 aa13.5□□□□□ -0.25
PDLIM7-208ENST00000493815 CHEK1O14757 476 aa13.5□□□□□ -0.25
PDLIM7-208ENST00000493815 AGPAT2O15120 278 aa13.5□□□□□ -0.25
PDLIM7-208ENST00000493815 FABP1P07148 127 aa13.5□□□□□ -0.25
PDLIM7-208ENST00000493815 RNF2Q99496 336 aa13.5□□□□□ -0.25
PDLIM7-208ENST00000493815 WDR83OSQ9Y284 106 aa13.5□□□□□ -0.25
PDLIM7-208ENST00000493815 FBN3Q75N90 2809 aa13.49□□□□□ -0.25
PDLIM7-208ENST00000493815 ATP6V1FQ16864 119 aa13.49□□□□□ -0.25
PDLIM7-208ENST00000493815 ZNF546Q86UE3 836 aa13.49□□□□□ -0.25
PDLIM7-208ENST00000493815 TMEM61Q8N0U2 210 aa13.49□□□□□ -0.25
PDLIM7-208ENST00000493815 BPIFCQ8NFQ6 507 aa13.49□□□□□ -0.25
PDLIM7-208ENST00000493815 PRR25Q96S07 402 aa13.49□□□□□ -0.25
PDLIM7-208ENST00000493815 DOK5Q9P104 306 aa13.49□□□□□ -0.25
PDLIM7-208ENST00000493815 ORM2P19652 201 aa13.48□□□□□ -0.25
PDLIM7-208ENST00000493815 FGF7P21781 194 aa13.48□□□□□ -0.25
PDLIM7-208ENST00000493815 CRYBB3P26998 211 aa13.48□□□□□ -0.25
PDLIM7-208ENST00000493815 WFDC1Q9HC57 220 aa13.48□□□□□ -0.25
PDLIM7-208ENST00000493815 TECRQ9NZ01 308 aaKnown RBP13.48□□□□□ -0.25
PDLIM7-208ENST00000493815 LINC00869P0C866 280 aa13.47□□□□□ -0.25
PDLIM7-208ENST00000493815 CAMLGP49069 296 aa13.47□□□□□ -0.25
PDLIM7-208ENST00000493815 AP2S1P53680 142 aaPredicted RBP13.47□□□□□ -0.25
PDLIM7-208ENST00000493815 STPG3Q8N7X2 389 aa13.47□□□□□ -0.25
PDLIM7-208ENST00000493815 OR1B1Q8NGR6 318 aa13.47□□□□□ -0.25
PDLIM7-208ENST00000493815 AQP10Q96PS8 301 aa13.47□□□□□ -0.25
PDLIM7-208ENST00000493815 ATP5SQ99766 215 aa13.47□□□□□ -0.25
PDLIM7-208ENST00000493815 RABAC1Q9UI14 185 aa13.47□□□□□ -0.25
PDLIM7-208ENST00000493815 SLC45A2Q9UMX9 530 aa13.47□□□□□ -0.25
PDLIM7-208ENST00000493815 IGKV3-7A0A075B6H7 116 aa13.47□□□□□ -0.25
PDLIM7-208ENST00000493815 HNRNPCP07910 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
PDLIM7-208ENST00000493815 GUCA2BQ16661 112 aa13.47□□□□□ -0.25
PDLIM7-208ENST00000493815 ST6GAL2Q96JF0 529 aa13.47□□□□□ -0.25
PDLIM7-208ENST00000493815 GGTLC1Q9BX51 225 aa13.47□□□□□ -0.25
PDLIM7-208ENST00000493815 VSIRQ9H7M9 311 aa13.47□□□□□ -0.25
PDLIM7-208ENST00000493815 TNFSF18Q9UNG2 199 aa13.47□□□□□ -0.25
PDLIM7-208ENST00000493815 ZNF256Q9Y2P7 627 aaPredicted RBP13.47□□□□□ -0.25
PDLIM7-208ENST00000493815 RNF222A6NCQ9 220 aa13.46□□□□□ -0.26
PDLIM7-208ENST00000493815 DFFBO76075 338 aa13.46□□□□□ -0.26
PDLIM7-208ENST00000493815 NUP62P37198 522 aaPredicted RBP13.46□□□□□ -0.26
PDLIM7-208ENST00000493815 DEFA6Q01524 100 aa13.46□□□□□ -0.26
PDLIM7-208ENST00000493815 MIC13Q5XKP0 118 aa13.46□□□□□ -0.26
PDLIM7-208ENST00000493815 LCN12Q6JVE5 192 aa13.46□□□□□ -0.26
PDLIM7-208ENST00000493815 INO80EQ8NBZ0 244 aaPredicted RBP13.46□□□□□ -0.26
PDLIM7-208ENST00000493815 OR11H4Q8NGC9 324 aa13.46□□□□□ -0.26
PDLIM7-208ENST00000493815 AURKAIP1Q9NWT8 199 aaPredicted RBP13.46□□□□□ -0.26
PDLIM7-208ENST00000493815 FBXL17Q9UF56 701 aa13.46□□□□□ -0.26
PDLIM7-208ENST00000493815 U3KQE9 123 aa13.46□□□□□ -0.26
PDLIM7-208ENST00000493815 ZNF785A8K8V0 405 aa13.45□□□□□ -0.26
PDLIM7-208ENST00000493815 ARPC5O15511 151 aa13.45□□□□□ -0.26
PDLIM7-208ENST00000493815 GP9P14770 177 aa13.45□□□□□ -0.26
PDLIM7-208ENST00000493815 SELENOTP62341 195 aa13.45□□□□□ -0.26
PDLIM7-208ENST00000493815 RAB31Q13636 194 aa13.45□□□□□ -0.26
PDLIM7-208ENST00000493815 RBPMS2Q6ZRY4 209 aaKnown RBP13.45□□□□□ -0.26
PDLIM7-208ENST00000493815 ARL6Q9H0F7 186 aa13.45□□□□□ -0.26
PDLIM7-208ENST00000493815 EIF2B2P49770 351 aaKnown RBP13.44□□□□□ -0.26
PDLIM7-208ENST00000493815 PPP1R14BQ96C90 147 aa13.44□□□□□ -0.26
PDLIM7-208ENST00000493815 NARS2Q96I59 477 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms