RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 IGLL1P15814 213 aa12.59□□□□□ -0.39
CACUL1-206ENST00000493518 SPATA12Q7Z6I5 190 aa12.59□□□□□ -0.39
CACUL1-206ENST00000493518 EXOC3-AS1Q8N2X6 119 aa12.59□□□□□ -0.39
CACUL1-206ENST00000493518 CIARTQ8N365 385 aaPredicted RBP12.59□□□□□ -0.39
CACUL1-206ENST00000493518 FAM90A9PA6NNJ1 464 aa12.59□□□□□ -0.39
CACUL1-206ENST00000493518 CA7P43166 264 aa12.59□□□□□ -0.39
CACUL1-206ENST00000493518 PRNTQ86SH4 94 aa12.59□□□□□ -0.39
CACUL1-206ENST00000493518 ADTRPQ96IZ2 230 aa12.59□□□□□ -0.39
CACUL1-206ENST00000493518 FAM181BA6NEQ2 426 aa12.58□□□□□ -0.39
CACUL1-206ENST00000493518 NDUFB8O95169 186 aa12.58□□□□□ -0.39
CACUL1-206ENST00000493518 CGB3P0DN86 165 aa12.58□□□□□ -0.39
CACUL1-206ENST00000493518 CGB7P0DN87 165 aa12.58□□□□□ -0.39
CACUL1-206ENST00000493518 PLGLAQ15195 96 aa12.58□□□□□ -0.39
CACUL1-206ENST00000493518 ZNF329Q86UD4 541 aa12.58□□□□□ -0.39
CACUL1-206ENST00000493518 IGF2BP2-AS1Q96M15 143 aa12.58□□□□□ -0.39
CACUL1-206ENST00000493518 RBM14Q96PK6 669 aaKnown RBP12.58□□□□□ -0.39
CACUL1-206ENST00000493518 WASHC3Q9Y3C0 194 aa12.58□□□□□ -0.39
CACUL1-206ENST00000493518 ZNF292O60281 2723 aa12.58□□□□□ -0.4
CACUL1-206ENST00000493518 IGHV3OR16-8A0A075B7F1 116 aa12.58□□□□□ -0.4
CACUL1-206ENST00000493518 A0A1W2PRE2 83 aa12.58□□□□□ -0.4
CACUL1-206ENST00000493518 RBP4P02753 201 aa12.58□□□□□ -0.4
CACUL1-206ENST00000493518 ZNF714Q96N38 554 aa12.58□□□□□ -0.4
CACUL1-206ENST00000493518 C19orf67A6NJJ6 358 aa12.58□□□□□ -0.4
CACUL1-206ENST00000493518 TSPOP30536 169 aa12.58□□□□□ -0.4
CACUL1-206ENST00000493518 TMEM200BQ69YZ2 307 aa12.58□□□□□ -0.4
CACUL1-206ENST00000493518 SLC25A48Q6ZT89 311 aaKnown RBP12.58□□□□□ -0.4
CACUL1-206ENST00000493518 ZADH2Q8N4Q0 377 aa12.58□□□□□ -0.4
CACUL1-206ENST00000493518 A0A1B0GWJ7 208 aa12.57□□□□□ -0.4
CACUL1-206ENST00000493518 SMIM27A0A1W2PRY6 76 aa12.57□□□□□ -0.4
CACUL1-206ENST00000493518 H0YJW9 148 aa12.57□□□□□ -0.4
CACUL1-206ENST00000493518 FTH1P19P0C7X4 201 aa12.57□□□□□ -0.4
CACUL1-206ENST00000493518 ASCL3Q9NQ33 180 aa12.57□□□□□ -0.4
CACUL1-206ENST00000493518 DSCAML1Q8TD84 2053 aa12.57□□□□□ -0.4
CACUL1-206ENST00000493518 TRBV9A0A0B4J1U6 114 aa12.57□□□□□ -0.4
CACUL1-206ENST00000493518 CHEK1O14757 476 aa12.57□□□□□ -0.4
CACUL1-206ENST00000493518 LHBP01229 141 aa12.57□□□□□ -0.4
CACUL1-206ENST00000493518 GUSBP1Q15486 140 aa12.57□□□□□ -0.4
CACUL1-206ENST00000493518 AARDQ4LEZ3 155 aa12.57□□□□□ -0.4
CACUL1-206ENST00000493518 OR10J3Q5JRS4 329 aa12.57□□□□□ -0.4
CACUL1-206ENST00000493518 C1orf162Q8NEQ5 155 aaPredicted RBP12.57□□□□□ -0.4
CACUL1-206ENST00000493518 FAM215AQ9Y5M1 114 aa12.57□□□□□ -0.4
CACUL1-206ENST00000493518 A0A1W2PPI3 338 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 CCL25O15444 150 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 P01737 135 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 NBEAP1P0C6P0 100 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 ZNF883P0CG24 379 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 CD40P25942 277 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 BPIFB3P59826 476 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 C2orf83Q53S99 150 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 ZNF788Q6ZQV5 615 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 ZNF257Q9Y2Q1 563 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 LOC389332A0A1B0GUA5 103 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 GOLT1AQ6ZVE7 132 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 KLHDC1Q8N7A1 406 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 PRO3102Q9H379 93 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 ZFP30Q9Y2G7 519 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 IGHV3-35A0A0C4DH35 117 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 OR4C46A6NHA9 309 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 NKX6-3A6NJ46 265 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 COL8A1P27658 744 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 MPV17L2Q567V2 206 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 TIMM23BQ5SRD1 257 aa12.56□□□□□ -0.4
CACUL1-206ENST00000493518 NCOR2Q9Y618 2525 aa12.55□□□□□ -0.4
CACUL1-206ENST00000493518 ETFRF1Q6IPR1 90 aa12.55□□□□□ -0.4
CACUL1-206ENST00000493518 RNASE8Q8TDE3 154 aaKnown RBP12.55□□□□□ -0.4
CACUL1-206ENST00000493518 DYNLRB1Q9NP97 96 aa12.55□□□□□ -0.4
CACUL1-206ENST00000493518 NDUFA4L2Q9NRX3 87 aa12.55□□□□□ -0.4
CACUL1-206ENST00000493518 FXYD5Q96DB9 178 aa12.55□□□□□ -0.4
CACUL1-206ENST00000493518 RAI1Q7Z5J4 1906 aaPredicted RBP12.55□□□□□ -0.4
CACUL1-206ENST00000493518 TRAV9-1A0A075B6T8 112 aa12.54□□□□□ -0.4
CACUL1-206ENST00000493518 SERTM2A0A1B0GWG4 89 aa12.54□□□□□ -0.4
CACUL1-206ENST00000493518 C22orf46C9J442 243 aa12.54□□□□□ -0.4
CACUL1-206ENST00000493518 BTF3P20290 206 aaKnown RBP12.54□□□□□ -0.4
CACUL1-206ENST00000493518 CTRLP40313 264 aa12.54□□□□□ -0.4
CACUL1-206ENST00000493518 BET1LQ9NYM9 111 aa12.54□□□□□ -0.4
CACUL1-206ENST00000493518 CUL9Q8IWT3 2517 aa12.54□□□□□ -0.4
CACUL1-206ENST00000493518 TMEM265A0A087WTH1 108 aa12.54□□□□□ -0.4
CACUL1-206ENST00000493518 NUDT3O95989 172 aa12.54□□□□□ -0.4
CACUL1-206ENST00000493518 HIST1H1EP10412 219 aaKnown RBP12.54□□□□□ -0.4
CACUL1-206ENST00000493518 ESDP10768 282 aa12.54□□□□□ -0.4
CACUL1-206ENST00000493518 KLF17Q5JT82 389 aaPredicted RBP12.54□□□□□ -0.4
CACUL1-206ENST00000493518 WFDC3Q8IUB2 231 aa12.54□□□□□ -0.4
CACUL1-206ENST00000493518 OR8B3Q8NGG8 313 aa12.54□□□□□ -0.4
CACUL1-206ENST00000493518 OR4C13Q8NGP0 309 aa12.54□□□□□ -0.4
CACUL1-206ENST00000493518 NAA38Q9BRA0 125 aaKnown RBP12.54□□□□□ -0.4
CACUL1-206ENST00000493518 ALKBH7Q9BT30 221 aaPredicted RBP12.54□□□□□ -0.4
CACUL1-206ENST00000493518 GAL3ST2Q9H3Q3 398 aa12.54□□□□□ -0.4
CACUL1-206ENST00000493518 RAB9BQ9NP90 201 aa12.54□□□□□ -0.4
CACUL1-206ENST00000493518 EPDR1Q9UM22 224 aa12.54□□□□□ -0.4
CACUL1-206ENST00000493518 CREBBPQ92793 2442 aa12.54□□□□□ -0.4
CACUL1-206ENST00000493518 S100A7P31151 101 aa12.54□□□□□ -0.4
CACUL1-206ENST00000493518 TMEM116Q8NCL8 245 aa12.54□□□□□ -0.4
CACUL1-206ENST00000493518 FAM222BQ8WU58 562 aa12.54□□□□□ -0.4
CACUL1-206ENST00000493518 TCRBV4S1A1TA0A5B7 111 aa12.53□□□□□ -0.4
CACUL1-206ENST00000493518 NDUFB3O43676 98 aa12.53□□□□□ -0.4
CACUL1-206ENST00000493518 BSPH1Q075Z2 132 aa12.53□□□□□ -0.4
CACUL1-206ENST00000493518 GRAMD2BQ96HH9 432 aa12.53□□□□□ -0.4
CACUL1-206ENST00000493518 C17orf77Q96MU5 243 aa12.53□□□□□ -0.4
CACUL1-206ENST00000493518 FBXL15Q9H469 300 aa12.53□□□□□ -0.4
CACUL1-206ENST00000493518 LY96Q9Y6Y9 160 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms