RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 PDLIM4P50479 330 aa17.29■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 KIR2DL5AQ8N109 375 aa17.29■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 TICRRQ7Z2Z1 1910 aa17.28■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 TCRAP04437 139 aa17.28■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 VDAC2P45880 294 aaPredicted RBP17.28■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 IGKV1D-17A0A075B6S4 117 aa17.28■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 ERVK11-1P61568 191 aa17.28■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 RNF138Q8WVD3 245 aa17.28■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 NUP210Q8TEM1 1887 aaPredicted RBP17.28■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 TDGF1P13385 188 aa17.28■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 PHLDA3Q9Y5J5 127 aa17.28■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 S4R3C0 116 aa17.28■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 MMP23AO75900 390 aa17.27■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 PVRIGQ6DKI7 326 aa17.27■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 OR9G4Q8NGQ1 327 aa17.27■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 LINC00479Q96M42 142 aa17.27■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 RNASE2P10153 161 aaKnown RBP17.27■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 ZNF329Q86UD4 541 aa17.27■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 LEPP41159 167 aa17.26■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 TMEM249Q2WGJ8 235 aa17.26■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 SAMD13Q5VXD3 122 aa17.26■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 IFI27L1Q96BM0 104 aa17.26■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 PPP1R27Q86WC6 154 aa17.26■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 TMEM167AQ8TBQ9 72 aa17.26■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 C11orf52Q96A22 123 aa17.26■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 A0A087X0K7 114 aa17.26■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 RIPPLY3P57055 190 aa17.26■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 WDR86Q86TI4 376 aa17.25■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 RNF125Q96EQ8 232 aa17.25■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 IGHV3-35A0A0C4DH35 117 aa17.25■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 IGHV1-46P01743 117 aa17.25■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 SP9P0CG40 484 aa17.25■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 C21orf62Q9NYP8 219 aa17.25■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 LHFPL4Q7Z7J7 247 aa17.25■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 TMEM190Q8WZ59 177 aa17.25■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 MLANAQ16655 118 aa17.25■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 MTURNQ8N3F0 131 aa17.25■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 ITGB1BP1O14713 200 aa17.24■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 FAM53AQ6NSI3 398 aaPredicted RBP17.24■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 TRGV9Q99603 122 aa17.24■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 A0A1B0GWJ7 208 aa17.24■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 ZNF503-AS2A6NEH8 195 aa17.24■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 CD5LO43866 347 aa17.24■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 TMEM14BQ9NUH8 114 aa17.24■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 THADAQ6YHU6 1953 aa17.24■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 A0A1B0GWB2 263 aa17.24■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 DMRTC2Q8IXT2 367 aaPredicted RBP17.24■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 PLSCR4Q9NRQ2 329 aa17.24■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 DPM3Q9P2X0 92 aa17.24■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 B9A039 149 aa17.24■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 TMEM133Q9H2Q1 129 aa17.24■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 NHP2Q9NX24 153 aaKnown RBP17.24■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 KIAA1549LQ6ZVL6 1849 aa17.23■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 TMEM105Q8N8V8 129 aa17.23■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 PPBPP02775 128 aa17.23■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 DIDO1Q9BTC0 2240 aaKnown RBP17.23■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 DLX6P56179 175 aa17.23■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 MRPL16Q9NX20 251 aaKnown RBP17.23■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 PSG1P11464 419 aa17.23■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 WNT2P09544 360 aa17.22■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 LOXL3P58215 753 aa17.22■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 GUSBP1Q15486 140 aa17.22■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 TPTE2P1Q5T6R2 138 aa17.22■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 MDS2Q8NDY4 140 aa17.22■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 NXT2Q9NPJ8 142 aaKnown RBP17.22■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 CNOT1A5YKK6 2376 aaKnown RBP17.22■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 TOMM40O96008 361 aa17.22■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 ID1P41134 155 aa17.22■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 BSPH1Q075Z2 132 aa17.22■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 VWC2Q2TAL6 325 aa17.22■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 FABP5P3A8MUU1 101 aa17.22■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 DGAT2L7PQ6IED9 249 aa17.22■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 NPPCP23582 126 aa17.21■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 EXOC3-AS1Q8N2X6 119 aa17.21■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 H0YJW9 148 aa17.21■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 IGHV3-23P01764 117 aa17.21■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 RPRMLQ8N4K4 120 aa17.21■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 C11orf1Q9H5F2 150 aa17.21■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 SMIM27A0A1W2PRY6 76 aa17.21■□□□□ 0.35
CHKB-CPT1B-203ENST00000492556 PI4KAP42356 2102 aa17.21■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 A0A0G2JLM5 398 aa17.21■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 GGTLC3B5MD39 225 aa17.21■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 H7C2G1 150 aa17.21■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 LOC105371242A0A075B767 164 aa17.2■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 DPM2O94777 84 aa17.2■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 ZNF138P52744 262 aa17.2■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 SLAQ13239 276 aa17.2■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 APOBEC3AP31941 199 aaPredicted RBP17.2■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 SCGB3A1Q96QR1 104 aa17.2■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 IGKV1-16P04430 117 aa17.2■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 PRSS8Q16651 343 aa17.2■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 SAMD5Q5TGI4 173 aa17.2■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 SLC25A39Q9BZJ4 359 aaPredicted RBP17.2■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 GFRA4Q9GZZ7 299 aa17.2■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 GAGE12BA1L429 117 aa17.2■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 D6R8Y8 96 aa17.2■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 IGKV3-15P01624 115 aa17.2■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 LGALS3P17931 250 aaKnown RBP17.2■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 MYO7BQ6PIF6 2116 aa17.2■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 AKAP6Q13023 2319 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 825.8 ms