RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 RAB40CQ96S21 281 aa10.3□□□□□ -0.76
HDAC3-213ENST00000492506 NICN1Q9BSH3 213 aa10.3□□□□□ -0.76
HDAC3-213ENST00000492506 ANXA10Q9UJ72 324 aa10.3□□□□□ -0.76
HDAC3-213ENST00000492506 PAM16Q9Y3D7 125 aa10.3□□□□□ -0.76
HDAC3-213ENST00000492506 IGKV1-27A0A075B6S5 117 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 FAM24AA6NFZ4 105 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 ZFP92A6NM28 416 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 MT-ND6P03923 174 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 IGLC2P0DOY2 106 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 IGLC3P0DOY3 106 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 GZMHP20718 246 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 CCL1P22362 96 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 SPATA45Q537H7 98 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 UTF1Q5T230 341 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 PRAMEF5Q5TYX0 476 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 PRR27Q6MZM9 219 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 RTN4RL2Q86UN3 420 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 OR1L6Q8NGR2 347 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 ZNF596Q8TC21 504 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 GPR146Q96CH1 333 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 TMEM56Q96MV1 263 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 CST9LQ9H4G1 147 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 ZNF286AQ9HBT8 521 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 IL36RNQ9UBH0 155 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 UBE2J1Q9Y385 318 aaPredicted RBP10.29□□□□□ -0.76
HDAC3-213ENST00000492506 TMEM56-RWDD3S4R434 201 aa10.29□□□□□ -0.76
HDAC3-213ENST00000492506 FAM90A18PA6NE21 464 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 FAM90A16PA6NEW6 464 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 FAM90A20PA6NIJ5 464 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 FAM90A9PA6NNJ1 464 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 FAM90A12PA8MX19 464 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 FAM90A5PA8MXJ8 464 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 BUB1B-PAK6H3BSN5 160 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 HAND1O96004 215 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 FAM90A15PP0C7V4 464 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 FAM90A13PP0C7W8 464 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 FAM90A14PP0C7W9 464 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 FAM90A24PP0C7X0 464 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 IL3RAP26951 378 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 HERV-K104P61576 105 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 HBG1P69891 147 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 HBG2P69892 147 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 Q6ZWC4 215 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 LYZL2Q7Z4W2 148 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 ZNF695Q8IW36 515 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 STPG4Q8N801 248 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 TOMM40LQ969M1 308 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 SAMD10Q9BYL1 202 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 LINC00527Q9UJ94 153 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 MOB4Q9Y3A3 225 aa10.28□□□□□ -0.76
HDAC3-213ENST00000492506 C17orf112F2Z3M2 114 aa10.27□□□□□ -0.77
HDAC3-213ENST00000492506 H3BSH0 61 aa10.27□□□□□ -0.77
HDAC3-213ENST00000492506 CCL24O00175 119 aa10.27□□□□□ -0.77
HDAC3-213ENST00000492506 SDCBPO00560 298 aaPredicted RBP10.27□□□□□ -0.77
HDAC3-213ENST00000492506 ZNF253O75346 499 aa10.27□□□□□ -0.77
HDAC3-213ENST00000492506 CTXN2P0C2S0 81 aa10.27□□□□□ -0.77
HDAC3-213ENST00000492506 CRISP2P16562 243 aa10.27□□□□□ -0.77
HDAC3-213ENST00000492506 BLVRBP30043 206 aaPredicted RBP10.27□□□□□ -0.77
HDAC3-213ENST00000492506 TFPI2P48307 235 aa10.27□□□□□ -0.77
HDAC3-213ENST00000492506 VAMP3Q15836 100 aa10.27□□□□□ -0.77
HDAC3-213ENST00000492506 HLA-DRB5Q30154 266 aa10.27□□□□□ -0.77
HDAC3-213ENST00000492506 CST9LP1Q5W188 147 aa10.27□□□□□ -0.77
HDAC3-213ENST00000492506 C5orf56Q8N8D9 126 aa10.27□□□□□ -0.77
HDAC3-213ENST00000492506 RCHY1Q96PM5 261 aa10.27□□□□□ -0.77
HDAC3-213ENST00000492506 GPER1Q99527 375 aa10.27□□□□□ -0.77
HDAC3-213ENST00000492506 HSPB9Q9BQS6 159 aa10.27□□□□□ -0.77
HDAC3-213ENST00000492506 ABHD14AQ9BUJ0 271 aa10.27□□□□□ -0.77
HDAC3-213ENST00000492506 ZNF320A2RRD8 509 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 DIRC3C9JPN6 131 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 MGST3O14880 152 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 PDE6DO43924 150 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 HYPMO75409 117 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 VDAC1P21796 283 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 S100GP29377 79 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 CEACAM3P40198 252 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 ID3Q02535 119 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 MMDQ15546 238 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 DEFB136Q30KP8 78 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 OR10J3Q5JRS4 329 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 C9orf66Q5T8R8 295 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 WDR73Q6P4I2 378 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 SBSPONQ8IVN8 264 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 TMEM217Q8N7C4 229 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 ZNF709Q8N972 641 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 Q8NFD4 153 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 OR52M1Q8NGK5 317 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 ADAT3Q96EY9 351 aaPredicted RBP10.26□□□□□ -0.77
HDAC3-213ENST00000492506 KRTAP17-1Q9BYP8 105 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 TMEM222Q9H0R3 208 aa10.26□□□□□ -0.77
HDAC3-213ENST00000492506 CTXND1A0A1B0GTU2 59 aa10.25□□□□□ -0.77
HDAC3-213ENST00000492506 A0A1B0GV72 72 aa10.25□□□□□ -0.77
HDAC3-213ENST00000492506 LINC01548A6NM66 108 aa10.25□□□□□ -0.77
HDAC3-213ENST00000492506 OOSP1A8MZH6 123 aa10.25□□□□□ -0.77
HDAC3-213ENST00000492506 IGHG2P01859 326 aa10.25□□□□□ -0.77
HDAC3-213ENST00000492506 FAM106CPP0CH98 169 aa10.25□□□□□ -0.77
HDAC3-213ENST00000492506 TSPOP30536 169 aa10.25□□□□□ -0.77
HDAC3-213ENST00000492506 ZNF146Q15072 292 aa10.25□□□□□ -0.77
HDAC3-213ENST00000492506 SPIN3Q5JUX0 258 aa10.25□□□□□ -0.77
HDAC3-213ENST00000492506 CCDC144NLQ6NUI1 221 aa10.25□□□□□ -0.77
HDAC3-213ENST00000492506 FAM71F2Q6NXP2 309 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms