RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, human

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-222	ENST00000492423	ZNF491	Q8N8L2	437 aa		11.51	□□□□□ -0.57
COPS7B-222	ENST00000492423	FAM213B	Q8TBF2	198 aa		11.51	□□□□□ -0.57
COPS7B-222	ENST00000492423	LRRC20	Q8TCA0	184 aa		11.51	□□□□□ -0.57
COPS7B-222	ENST00000492423	NSD1	Q96L73	2696 aa	Predicted RBP	11.5	□□□□□ -0.57
COPS7B-222	ENST00000492423		A0A0G2JLM5	398 aa		11.5	□□□□□ -0.57
COPS7B-222	ENST00000492423	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.5	□□□□□ -0.57
COPS7B-222	ENST00000492423	TGOLN2	O43493	480 aa		11.5	□□□□□ -0.57
COPS7B-222	ENST00000492423	TRBV12-3	P01733	135 aa		11.5	□□□□□ -0.57
COPS7B-222	ENST00000492423	MB	P02144	154 aa		11.5	□□□□□ -0.57
COPS7B-222	ENST00000492423	PSG1	P11464	419 aa		11.5	□□□□□ -0.57
COPS7B-222	ENST00000492423	PLP1	P60201	277 aa		11.5	□□□□□ -0.57
COPS7B-222	ENST00000492423	ZNF616	Q08AN1	781 aa		11.5	□□□□□ -0.57
COPS7B-222	ENST00000492423	TCTEX1D4	Q5JR98	221 aa		11.5	□□□□□ -0.57
COPS7B-222	ENST00000492423	FAM122C	Q6P4D5	195 aa		11.5	□□□□□ -0.57
COPS7B-222	ENST00000492423	OR5AU1	Q8NGC0	362 aa		11.5	□□□□□ -0.57
COPS7B-222	ENST00000492423	OR10G4	Q8NGN3	311 aa		11.5	□□□□□ -0.57
COPS7B-222	ENST00000492423	OR10G9	Q8NGN4	311 aa		11.5	□□□□□ -0.57
COPS7B-222	ENST00000492423	OR10G7	Q8NGN6	311 aa		11.5	□□□□□ -0.57
COPS7B-222	ENST00000492423	SAT2	Q96F10	170 aa	Predicted RBP	11.5	□□□□□ -0.57
COPS7B-222	ENST00000492423	RCC1L	Q96I51	464 aa	Known RBP	11.5	□□□□□ -0.57
COPS7B-222	ENST00000492423	GNB4	Q9HAV0	340 aa		11.5	□□□□□ -0.57
COPS7B-222	ENST00000492423	GAR1	Q9NY12	217 aa	Known RBP	11.5	□□□□□ -0.57
COPS7B-222	ENST00000492423	SEC14L6	B5MCN3	397 aa		11.49	□□□□□ -0.57
COPS7B-222	ENST00000492423	PPP5D1	E7EU14	171 aa		11.49	□□□□□ -0.57
COPS7B-222	ENST00000492423	EIF3G	O75821	320 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
COPS7B-222	ENST00000492423	CLEC3B	P05452	202 aa		11.49	□□□□□ -0.57
COPS7B-222	ENST00000492423	BLOC1S1	P78537	153 aa		11.49	□□□□□ -0.57
COPS7B-222	ENST00000492423	PXDC1	Q5TGL8	231 aa		11.49	□□□□□ -0.57
COPS7B-222	ENST00000492423	PATE2	Q6UY27	113 aa		11.49	□□□□□ -0.57
COPS7B-222	ENST00000492423	SLC25A22	Q9H936	323 aa		11.49	□□□□□ -0.57
COPS7B-222	ENST00000492423	CTXND1	A0A1B0GTU2	59 aa		11.48	□□□□□ -0.57
COPS7B-222	ENST00000492423	WI2-2373I1.2	A0A1W2PRP0	233 aa		11.48	□□□□□ -0.57
COPS7B-222	ENST00000492423	NUPL2	O15504	423 aa	Known RBP	11.48	□□□□□ -0.57
COPS7B-222	ENST00000492423	FABP1	P07148	127 aa		11.48	□□□□□ -0.57
COPS7B-222	ENST00000492423	OR5G3	P0C626	314 aa		11.48	□□□□□ -0.57
COPS7B-222	ENST00000492423	SPATA31B1P	Q5VZV4	182 aa		11.48	□□□□□ -0.57
COPS7B-222	ENST00000492423	SPSB3	Q6PJ21	355 aa		11.48	□□□□□ -0.57
COPS7B-222	ENST00000492423	ZNF600	Q6ZNG1	722 aa		11.48	□□□□□ -0.57
COPS7B-222	ENST00000492423	OR4X2	Q8NGF9	303 aa		11.48	□□□□□ -0.57
COPS7B-222	ENST00000492423	OR51G1	Q8NGK1	321 aa		11.48	□□□□□ -0.57
COPS7B-222	ENST00000492423	OR4F5	Q8NH21	305 aa		11.48	□□□□□ -0.57
COPS7B-222	ENST00000492423	TMEM37	Q8WXS4	190 aa		11.48	□□□□□ -0.57
COPS7B-222	ENST00000492423	DOK5	Q9P104	306 aa		11.48	□□□□□ -0.57
COPS7B-222	ENST00000492423	CLPSL1	A2RUU4	121 aa		11.47	□□□□□ -0.57
COPS7B-222	ENST00000492423	BMPR1B	O00238	502 aa		11.47	□□□□□ -0.57
COPS7B-222	ENST00000492423	SCGB2A1	O75556	95 aa		11.47	□□□□□ -0.57
COPS7B-222	ENST00000492423	OR2C1	O95371	312 aa		11.47	□□□□□ -0.57
COPS7B-222	ENST00000492423	RD3L	P0DJH9	198 aa		11.47	□□□□□ -0.57
COPS7B-222	ENST00000492423	ARL3	P36405	182 aa		11.47	□□□□□ -0.57
COPS7B-222	ENST00000492423	CDC34	P49427	236 aa	Predicted RBP	11.47	□□□□□ -0.57
COPS7B-222	ENST00000492423	PROK1	P58294	105 aa		11.47	□□□□□ -0.57
COPS7B-222	ENST00000492423	RAB14	P61106	215 aa		11.47	□□□□□ -0.57
COPS7B-222	ENST00000492423	LYZ	P61626	148 aa		11.47	□□□□□ -0.57
COPS7B-222	ENST00000492423	LYPD6B	Q8NI32	183 aa		11.47	□□□□□ -0.57
COPS7B-222	ENST00000492423	MBD3L1	Q8WWY6	194 aa		11.47	□□□□□ -0.57
COPS7B-222	ENST00000492423	RAB24	Q969Q5	203 aa		11.47	□□□□□ -0.57
COPS7B-222	ENST00000492423	UBE2E2	Q96LR5	201 aa		11.47	□□□□□ -0.57
COPS7B-222	ENST00000492423	OR5B12	Q96R08	314 aa		11.47	□□□□□ -0.57
COPS7B-222	ENST00000492423	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.47	□□□□□ -0.57
COPS7B-222	ENST00000492423	ZFAND3	Q9H8U3	227 aa		11.47	□□□□□ -0.57
COPS7B-222	ENST00000492423	RNF114	Q9Y508	228 aa		11.47	□□□□□ -0.57
COPS7B-222	ENST00000492423	IGHV3-35	A0A0C4DH35	117 aa		11.46	□□□□□ -0.57
COPS7B-222	ENST00000492423	ANKRD34B	A5PLL1	514 aa		11.46	□□□□□ -0.57
COPS7B-222	ENST00000492423	COX7A2P2	O60397	106 aa		11.46	□□□□□ -0.57
COPS7B-222	ENST00000492423	IL4	P05112	153 aa		11.46	□□□□□ -0.57
COPS7B-222	ENST00000492423	LGALS1	P09382	135 aa	Known RBP	11.46	□□□□□ -0.57
COPS7B-222	ENST00000492423	USF2	Q15853	346 aa	Predicted RBP	11.46	□□□□□ -0.57
COPS7B-222	ENST00000492423	LINC01559	Q495D7	138 aa		11.46	□□□□□ -0.57
COPS7B-222	ENST00000492423	MORN5	Q5VZ52	161 aa		11.46	□□□□□ -0.57
COPS7B-222	ENST00000492423	C18orf65	Q6ZTR6	163 aa		11.46	□□□□□ -0.57
COPS7B-222	ENST00000492423	MIR17HG	Q75NE6	70 aa		11.46	□□□□□ -0.57
COPS7B-222	ENST00000492423	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.46	□□□□□ -0.57
COPS7B-222	ENST00000492423	OR1L4	Q8NGR5	311 aa		11.46	□□□□□ -0.57
COPS7B-222	ENST00000492423	OR1B1	Q8NGR6	318 aa		11.46	□□□□□ -0.57
COPS7B-222	ENST00000492423		Q8WTZ3	238 aa		11.46	□□□□□ -0.57
COPS7B-222	ENST00000492423	GATAD1	Q8WUU5	269 aa		11.46	□□□□□ -0.57
COPS7B-222	ENST00000492423	RNF125	Q96EQ8	232 aa		11.46	□□□□□ -0.57
COPS7B-222	ENST00000492423	PFDN5	Q99471	154 aa		11.46	□□□□□ -0.57
COPS7B-222	ENST00000492423	SEPSECS	Q9HD40	501 aa	Known RBP	11.46	□□□□□ -0.57
COPS7B-222	ENST00000492423	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
COPS7B-222	ENST00000492423	MAP1LC3B2	A6NCE7	125 aa		11.45	□□□□□ -0.58
COPS7B-222	ENST00000492423	LINC00862	A6NCI5	91 aa		11.45	□□□□□ -0.58
COPS7B-222	ENST00000492423	H2AFB1	P0C5Y9	115 aa		11.45	□□□□□ -0.58
COPS7B-222	ENST00000492423	CD28	P10747	220 aa		11.45	□□□□□ -0.58
COPS7B-222	ENST00000492423	ORM2	P19652	201 aa		11.45	□□□□□ -0.58
COPS7B-222	ENST00000492423	RHOB	P62745	196 aa		11.45	□□□□□ -0.58
COPS7B-222	ENST00000492423	FAM209B	Q5JX69	171 aa		11.45	□□□□□ -0.58
COPS7B-222	ENST00000492423	FAM78B	Q5VT40	261 aa		11.45	□□□□□ -0.58
COPS7B-222	ENST00000492423	C10orf113	Q5VZT2	155 aa		11.45	□□□□□ -0.58
COPS7B-222	ENST00000492423	HIST2H2BD	Q6DRA6	164 aa		11.45	□□□□□ -0.58
COPS7B-222	ENST00000492423	LCN15	Q6UWW0	184 aa		11.45	□□□□□ -0.58
COPS7B-222	ENST00000492423	UHRF2	Q96PU4	802 aa		11.45	□□□□□ -0.58
COPS7B-222	ENST00000492423	RNF2	Q99496	336 aa		11.45	□□□□□ -0.58
COPS7B-222	ENST00000492423	C19orf24	Q9BVV8	132 aa		11.45	□□□□□ -0.58
COPS7B-222	ENST00000492423	MRPL32	Q9BYC8	188 aa	Known RBP	11.45	□□□□□ -0.58
COPS7B-222	ENST00000492423	MAP1LC3B	Q9GZQ8	125 aa		11.45	□□□□□ -0.58
COPS7B-222	ENST00000492423	DNAJC4	Q9NNZ3	241 aa		11.45	□□□□□ -0.58
COPS7B-222	ENST00000492423	MRPL27	Q9P0M9	148 aa	Known RBP	11.45	□□□□□ -0.58
COPS7B-222	ENST00000492423	PEF1	Q9UBV8	284 aa	Known RBP	11.45	□□□□□ -0.58
COPS7B-222	ENST00000492423	FUT9	Q9Y231	359 aa		11.45	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms