RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 F8P00451 2351 aa7.5□□□□□ -1.21
USP54-214ENST00000492357 A0A1W2PPV4 95 aa7.49□□□□□ -1.21
USP54-214ENST00000492357 WI2-2373I1.2A0A1W2PRP0 233 aa7.49□□□□□ -1.21
USP54-214ENST00000492357 ZNF705EA8MWA4 302 aaPredicted RBP7.49□□□□□ -1.21
USP54-214ENST00000492357 NDUFA4O00483 81 aa7.49□□□□□ -1.21
USP54-214ENST00000492357 LGALS1P09382 135 aaKnown RBP7.49□□□□□ -1.21
USP54-214ENST00000492357 H2AFB1P0C5Y9 115 aa7.49□□□□□ -1.21
USP54-214ENST00000492357 OR5G3P0C626 314 aa7.49□□□□□ -1.21
USP54-214ENST00000492357 TAS2R45P59539 299 aa7.49□□□□□ -1.21
USP54-214ENST00000492357 FOXL1Q12952 345 aa7.49□□□□□ -1.21
USP54-214ENST00000492357 MLANAQ16655 118 aa7.49□□□□□ -1.21
USP54-214ENST00000492357 MIC13Q5XKP0 118 aa7.49□□□□□ -1.21
USP54-214ENST00000492357 PQLC2Q6ZP29 291 aa7.49□□□□□ -1.21
USP54-214ENST00000492357 TMEM182Q6ZP80 229 aaPredicted RBP7.49□□□□□ -1.21
USP54-214ENST00000492357 C19orf35Q6ZS72 473 aa7.49□□□□□ -1.21
USP54-214ENST00000492357 CCDC140Q96MF4 163 aa7.49□□□□□ -1.21
USP54-214ENST00000492357 TXNDC17Q9BRA2 123 aa7.49□□□□□ -1.21
USP54-214ENST00000492357 SMDT1Q9H4I9 107 aa7.49□□□□□ -1.21
USP54-214ENST00000492357 DNAJC4Q9NNZ3 241 aa7.49□□□□□ -1.21
USP54-214ENST00000492357 RPRMQ9NS64 109 aa7.49□□□□□ -1.21
USP54-214ENST00000492357 MRPL36Q9P0J6 103 aaKnown RBP7.49□□□□□ -1.21
USP54-214ENST00000492357 CELSR1Q9NYQ6 3014 aa7.48□□□□□ -1.21
USP54-214ENST00000492357 LINC00862A6NCI5 91 aa7.48□□□□□ -1.21
USP54-214ENST00000492357 BMPR1BO00238 502 aa7.48□□□□□ -1.21
USP54-214ENST00000492357 GGCTO75223 188 aaKnown RBP7.48□□□□□ -1.21
USP54-214ENST00000492357 HYPMO75409 117 aa7.48□□□□□ -1.21
USP54-214ENST00000492357 YIF1AO95070 293 aa7.48□□□□□ -1.21
USP54-214ENST00000492357 CLEC3BP05452 202 aa7.48□□□□□ -1.21
USP54-214ENST00000492357 PSG1P11464 419 aa7.48□□□□□ -1.21
USP54-214ENST00000492357 CDC34P49427 236 aaPredicted RBP7.48□□□□□ -1.21
USP54-214ENST00000492357 PSMB3P49720 205 aa7.48□□□□□ -1.21
USP54-214ENST00000492357 ELLP55199 621 aaPredicted RBP7.48□□□□□ -1.21
USP54-214ENST00000492357 KIAA0141Q14154 515 aaPredicted RBP7.48□□□□□ -1.21
USP54-214ENST00000492357 C10orf113Q5VZT2 155 aa7.48□□□□□ -1.21
USP54-214ENST00000492357 IL34Q6ZMJ4 242 aa7.48□□□□□ -1.21
USP54-214ENST00000492357 RPP25LQ8N5L8 163 aaKnown RBP7.48□□□□□ -1.21
USP54-214ENST00000492357 OR5AU1Q8NGC0 362 aa7.48□□□□□ -1.21
USP54-214ENST00000492357 SUN5Q8TC36 379 aa7.48□□□□□ -1.21
USP54-214ENST00000492357 RNF125Q96EQ8 232 aa7.48□□□□□ -1.21
USP54-214ENST00000492357 RCC1LQ96I51 464 aaKnown RBP7.48□□□□□ -1.21
USP54-214ENST00000492357 GPR82Q96P67 336 aa7.48□□□□□ -1.21
USP54-214ENST00000492357 MS4A10Q96PG2 267 aa7.48□□□□□ -1.21
USP54-214ENST00000492357 DUX5Q96PT3 197 aa7.48□□□□□ -1.21
USP54-214ENST00000492357 PEF1Q9UBV8 284 aaKnown RBP7.48□□□□□ -1.21
USP54-214ENST00000492357 LINC00527Q9UJ94 153 aa7.48□□□□□ -1.21
USP54-214ENST00000492357 FUT9Q9Y231 359 aa7.48□□□□□ -1.21
USP54-214ENST00000492357 FN1P02751 2386 aaKnown RBP7.47□□□□□ -1.21
USP54-214ENST00000492357 RAB19A4D1S5 217 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 K7EMT4 169 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 COX7A2P2O60397 106 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 STAG3L2P0CL84 134 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 STAG3L3P0CL85 134 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 ZP3P21754 424 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 GPR183P32249 361 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 BMI1P35226 326 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 ADMP35318 185 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 ARL3P36405 182 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 MEOX2P50222 304 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 PROK1P58294 105 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 ZNF90Q03938 601 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 TMEM95Q3KNT9 176 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 TIGITQ495A1 244 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 KHDC3LQ587J8 217 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 GPHB5Q86YW7 130 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 EIF4E3Q8N5X7 224 aaKnown RBP7.47□□□□□ -1.21
USP54-214ENST00000492357 FAM213BQ8TBF2 198 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 C4orf3Q8WVX3 66 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 KLK15Q9H2R5 256 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 TECRQ9NZ01 308 aaKnown RBP7.47□□□□□ -1.21
USP54-214ENST00000492357 MRPL27Q9P0M9 148 aaKnown RBP7.47□□□□□ -1.21
USP54-214ENST00000492357 HIGD1AQ9Y241 93 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 RNF114Q9Y508 228 aa7.47□□□□□ -1.21
USP54-214ENST00000492357 MAP1LC3B2A6NCE7 125 aa7.46□□□□□ -1.22
USP54-214ENST00000492357 OR2T8A6NH00 312 aa7.46□□□□□ -1.22
USP54-214ENST00000492357 LGALS9O00182 355 aa7.46□□□□□ -1.22
USP54-214ENST00000492357 CXorf1O96002 111 aa7.46□□□□□ -1.22
USP54-214ENST00000492357 IFNA1P01562 189 aa7.46□□□□□ -1.22
USP54-214ENST00000492357 CD5P06127 495 aa7.46□□□□□ -1.22
USP54-214ENST00000492357 C8orf88P0DMB2 117 aa7.46□□□□□ -1.22
USP54-214ENST00000492357 FAM106AQ4KMX7 169 aa7.46□□□□□ -1.22
USP54-214ENST00000492357 FAM74A1Q5RGS3 127 aa7.46□□□□□ -1.22
USP54-214ENST00000492357 C1orf194Q5T5A4 169 aa7.46□□□□□ -1.22
USP54-214ENST00000492357 FAM78BQ5VT40 261 aa7.46□□□□□ -1.22
USP54-214ENST00000492357 CLEC19AQ6UXS0 136 aa7.46□□□□□ -1.22
USP54-214ENST00000492357 Q71RC1 249 aaPredicted RBP7.46□□□□□ -1.22
USP54-214ENST00000492357 ZNF329Q86UD4 541 aa7.46□□□□□ -1.22
USP54-214ENST00000492357 RAB24Q969Q5 203 aa7.46□□□□□ -1.22
USP54-214ENST00000492357 NARS2Q96I59 477 aaKnown RBP7.46□□□□□ -1.22
USP54-214ENST00000492357 CHRDL1Q9BU40 450 aa7.46□□□□□ -1.22
USP54-214ENST00000492357 PBDC1Q9BVG4 233 aa7.46□□□□□ -1.22
USP54-214ENST00000492357 NKX6-2Q9C056 277 aaPredicted RBP7.46□□□□□ -1.22
USP54-214ENST00000492357 MAP1LC3BQ9GZQ8 125 aa7.46□□□□□ -1.22
USP54-214ENST00000492357 ZFAND3Q9H8U3 227 aa7.46□□□□□ -1.22
USP54-214ENST00000492357 TMEM167BQ9NRX6 74 aa7.46□□□□□ -1.22
USP54-214ENST00000492357 TMEM14CQ9P0S9 112 aa7.46□□□□□ -1.22
USP54-214ENST00000492357 TSSC4Q9Y5U2 329 aaPredicted RBP7.46□□□□□ -1.22
USP54-214ENST00000492357 IGHV3-21A0A0B4J1V1 117 aa7.45□□□□□ -1.22
USP54-214ENST00000492357 A8MWP6 167 aa7.45□□□□□ -1.22
USP54-214ENST00000492357 I3L521 148 aa7.45□□□□□ -1.22
USP54-214ENST00000492357 IGHV3-48P01763 117 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms