RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	ANXA7	P20073	488 aa	Known RBP	11.19	□□□□□ -0.62
MRPL55-231	ENST00000492170	CRYBB3	P26998	211 aa		11.19	□□□□□ -0.62
MRPL55-231	ENST00000492170	P2RY1	P47900	373 aa		11.19	□□□□□ -0.62
MRPL55-231	ENST00000492170	TCTA	P57738	103 aa		11.19	□□□□□ -0.62
MRPL55-231	ENST00000492170	IFITM3	Q01628	133 aa		11.19	□□□□□ -0.62
MRPL55-231	ENST00000492170	GRAMD2B	Q96HH9	432 aa		11.19	□□□□□ -0.62
MRPL55-231	ENST00000492170	TMED3	Q9Y3Q3	217 aa		11.19	□□□□□ -0.62
MRPL55-231	ENST00000492170	DNAH6	Q9C0G6	4158 aa		11.19	□□□□□ -0.62
MRPL55-231	ENST00000492170	TRAV30	A0A087WSZ9	112 aa		11.18	□□□□□ -0.62
MRPL55-231	ENST00000492170		K7EQG2	157 aa		11.18	□□□□□ -0.62
MRPL55-231	ENST00000492170	ZNF688	P0C7X2	276 aa		11.18	□□□□□ -0.62
MRPL55-231	ENST00000492170	SPP1	P10451	314 aa		11.18	□□□□□ -0.62
MRPL55-231	ENST00000492170	HTR2B	P41595	481 aa		11.18	□□□□□ -0.62
MRPL55-231	ENST00000492170	EIF2B2	P49770	351 aa	Known RBP	11.18	□□□□□ -0.62
MRPL55-231	ENST00000492170	MORN3	Q6PF18	240 aa	Predicted RBP	11.18	□□□□□ -0.62
MRPL55-231	ENST00000492170	TRPT1	Q86TN4	253 aa	Known RBP	11.18	□□□□□ -0.62
MRPL55-231	ENST00000492170	C11orf94	C9JXX5	98 aa		11.17	□□□□□ -0.62
MRPL55-231	ENST00000492170	IGKV1-17	P01599	117 aa		11.17	□□□□□ -0.62
MRPL55-231	ENST00000492170	MLANA	Q16655	118 aa		11.17	□□□□□ -0.62
MRPL55-231	ENST00000492170	TIGIT	Q495A1	244 aa		11.17	□□□□□ -0.62
MRPL55-231	ENST00000492170	MZT2B	Q6NZ67	158 aa		11.17	□□□□□ -0.62
MRPL55-231	ENST00000492170		Q8NAQ8	132 aa		11.17	□□□□□ -0.62
MRPL55-231	ENST00000492170	HRH4	Q9H3N8	390 aa		11.17	□□□□□ -0.62
MRPL55-231	ENST00000492170	NUDT15	Q9NV35	164 aa		11.17	□□□□□ -0.62
MRPL55-231	ENST00000492170	CEBPZOS	A8MTT3	80 aa		11.16	□□□□□ -0.62
MRPL55-231	ENST00000492170	FAM90A26	D6RGX4	464 aa		11.16	□□□□□ -0.62
MRPL55-231	ENST00000492170	SLC25A4	P12235	298 aa		11.16	□□□□□ -0.62
MRPL55-231	ENST00000492170	MIF	P14174	115 aa		11.16	□□□□□ -0.62
MRPL55-231	ENST00000492170	C4orf46	Q504U0	113 aa		11.16	□□□□□ -0.62
MRPL55-231	ENST00000492170	C2orf83	Q53S99	150 aa		11.16	□□□□□ -0.62
MRPL55-231	ENST00000492170	GGNBP1	Q5YKI7	109 aa		11.16	□□□□□ -0.62
MRPL55-231	ENST00000492170	OR1S2	Q8NGQ3	325 aa		11.16	□□□□□ -0.62
MRPL55-231	ENST00000492170	COQ8A	Q8NI60	647 aa		11.16	□□□□□ -0.62
MRPL55-231	ENST00000492170	MITD1	Q8WV92	249 aa		11.16	□□□□□ -0.62
MRPL55-231	ENST00000492170	HEYL	Q9NQ87	328 aa	Predicted RBP	11.16	□□□□□ -0.62
MRPL55-231	ENST00000492170	IGHV4-28	A0A0C4DH34	117 aa		11.15	□□□□□ -0.62
MRPL55-231	ENST00000492170	FAM240B	A0A1B0GVZ2	78 aa		11.15	□□□□□ -0.62
MRPL55-231	ENST00000492170	HELT	A6NFD8	242 aa		11.15	□□□□□ -0.62
MRPL55-231	ENST00000492170	KNCN	A6PVL3	124 aa		11.15	□□□□□ -0.62
MRPL55-231	ENST00000492170	NXPH3	O95157	252 aa		11.15	□□□□□ -0.62
MRPL55-231	ENST00000492170	HOXB5	P09067	269 aa		11.15	□□□□□ -0.62
MRPL55-231	ENST00000492170	GIG44	P09565	113 aa	Predicted RBP	11.15	□□□□□ -0.62
MRPL55-231	ENST00000492170	RND2	P52198	227 aa		11.15	□□□□□ -0.62
MRPL55-231	ENST00000492170	ACTL10	Q5JWF8	245 aa		11.15	□□□□□ -0.62
MRPL55-231	ENST00000492170	SLC24A4	Q8NFF2	622 aa		11.15	□□□□□ -0.62
MRPL55-231	ENST00000492170	OR1S1	Q8NH92	325 aa		11.15	□□□□□ -0.62
MRPL55-231	ENST00000492170	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.15	□□□□□ -0.62
MRPL55-231	ENST00000492170	DTD1	Q8TEA8	209 aa		11.15	□□□□□ -0.62
MRPL55-231	ENST00000492170	DCANP1	Q8TF63	244 aa		11.15	□□□□□ -0.62
MRPL55-231	ENST00000492170		Q8WTZ3	238 aa		11.15	□□□□□ -0.62
MRPL55-231	ENST00000492170	TMEM170A	Q8WVE7	144 aa		11.15	□□□□□ -0.62
MRPL55-231	ENST00000492170	RBKS	Q9H477	322 aa		11.15	□□□□□ -0.62
MRPL55-231	ENST00000492170	TRAV6	A0A075B6T7	132 aa		11.14	□□□□□ -0.63
MRPL55-231	ENST00000492170	IGLL5	B9A064	214 aa		11.14	□□□□□ -0.63
MRPL55-231	ENST00000492170	ADAP1	O75689	374 aa		11.14	□□□□□ -0.63
MRPL55-231	ENST00000492170	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
MRPL55-231	ENST00000492170	IGLC1	P0CG04	106 aa		11.14	□□□□□ -0.63
MRPL55-231	ENST00000492170	C4BPB	P20851	252 aa		11.14	□□□□□ -0.63
MRPL55-231	ENST00000492170	OR10J1	P30954	320 aa		11.14	□□□□□ -0.63
MRPL55-231	ENST00000492170	AP2S1	P53680	142 aa	Predicted RBP	11.14	□□□□□ -0.63
MRPL55-231	ENST00000492170	PRSS54	Q6PEW0	395 aa		11.14	□□□□□ -0.63
MRPL55-231	ENST00000492170		U3KQE9	123 aa		11.14	□□□□□ -0.63
MRPL55-231	ENST00000492170	HECTD4	Q9Y4D8	3996 aa		11.14	□□□□□ -0.63
MRPL55-231	ENST00000492170	HERC2	O95714	4834 aa		11.13	□□□□□ -0.63
MRPL55-231	ENST00000492170	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.13	□□□□□ -0.63
MRPL55-231	ENST00000492170	H2AFB2	P0C5Z0	115 aa		11.13	□□□□□ -0.63
MRPL55-231	ENST00000492170	RBMY1A1	P0DJD3	496 aa	Known RBP	11.13	□□□□□ -0.63
MRPL55-231	ENST00000492170	RBMY1C	P0DJD4	496 aa		11.13	□□□□□ -0.63
MRPL55-231	ENST00000492170	NPY1R	P25929	384 aa		11.13	□□□□□ -0.63
MRPL55-231	ENST00000492170	YPEL3	P61236	119 aa	Predicted RBP	11.13	□□□□□ -0.63
MRPL55-231	ENST00000492170	RBMY1F	Q15415	496 aa	Known RBP	11.13	□□□□□ -0.63
MRPL55-231	ENST00000492170	PSMG4	Q5JS54	123 aa		11.13	□□□□□ -0.63
MRPL55-231	ENST00000492170	ETFRF1	Q6IPR1	90 aa		11.13	□□□□□ -0.63
MRPL55-231	ENST00000492170	C16orf54	Q6UWD8	224 aa		11.13	□□□□□ -0.63
MRPL55-231	ENST00000492170	GLMP	Q8WWB7	406 aa		11.13	□□□□□ -0.63
MRPL55-231	ENST00000492170		U3KQ87	197 aa		11.13	□□□□□ -0.63
MRPL55-231	ENST00000492170	AGRN	O00468	2067 aa		11.12	□□□□□ -0.63
MRPL55-231	ENST00000492170	IL4	P05112	153 aa		11.12	□□□□□ -0.63
MRPL55-231	ENST00000492170	HLA-DMB	P28068	263 aa		11.12	□□□□□ -0.63
MRPL55-231	ENST00000492170	ATP5I	P56385	69 aa	Predicted RBP	11.12	□□□□□ -0.63
MRPL55-231	ENST00000492170	PRR20E	P86478	221 aa		11.12	□□□□□ -0.63
MRPL55-231	ENST00000492170	PRR20C	P86479	221 aa		11.12	□□□□□ -0.63
MRPL55-231	ENST00000492170	PRR20D	P86480	221 aa		11.12	□□□□□ -0.63
MRPL55-231	ENST00000492170	PRR20B	P86481	221 aa		11.12	□□□□□ -0.63
MRPL55-231	ENST00000492170	PRR20A	P86496	221 aa		11.12	□□□□□ -0.63
MRPL55-231	ENST00000492170	NOXA1	Q86UR1	476 aa		11.12	□□□□□ -0.63
MRPL55-231	ENST00000492170	OR4D5	Q8NGN0	318 aa		11.12	□□□□□ -0.63
MRPL55-231	ENST00000492170	ZNF431	Q8TF32	576 aa	Predicted RBP	11.12	□□□□□ -0.63
MRPL55-231	ENST00000492170	CLEC5A	Q9NY25	188 aa		11.12	□□□□□ -0.63
MRPL55-231	ENST00000492170	APLN	Q9ULZ1	77 aa		11.12	□□□□□ -0.63
MRPL55-231	ENST00000492170		X6R8D5	127 aa		11.12	□□□□□ -0.63
MRPL55-231	ENST00000492170	TRAV10	A0A0B4J240	114 aa		11.11	□□□□□ -0.63
MRPL55-231	ENST00000492170	MED6	O75586	246 aa		11.11	□□□□□ -0.63
MRPL55-231	ENST00000492170	IFNA21	P01568	189 aa		11.11	□□□□□ -0.63
MRPL55-231	ENST00000492170	SNRPD3	P62318	126 aa	Known RBP	11.11	□□□□□ -0.63
MRPL55-231	ENST00000492170	ID3	Q02535	119 aa		11.11	□□□□□ -0.63
MRPL55-231	ENST00000492170		Q6ZTC4	211 aa		11.11	□□□□□ -0.63
MRPL55-231	ENST00000492170	NRARP	Q7Z6K4	114 aa		11.11	□□□□□ -0.63
MRPL55-231	ENST00000492170	ENKUR	Q8TC29	256 aa		11.11	□□□□□ -0.63
MRPL55-231	ENST00000492170	RAB40C	Q96S21	281 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms