RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CLUHP3Q96NS8 147 aa6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 APLNQ9ULZ1 77 aa6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 ELOA3CA0A087WX78 387 aaPredicted RBP6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 PIGBOS1A0A0B4J2F0 54 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 IGHV4-28A0A0C4DH34 117 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 DUXBA0A1W2PPF3 345 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 FABP12A6NFH5 140 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 KNCNA6PVL3 124 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 H3BMM0 161 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 DEFB4AO15263 64 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 IFNA4P05014 189 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 IL4P05112 153 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 SRPXP78539 464 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 PRR20EP86478 221 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 PRR20CP86479 221 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 PRR20DP86480 221 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 PRR20BP86481 221 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 PRR20AP86496 221 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 DHRS2Q13268 280 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 GAMTQ14353 236 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 TMEM128Q5BJH2 165 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 C1orf194Q5T5A4 169 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 OR8G2PQ6IF36 304 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 LGI3Q8N145 548 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 C2CD4CQ8TF44 421 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 RBKSQ9H477 322 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 NRN1Q9NPD7 142 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 PRR13Q9NZ81 148 aa6.05□□□□□ -1.44
SMARCB1-207ENST00000491967 IGKV1OR2-108A0A075B7D4 117 aa6.04□□□□□ -1.44
SMARCB1-207ENST00000491967 PRSS46E5RG02 174 aa6.04□□□□□ -1.44
SMARCB1-207ENST00000491967 SOCS3O14543 225 aa6.04□□□□□ -1.44
SMARCB1-207ENST00000491967 IFNA10P01566 189 aa6.04□□□□□ -1.44
SMARCB1-207ENST00000491967 AKR1C4P17516 323 aa6.04□□□□□ -1.44
SMARCB1-207ENST00000491967 NKX2-1P43699 371 aaPredicted RBP6.04□□□□□ -1.44
SMARCB1-207ENST00000491967 ACTL10Q5JWF8 245 aa6.04□□□□□ -1.44
SMARCB1-207ENST00000491967 SIGLEC15Q6ZMC9 328 aa6.04□□□□□ -1.44
SMARCB1-207ENST00000491967 ZNF705AQ6ZN79 300 aaPredicted RBP6.04□□□□□ -1.44
SMARCB1-207ENST00000491967 OR51G1Q8NGK1 321 aa6.04□□□□□ -1.44
SMARCB1-207ENST00000491967 DTD1Q8TEA8 209 aa6.04□□□□□ -1.44
SMARCB1-207ENST00000491967 RNF125Q96EQ8 232 aa6.04□□□□□ -1.44
SMARCB1-207ENST00000491967 ACY3Q96HD9 319 aa6.04□□□□□ -1.44
SMARCB1-207ENST00000491967 NEU1Q99519 415 aa6.04□□□□□ -1.44
SMARCB1-207ENST00000491967 V9GYH0 126 aa6.04□□□□□ -1.44
SMARCB1-207ENST00000491967 DNAH6Q9C0G6 4158 aa6.04□□□□□ -1.44
SMARCB1-207ENST00000491967 PCLOQ9Y6V0 5065 aa6.04□□□□□ -1.44
SMARCB1-207ENST00000491967 ZNF705FA8MVS1 300 aaPredicted RBP6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 DEDDO75618 318 aa6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 ZNF705DP0CH99 300 aaPredicted RBP6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 ZNF705BP0CI00 300 aaPredicted RBP6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 HLA-DRB4P13762 266 aa6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 HLA-DMBP28068 263 aa6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 NUP62P37198 522 aaPredicted RBP6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 SNRPD3P62318 126 aaKnown RBP6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 ZNF90Q03938 601 aa6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 ZNF79Q15937 498 aa6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 PSMG4Q5JS54 123 aa6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 THAP8Q8NA92 274 aa6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 MCFD2Q8NI22 146 aa6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 C17orf77Q96MU5 243 aa6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 TRGV9Q99603 122 aa6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 SLC25A21Q9BQT8 299 aaPredicted RBP6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 RBM38Q9H0Z9 239 aaKnown RBP6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 MCUBQ9NWR8 336 aa6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 NDUFA13Q9P0J0 144 aa6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 FBXL17Q9UF56 701 aa6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 TBC1D24Q9ULP9 559 aa6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 HLA-DRB4X5D2U9 266 aa6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 DNAH10Q8IVF4 4471 aa6.03□□□□□ -1.44
SMARCB1-207ENST00000491967 SMIM9A6NGZ8 99 aa6.02□□□□□ -1.45
SMARCB1-207ENST00000491967 A6NHS1 94 aa6.02□□□□□ -1.45
SMARCB1-207ENST00000491967 A8MTW9 85 aa6.02□□□□□ -1.45
SMARCB1-207ENST00000491967 ANXA3P12429 323 aa6.02□□□□□ -1.45
SMARCB1-207ENST00000491967 FAUP35544 74 aaKnown RBP6.02□□□□□ -1.45
SMARCB1-207ENST00000491967 AP3S2P59780 193 aa6.02□□□□□ -1.45
SMARCB1-207ENST00000491967 NUTF2P61970 127 aaKnown RBP6.02□□□□□ -1.45
SMARCB1-207ENST00000491967 C12orf74Q32Q52 190 aa6.02□□□□□ -1.45
SMARCB1-207ENST00000491967 GDF5OSQ5U4N7 250 aa6.02□□□□□ -1.45
SMARCB1-207ENST00000491967 CCDC190Q86UF4 302 aa6.02□□□□□ -1.45
SMARCB1-207ENST00000491967 RNF126Q9BV68 326 aa6.02□□□□□ -1.45
SMARCB1-207ENST00000491967 C1QTNF4Q9BXJ3 329 aa6.02□□□□□ -1.45
SMARCB1-207ENST00000491967 WDR12Q9GZL7 423 aaKnown RBP6.02□□□□□ -1.45
SMARCB1-207ENST00000491967 SAV1Q9H4B6 383 aaPredicted RBP6.02□□□□□ -1.45
SMARCB1-207ENST00000491967 CLEC5AQ9NY25 188 aa6.02□□□□□ -1.45
SMARCB1-207ENST00000491967 PFDN2Q9UHV9 154 aa6.02□□□□□ -1.45
SMARCB1-207ENST00000491967 SLC45A2Q9UMX9 530 aa6.02□□□□□ -1.45
SMARCB1-207ENST00000491967 TMED3Q9Y3Q3 217 aa6.02□□□□□ -1.45
SMARCB1-207ENST00000491967 TRAV10A0A0B4J240 114 aa6.01□□□□□ -1.45
SMARCB1-207ENST00000491967 SNRPGP15A8MWD9 76 aa6.01□□□□□ -1.45
SMARCB1-207ENST00000491967 ZNF701M0R085 212 aaPredicted RBP6.01□□□□□ -1.45
SMARCB1-207ENST00000491967 ISLRO14498 428 aa6.01□□□□□ -1.45
SMARCB1-207ENST00000491967 SFT2D2O95562 160 aa6.01□□□□□ -1.45
SMARCB1-207ENST00000491967 CFDP00746 253 aaPredicted RBP6.01□□□□□ -1.45
SMARCB1-207ENST00000491967 FABP1P07148 127 aa6.01□□□□□ -1.45
SMARCB1-207ENST00000491967 PSMB3P49720 205 aa6.01□□□□□ -1.45
SMARCB1-207ENST00000491967 PAX9P55771 341 aa6.01□□□□□ -1.45
SMARCB1-207ENST00000491967 SPATA31B1PQ5VZV4 182 aa6.01□□□□□ -1.45
SMARCB1-207ENST00000491967 FOXI2Q6ZQN5 318 aa6.01□□□□□ -1.45
SMARCB1-207ENST00000491967 Q6ZTC4 211 aa6.01□□□□□ -1.45
SMARCB1-207ENST00000491967 TOMM5Q8N4H5 51 aa6.01□□□□□ -1.45
SMARCB1-207ENST00000491967 ZNF709Q8N972 641 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms