RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 S100A12P80511 92 aa10.88□□□□□ -0.67
SMPD4-219ENST00000491128 PEA15Q15121 130 aa10.88□□□□□ -0.67
SMPD4-219ENST00000491128 SIGLECL1Q8N7X8 197 aa10.88□□□□□ -0.67
SMPD4-219ENST00000491128 NUDT19A8MXV4 375 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 H3BTX0 84 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 COX7A2P2O60397 106 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 OR7C2O60412 319 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 RHOBP62745 196 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 CHRDL1Q9BU40 450 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 KLK15Q9H2R5 256 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 DNAJC4Q9NNZ3 241 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 PITPNC1Q9UKF7 332 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 SETXQ7Z333 2677 aaKnown RBP10.87□□□□□ -0.67
SMPD4-219ENST00000491128 LOC102723971A0A1B0GUV8 181 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 PSMB11A5LHX3 300 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 CLN5O75503 358 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 STAG3L2P0CL84 134 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 STAG3L3P0CL85 134 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 PYYP10082 97 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 BCL2P10415 239 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 GPR183P32249 361 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 AKR1C3P42330 323 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 CST9LP1Q5W188 147 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 LINC00305Q7Z4B0 112 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 FAM110DQ8TAY7 271 aaPredicted RBP10.87□□□□□ -0.67
SMPD4-219ENST00000491128 ZNF503Q96F45 646 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 C21orf62Q9NYP8 219 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 FUT9Q9Y231 359 aa10.87□□□□□ -0.67
SMPD4-219ENST00000491128 SRP14P37108 136 aaKnown RBP10.86□□□□□ -0.67
SMPD4-219ENST00000491128 ATP5G3P48201 142 aa10.86□□□□□ -0.67
SMPD4-219ENST00000491128 C10orf113Q5VZT2 155 aa10.86□□□□□ -0.67
SMPD4-219ENST00000491128 Q6YL49 198 aa10.86□□□□□ -0.67
SMPD4-219ENST00000491128 OR51G1Q8NGK1 321 aa10.86□□□□□ -0.67
SMPD4-219ENST00000491128 BTBD17A6NE02 478 aa10.86□□□□□ -0.67
SMPD4-219ENST00000491128 IGHV3-11P01762 117 aa10.86□□□□□ -0.67
SMPD4-219ENST00000491128 RD3LP0DJH9 198 aa10.86□□□□□ -0.67
SMPD4-219ENST00000491128 COMMD1Q8N668 190 aa10.86□□□□□ -0.67
SMPD4-219ENST00000491128 TRGV9Q99603 122 aa10.86□□□□□ -0.67
SMPD4-219ENST00000491128 KCNIP2Q9NS61 270 aa10.86□□□□□ -0.67
SMPD4-219ENST00000491128 IGHG2P01859 326 aa10.85□□□□□ -0.67
SMPD4-219ENST00000491128 CLEC3BP05452 202 aa10.85□□□□□ -0.67
SMPD4-219ENST00000491128 SRP19P09132 144 aaKnown RBP10.85□□□□□ -0.67
SMPD4-219ENST00000491128 CD81P60033 236 aa10.85□□□□□ -0.67
SMPD4-219ENST00000491128 CLEC19AQ6UXS0 136 aa10.85□□□□□ -0.67
SMPD4-219ENST00000491128 SLC35B3Q9H1N7 401 aa10.85□□□□□ -0.67
SMPD4-219ENST00000491128 HIVEP1P15822 2718 aa10.85□□□□□ -0.67
SMPD4-219ENST00000491128 HIVEP2P31629 2446 aa10.85□□□□□ -0.67
SMPD4-219ENST00000491128 MFAP4P55083 255 aa10.85□□□□□ -0.67
SMPD4-219ENST00000491128 ZNF506Q5JVG8 444 aa10.85□□□□□ -0.67
SMPD4-219ENST00000491128 OR5AU1Q8NGC0 362 aa10.85□□□□□ -0.67
SMPD4-219ENST00000491128 OR4F5Q8NH21 305 aa10.85□□□□□ -0.67
SMPD4-219ENST00000491128 OR5B12Q96R08 314 aa10.85□□□□□ -0.67
SMPD4-219ENST00000491128 OR4F4Q96R69 305 aa10.85□□□□□ -0.67
SMPD4-219ENST00000491128 SLC25A2Q9BXI2 301 aa10.85□□□□□ -0.67
SMPD4-219ENST00000491128 GNB4Q9HAV0 340 aa10.85□□□□□ -0.67
SMPD4-219ENST00000491128 YTHDF2Q9Y5A9 579 aaKnown RBP10.85□□□□□ -0.67
SMPD4-219ENST00000491128 PUS1Q9Y606 427 aaKnown RBP eCLIP10.85□□□□□ -0.67
SMPD4-219ENST00000491128 PPP5D1E7EU14 171 aa10.84□□□□□ -0.67
SMPD4-219ENST00000491128 TRGV3P03979 118 aa10.84□□□□□ -0.67
SMPD4-219ENST00000491128 IL4P05112 153 aa10.84□□□□□ -0.67
SMPD4-219ENST00000491128 GCHFRP30047 84 aa10.84□□□□□ -0.67
SMPD4-219ENST00000491128 ADMP35318 185 aa10.84□□□□□ -0.67
SMPD4-219ENST00000491128 NPBWR1P48145 328 aa10.84□□□□□ -0.67
SMPD4-219ENST00000491128 THYN1Q9P016 225 aa10.84□□□□□ -0.67
SMPD4-219ENST00000491128 CTSGP08311 255 aa10.84□□□□□ -0.67
SMPD4-219ENST00000491128 ZNF674Q2M3X9 581 aa10.84□□□□□ -0.67
SMPD4-219ENST00000491128 TMEM88Q6PEY1 159 aa10.84□□□□□ -0.67
SMPD4-219ENST00000491128 C16orf82Q7Z2V1 217 aa10.84□□□□□ -0.67
SMPD4-219ENST00000491128 OR1L6Q8NGR2 347 aa10.84□□□□□ -0.67
SMPD4-219ENST00000491128 MLXQ9UH92 298 aa10.84□□□□□ -0.67
SMPD4-219ENST00000491128 VPREB3Q9UKI3 123 aa10.84□□□□□ -0.67
SMPD4-219ENST00000491128 CXorf1O96002 111 aa10.83□□□□□ -0.68
SMPD4-219ENST00000491128 TRBV12-3P01733 135 aa10.83□□□□□ -0.68
SMPD4-219ENST00000491128 PF4V1P10720 104 aa10.83□□□□□ -0.68
SMPD4-219ENST00000491128 TPPP2P59282 170 aa10.83□□□□□ -0.68
SMPD4-219ENST00000491128 FAM167A-AS1Q96KT0 104 aa10.83□□□□□ -0.68
SMPD4-219ENST00000491128 CCDC140Q96MF4 163 aa10.83□□□□□ -0.68
SMPD4-219ENST00000491128 C11orf94C9JXX5 98 aa10.83□□□□□ -0.68
SMPD4-219ENST00000491128 PSMB3P49720 205 aa10.83□□□□□ -0.68
SMPD4-219ENST00000491128 BPIFB3P59826 476 aa10.83□□□□□ -0.68
SMPD4-219ENST00000491128 SELENOTP62341 195 aa10.83□□□□□ -0.68
SMPD4-219ENST00000491128 SOHLH1Q5JUK2 328 aa10.83□□□□□ -0.68
SMPD4-219ENST00000491128 RPUSD4Q96CM3 377 aaKnown RBP10.83□□□□□ -0.68
SMPD4-219ENST00000491128 SEC11CQ9BY50 192 aa10.83□□□□□ -0.68
SMPD4-219ENST00000491128 VAX2Q9UIW0 290 aa10.83□□□□□ -0.68
SMPD4-219ENST00000491128 IGHV3OR16-13A0A075B7E8 117 aa10.82□□□□□ -0.68
SMPD4-219ENST00000491128 TRBV9A0A0B4J1U6 114 aa10.82□□□□□ -0.68
SMPD4-219ENST00000491128 IGHV3-74A0A0B4J1X5 117 aa10.82□□□□□ -0.68
SMPD4-219ENST00000491128 HYPMO75409 117 aa10.82□□□□□ -0.68
SMPD4-219ENST00000491128 PPIFP30405 207 aaKnown RBP10.82□□□□□ -0.68
SMPD4-219ENST00000491128 MEF2BQ02080 365 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-219ENST00000491128 USF2Q15853 346 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-219ENST00000491128 KHDC3LQ587J8 217 aa10.82□□□□□ -0.68
SMPD4-219ENST00000491128 C19orf54Q5BKX5 351 aa10.82□□□□□ -0.68
SMPD4-219ENST00000491128 BLNKQ8WV28 456 aa10.82□□□□□ -0.68
SMPD4-219ENST00000491128 ZNF207O43670 478 aaKnown RBP10.82□□□□□ -0.68
SMPD4-219ENST00000491128 IGF1P05019 195 aa10.82□□□□□ -0.68
SMPD4-219ENST00000491128 C8orf88P0DMB2 117 aa10.82□□□□□ -0.68
SMPD4-219ENST00000491128 MEOX2P50222 304 aa10.82□□□□□ -0.68
SMPD4-219ENST00000491128 RBMS3Q6XE24 437 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms